© 2022 - Robin Ohm - Utrecht University - The Netherlands
Built with Python Django and Wagtail
| Protein ID | Ani_SJS100_1|g4668.t1 |
| Gene name | |
| Location | scaffold_024:163099..164620 |
| Strand | - |
| Gene length (bp) | 1521 |
| Transcript length (bp) | 1470 |
| Coding sequence length (bp) | 1470 |
| Protein length (aa) | 490 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF07690 | MFS_1 | Major Facilitator Superfamily | 7.6E-35 | 62 | 437 |
| PF00083 | Sugar_tr | Sugar (and other) transporter | 1.3E-11 | 85 | 229 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0055085 | transmembrane transport | Yes |
| GO:0016021 | integral component of membrane | Yes |
| GO:0022857 | transmembrane transporter activity | Yes |
| GO:0110165 | cellular anatomical entity | No |
| GO:0008150 | biological_process | No |
| GO:0005575 | cellular_component | No |
| GO:0031224 | intrinsic component of membrane | No |
| GO:0051234 | establishment of localization | No |
| GO:0051179 | localization | No |
| GO:0009987 | cellular process | No |
| GO:0005215 | transporter activity | No |
| GO:0006810 | transport | No |
| GO:0003674 | molecular_function | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 65 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 48 | 70 | 22 |
| 2 | 85 | 107 | 22 |
| 3 | 114 | 131 | 17 |
| 4 | 141 | 163 | 22 |
| 5 | 175 | 197 | 22 |
| 6 | 212 | 234 | 22 |
| 7 | 286 | 308 | 22 |
| 8 | 318 | 340 | 22 |
| 9 | 361 | 380 | 19 |
| 10 | 384 | 406 | 22 |
| 11 | 419 | 441 | 22 |
| 12 | 451 | 473 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS100_1|g4668.t1 MVRIWPKSAHDQPSDLEKAPPSRDPEYQVKWDPDDPLNPQNWPVRYKWWVTVQLGMLALAGSLGSSITTSADDTI AEYIGVSSEVAVLDVSLYILGFVLGPIIWAPLSEVWGRRVSMLPALFCLALFDIGTATSRNAPAVFLTRFFAGFF GSAPISNVTAALGDMWSKETRGTAVSIYAIAVNGGPDLGPIIGAAIMANSHLGWRWTAYIHAIWVFATFIMAFFF LPELYPLVLLKRKAQNLRKSTNDSRYWHPHEHLHLSVQSIVTKQLARPLRMLCTEPIVTCIAFYAAFVYAVMYLT LEVFPIAFEELRGWSPVVGALPFLALLIGVILSTGINIYNQFRYNRISAAANGAPVPEARLPPMMFGGVILVLGL FWFAWTATPAYHWILPCLAAFCIGAGFNCIFQQCLNFLIDVYRVYAASSTAAVTFLRSIMAAGLPLAAKPMIRAL GIGPAISIIGAVAAVLLPVPFLFVRYGPALRRASKMIDG* |
