Fungal Genomics

at Utrecht University

General Properties

Protein ID	Ani_SJS100_1\|g4634.t1
Gene name
Location	scaffold_024:59905..60734
Strand	+
Gene length (bp)	829
Transcript length (bp)	708
Coding sequence length (bp)	708
Protein length (aa)	236

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF00190	Cupin_1	Cupin	1.1E-13	72	200

GO

(None)

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
Yes	1 - 24	0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Ani_SJS100_1\|g4634.t1 MFLSFSLYLDLTVLLALVLQAGAVPHPIVKRSNSDLSLTAQLRLADTAIERYKLLPNDSDFVFNFTGNEEIPVAT SQNWPALVGVGAAISMSQLPACSMSFLHLHPRATELFALNSGHILSEMVPQAGVLDSNNSQRVIRTDLRPGQVTI YPAGSFHTQVNPECEPANFTAAFTSDEFAVSLVAEQLFSFSDGVIARTFGQSIAGEDIEKVRNAIPSNMAIKVDE CLAKCGSEKR*
Coding	>Ani_SJS100_1\|g4634.t1 ATGTTTTTGTCCTTCTCCCTGTACTTGGATCTTACAGTTCTACTTGCTCTCGTTCTCCAAGCGGGAGCAGTGCCG CACCCGATAGTTAAGCGCTCAAATTCCGATCTCAGCTTAACGGCCCAACTTCGTCTTGCCGATACGGCCATTGAG CGTTACAAGCTGCTTCCCAATGACTCCGACTTCGTTTTCAATTTCACCGGCAATGAAGAAATCCCAGTAGCTACA AGCCAGAATTGGCCCGCTCTCGTTGGTGTCGGGGCAGCTATCAGCATGTCGCAACTGCCAGCATGCAGTATGAGC TTCCTCCATCTCCACCCCCGCGCCACCGAACTATTTGCTCTGAATTCCGGCCATATTCTCTCCGAAATGGTTCCT CAGGCTGGAGTTCTAGACAGCAACAATAGTCAGCGAGTTATTCGGACGGACCTGCGGCCCGGTCAAGTGACCATC TACCCGGCAGGATCATTCCACACGCAAGTGAACCCGGAGTGTGAGCCAGCAAACTTTACAGCTGCGTTTACATCA GATGAATTTGCTGTGAGTCTGGTGGCAGAACAGCTATTCTCCTTCAGTGATGGGGTTATTGCACGGACCTTTGGG CAGAGTATTGCCGGGGAGGACATCGAGAAGGTTCGGAATGCCATTCCATCAAATATGGCGATCAAAGTGGATGAG TGCTTGGCGAAATGTGGATCGGAGAAGCGGTAA
Transcript	>Ani_SJS100_1\|g4634.t1 ATGTTTTTGTCCTTCTCCCTGTACTTGGATCTTACAGTTCTACTTGCTCTCGTTCTCCAAGCGGGAGCAGTGCCG CACCCGATAGTTAAGCGCTCAAATTCCGATCTCAGCTTAACGGCCCAACTTCGTCTTGCCGATACGGCCATTGAG CGTTACAAGCTGCTTCCCAATGACTCCGACTTCGTTTTCAATTTCACCGGCAATGAAGAAATCCCAGTAGCTACA AGCCAGAATTGGCCCGCTCTCGTTGGTGTCGGGGCAGCTATCAGCATGTCGCAACTGCCAGCATGCAGTATGAGC TTCCTCCATCTCCACCCCCGCGCCACCGAACTATTTGCTCTGAATTCCGGCCATATTCTCTCCGAAATGGTTCCT CAGGCTGGAGTTCTAGACAGCAACAATAGTCAGCGAGTTATTCGGACGGACCTGCGGCCCGGTCAAGTGACCATC TACCCGGCAGGATCATTCCACACGCAAGTGAACCCGGAGTGTGAGCCAGCAAACTTTACAGCTGCGTTTACATCA GATGAATTTGCTGTGAGTCTGGTGGCAGAACAGCTATTCTCCTTCAGTGATGGGGTTATTGCACGGACCTTTGGG CAGAGTATTGCCGGGGAGGACATCGAGAAGGTTCGGAATGCCATTCCATCAAATATGGCGATCAAAGTGGATGAG TGCTTGGCGAAATGTGGATCGGAGAAGCGGTAA
Gene	>Ani_SJS100_1\|g4634.t1 ATGTTTTTGTCCTTCTCCCTGTACTTGGATCTTACAGTTCTACTTGCTCTCGTTCTCCAAGCGGGAGCAGTGCCG CACCCGATAGTTAAGCGCTCAAATTCCGATCTCAGCTTAACGGCCCAACTTCGTCTTGCCGATACGTAAGTCAAC AGCCTATCCCAGACTGCAATCTTCTAATGAGCTAACATAAACGATTATATAAGGGCCATTGAGCGTTACAAGCTG CTTCCCAATGACTCCGACTTCGTTTTCAATTTCACCGGCAATGAAGAAATCCCAGTAGCTACAAGCCAGAATTGG CCCGCTCTCGTTGGTGTCGGGGCAGCTATCAGCATGTCGCAACTGCCAGGTAGGAGAACATGCAATCTATCATTT AGCCAAAGACTAACCCCGAGACATCCAAATAGCATGCAGTATGAGCTTCCTCCATCTCCACCCCCGCGCCACCGA ACTATTTGCTCTGAATTCCGGCCATATTCTCTCCGAAATGGTTCCTCAGGCTGGAGTTCTAGACAGCAACAATAG TCAGCGAGTTATTCGGACGGACCTGCGGCCCGGTCAAGTGACCATCTACCCGGCAGGATCATTCCACACGCAAGT GAACCCGGAGTGTGAGCCAGCAAACTTTACAGCTGCGTTTACATCAGATGAATTTGCTGTGAGTCTGGTGGCAGA ACAGCTATTCTCCTTCAGTGATGGGGTTATTGCACGGACCTTTGGGCAGAGTATTGCCGGGGAGGACATCGAGAA GGTTCGGAATGCCATTCCATCAAATATGGCGATCAAAGTGGATGAGTGCTTGGCGAAATGTGGATCGGAGAAGCG GTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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