| Coding | >Ani_SJS100_1|g4668.t1 ATGGTCCGCATATGGCCCAAATCTGCCCATGACCAGCCATCGGACCTGGAAAAAGCGCCTCCTTCGCGCGACCCC GAATACCAGGTGAAATGGGACCCTGACGATCCCTTGAATCCGCAAAACTGGCCAGTGCGGTACAAATGGTGGGTG ACGGTGCAGTTGGGCATGCTCGCCCTGGCCGGTAGTTTGGGCTCCAGCATCACCACTTCTGCCGATGACACCATC GCCGAGTATATTGGCGTCAGTAGCGAGGTCGCTGTTCTCGATGTCTCTCTTTACATTCTCGGCTTCGTCCTCGGC CCCATCATCTGGGCTCCCCTCTCCGAAGTCTGGGGTCGGCGCGTCAGCATGCTCCCAGCCCTCTTCTGCCTGGCC CTCTTCGACATCGGCACCGCGACCAGTCGCAACGCCCCTGCCGTCTTCCTGACGCGCTTCTTCGCCGGTTTCTTT GGCTCCGCGCCCATCAGCAACGTCACCGCTGCCCTCGGCGACATGTGGAGCAAAGAAACACGAGGCACAGCTGTC AGCATCTACGCGATCGCCGTAAATGGCGGTCCAGACCTGGGCCCCATCATCGGCGCGGCCATCATGGCGAACTCA CATCTCGGCTGGCGCTGGACCGCATACATCCACGCGATCTGGGTCTTCGCGACCTTTATCATGGCCTTTTTCTTC CTCCCGGAACTCTACCCGCTCGTGCTGCTGAAACGCAAAGCGCAAAACCTCCGCAAATCCACCAACGACAGCCGA TACTGGCACCCCCATGAACACCTGCACCTGTCTGTCCAATCTATCGTCACGAAACAGCTTGCTCGCCCGCTTCGC ATGCTCTGCACTGAACCTATCGTCACTTGCATCGCCTTTTACGCCGCCTTCGTCTACGCAGTCATGTACCTCACC CTCGAAGTCTTCCCTATCGCCTTCGAAGAACTTCGCGGCTGGTCCCCTGTCGTCGGGGCGCTGCCCTTCCTCGCT CTCCTGATCGGTGTCATTCTATCCACCGGAATCAACATCTACAACCAGTTCCGCTATAACCGCATCTCCGCGGCC GCGAACGGCGCTCCCGTCCCTGAGGCCAGGTTACCGCCCATGATGTTTGGCGGTGTTATTCTTGTCCTGGGGCTA TTCTGGTTCGCCTGGACAGCTACCCCCGCTTATCACTGGATCTTGCCGTGCTTGGCAGCGTTCTGTATTGGAGCA GGGTTCAATTGTATTTTCCAGCAATGTTTGAATTTCCTGATTGACGTGTATCGCGTGTATGCAGCTAGTTCAACG GCGGCTGTTACGTTCCTGAGAAGTATCATGGCGGCGGGGTTGCCGTTGGCGGCGAAGCCGATGATCAGGGCGTTG GGGATTGGGCCGGCGATCTCGATTATTGGCGCTGTGGCGGCGGTGTTGTTGCCCGTGCCGTTTTTGTTTGTGAGG TATGGGCCGGCGTTGAGGAGGGCGTCGAAAATGATTGATGGGTGA |
| Transcript | >Ani_SJS100_1|g4668.t1 ATGGTCCGCATATGGCCCAAATCTGCCCATGACCAGCCATCGGACCTGGAAAAAGCGCCTCCTTCGCGCGACCCC GAATACCAGGTGAAATGGGACCCTGACGATCCCTTGAATCCGCAAAACTGGCCAGTGCGGTACAAATGGTGGGTG ACGGTGCAGTTGGGCATGCTCGCCCTGGCCGGTAGTTTGGGCTCCAGCATCACCACTTCTGCCGATGACACCATC GCCGAGTATATTGGCGTCAGTAGCGAGGTCGCTGTTCTCGATGTCTCTCTTTACATTCTCGGCTTCGTCCTCGGC CCCATCATCTGGGCTCCCCTCTCCGAAGTCTGGGGTCGGCGCGTCAGCATGCTCCCAGCCCTCTTCTGCCTGGCC CTCTTCGACATCGGCACCGCGACCAGTCGCAACGCCCCTGCCGTCTTCCTGACGCGCTTCTTCGCCGGTTTCTTT GGCTCCGCGCCCATCAGCAACGTCACCGCTGCCCTCGGCGACATGTGGAGCAAAGAAACACGAGGCACAGCTGTC AGCATCTACGCGATCGCCGTAAATGGCGGTCCAGACCTGGGCCCCATCATCGGCGCGGCCATCATGGCGAACTCA CATCTCGGCTGGCGCTGGACCGCATACATCCACGCGATCTGGGTCTTCGCGACCTTTATCATGGCCTTTTTCTTC CTCCCGGAACTCTACCCGCTCGTGCTGCTGAAACGCAAAGCGCAAAACCTCCGCAAATCCACCAACGACAGCCGA TACTGGCACCCCCATGAACACCTGCACCTGTCTGTCCAATCTATCGTCACGAAACAGCTTGCTCGCCCGCTTCGC ATGCTCTGCACTGAACCTATCGTCACTTGCATCGCCTTTTACGCCGCCTTCGTCTACGCAGTCATGTACCTCACC CTCGAAGTCTTCCCTATCGCCTTCGAAGAACTTCGCGGCTGGTCCCCTGTCGTCGGGGCGCTGCCCTTCCTCGCT CTCCTGATCGGTGTCATTCTATCCACCGGAATCAACATCTACAACCAGTTCCGCTATAACCGCATCTCCGCGGCC GCGAACGGCGCTCCCGTCCCTGAGGCCAGGTTACCGCCCATGATGTTTGGCGGTGTTATTCTTGTCCTGGGGCTA TTCTGGTTCGCCTGGACAGCTACCCCCGCTTATCACTGGATCTTGCCGTGCTTGGCAGCGTTCTGTATTGGAGCA GGGTTCAATTGTATTTTCCAGCAATGTTTGAATTTCCTGATTGACGTGTATCGCGTGTATGCAGCTAGTTCAACG GCGGCTGTTACGTTCCTGAGAAGTATCATGGCGGCGGGGTTGCCGTTGGCGGCGAAGCCGATGATCAGGGCGTTG GGGATTGGGCCGGCGATCTCGATTATTGGCGCTGTGGCGGCGGTGTTGTTGCCCGTGCCGTTTTTGTTTGTGAGG TATGGGCCGGCGTTGAGGAGGGCGTCGAAAATGATTGATGGGTGA |
| Gene | >Ani_SJS100_1|g4668.t1 ATGGTCCGCATATGGCCCAAATCTGCCCATGACCAGCCATCGGACCTGGAAAAAGCGCCTCCTTCGCGCGACCCC GAATACCAGGTGAAATGGGACCCTGACGATCCCTTGAATCCGCAAAACTGGCCAGTGCGGTACAAATGGTGGGTG ACGGTGCAGTTGGGCATGCTCGCCCTGGCCGGTAGTTTGGGCTCCAGCATCACCACTTCTGCCGATGACACCATC GCCGAGTATATTGGCGTCAGTAGCGAGGTCGCTGTTCTCGATGTCTCTCTTTACATGTTAGTGTTTCCGTAGCGA TCTTGTAAAATATCGACACTGACCAATCCCAGTCTCGGCTTCGTCCTCGGCCCCATCATCTGGGCTCCCCTCTCC GAAGTCTGGGGTCGGCGCGTCAGCATGCTCCCAGCCCTCTTCTGCCTGGCCCTCTTCGACATCGGCACCGCGACC AGTCGCAACGCCCCTGCCGTCTTCCTGACGCGCTTCTTCGCCGGTTTCTTTGGCTCCGCGCCCATCAGCAACGTC ACCGCTGCCCTCGGCGACATGTGGAGCAAAGAAACACGAGGCACAGCTGTCAGCATCTACGCGATCGCCGTAAAT GGCGGTCCAGACCTGGGCCCCATCATCGGCGCGGCCATCATGGCGAACTCACATCTCGGCTGGCGCTGGACCGCA TACATCCACGCGATCTGGGTCTTCGCGACCTTTATCATGGCCTTTTTCTTCCTCCCGGAACTCTACCCGCTCGTG CTGCTGAAACGCAAAGCGCAAAACCTCCGCAAATCCACCAACGACAGCCGATACTGGCACCCCCATGAACACCTG CACCTGTCTGTCCAATCTATCGTCACGAAACAGCTTGCTCGCCCGCTTCGCATGCTCTGCACTGAACCTATCGTC ACTTGCATCGCCTTTTACGCCGCCTTCGTCTACGCAGTCATGTACCTCACCCTCGAAGTCTTCCCTATCGCCTTC GAAGAACTTCGCGGCTGGTCCCCTGTCGTCGGGGCGCTGCCCTTCCTCGCTCTCCTGATCGGTGTCATTCTATCC ACCGGAATCAACATCTACAACCAGTTCCGCTATAACCGCATCTCCGCGGCCGCGAACGGCGCTCCCGTCCCTGAG GCCAGGTTACCGCCCATGATGTTTGGCGGTGTTATTCTTGTCCTGGGGCTATTCTGGTTCGCCTGGACAGCTACC CCCGCTTATCACTGGATCTTGCCGTGCTTGGCAGCGTTCTGTATTGGAGCAGGGTTCAATTGTATTTTCCAGCAA TGTTTGAATTTCCTGATTGACGTGTATCGCGTGTATGCAGCTAGTTCAACGGCGGCTGTTACGTTCCTGAGAAGT ATCATGGCGGCGGGGTTGCCGTTGGCGGCGAAGCCGATGATCAGGGCGTTGGGGATTGGGCCGGCGATCTCGATT ATTGGCGCTGTGGCGGCGGTGTTGTTGCCCGTGCCGTTTTTGTTTGTGAGGTATGGGCCGGCGTTGAGGAGGGCG TCGAAAATGATTGATGGGTGA |