© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ani_SJS100_1|g4619.t1 |
| Gene name | |
| Location | scaffold_024:15874..17131 |
| Strand | + |
| Gene length (bp) | 1257 |
| Transcript length (bp) | 837 |
| Coding sequence length (bp) | 837 |
| Protein length (aa) | 279 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF20237 | DUF6594 | Family of unknown function (DUF6594) | 3.7E-54 | 9 | 268 |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 12 | 0.45 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 201 | 223 | 22 |
| 2 | 227 | 249 | 22 |
| 3 | 256 | 273 | 17 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS100_1|g4619.t1 MSTPISKGYDRLAALMARDPGSSIYRSFAKLNAKNLLYLQAEIAYIQIDLQDIIKEDGQSEDKVSFPFSVWAMKN SEDPVQWKKFLEARKLLKEYNTALLHQAQLLRLNAPEKADLEVFKAWLREEESRNMWFSPPDQWGGENEMDLVAL NSRHEETDRFTRFVYTRVLSWFHRMVGVNDTKRKDIESGVWYYNDRTIKSWTYILSLFISGLLPATSMIVLYFLK DPAAILITICVYDMVFVLVMGLMVKARRVEIFAAATAFAAVQVTMITAGKSNS* |
| Coding | >Ani_SJS100_1|g4619.t1 ATGTCGACTCCCATATCCAAAGGCTACGATAGACTGGCCGCTCTAATGGCCCGCGACCCTGGGTCCTCCATCTAT CGAAGTTTTGCCAAGCTTAATGCCAAGAACCTGCTCTATCTTCAGGCAGAGATTGCCTACATTCAAATTGACCTC CAAGATATCATCAAAGAGGACGGTCAATCCGAGGATAAAGTCTCATTCCCGTTCTCAGTCTGGGCCATGAAGAAT TCAGAGGATCCGGTTCAATGGAAGAAGTTCCTCGAAGCACGCAAGTTATTAAAAGAGTATAACACAGCCCTACTC CATCAAGCTCAACTTCTCCGACTCAACGCGCCCGAGAAAGCCGACCTAGAGGTGTTCAAAGCATGGCTGAGAGAA GAAGAAAGCAGAAATATGTGGTTTTCGCCCCCGGACCAATGGGGCGGAGAGAACGAGATGGACTTGGTAGCATTG AACAGTCGACATGAGGAGACGGATCGTTTCACTCGTTTTGTCTATACACGAGTCCTTTCGTGGTTCCATCGGATG GTGGGGGTCAATGATACCAAACGAAAAGATATCGAATCTGGCGTCTGGTACTACAATGACCGGACAATCAAATCT TGGACGTATATACTCAGTTTGTTTATCTCAGGGTTGCTTCCTGCAACCTCGATGATAGTGTTGTATTTCCTGAAG GATCCGGCGGCAATATTAATCACTATCTGCGTGTATGATATGGTATTTGTTCTGGTAATGGGGTTGATGGTTAAG GCGAGACGCGTGGAGATCTTTGCTGCCGCCACAGCGTTCGCTGCCGTGCAGGTGACTATGATTACGGCTGGTAAG AGCAATTCGTGA |
| Transcript | >Ani_SJS100_1|g4619.t1 ATGTCGACTCCCATATCCAAAGGCTACGATAGACTGGCCGCTCTAATGGCCCGCGACCCTGGGTCCTCCATCTAT CGAAGTTTTGCCAAGCTTAATGCCAAGAACCTGCTCTATCTTCAGGCAGAGATTGCCTACATTCAAATTGACCTC CAAGATATCATCAAAGAGGACGGTCAATCCGAGGATAAAGTCTCATTCCCGTTCTCAGTCTGGGCCATGAAGAAT TCAGAGGATCCGGTTCAATGGAAGAAGTTCCTCGAAGCACGCAAGTTATTAAAAGAGTATAACACAGCCCTACTC CATCAAGCTCAACTTCTCCGACTCAACGCGCCCGAGAAAGCCGACCTAGAGGTGTTCAAAGCATGGCTGAGAGAA GAAGAAAGCAGAAATATGTGGTTTTCGCCCCCGGACCAATGGGGCGGAGAGAACGAGATGGACTTGGTAGCATTG AACAGTCGACATGAGGAGACGGATCGTTTCACTCGTTTTGTCTATACACGAGTCCTTTCGTGGTTCCATCGGATG GTGGGGGTCAATGATACCAAACGAAAAGATATCGAATCTGGCGTCTGGTACTACAATGACCGGACAATCAAATCT TGGACGTATATACTCAGTTTGTTTATCTCAGGGTTGCTTCCTGCAACCTCGATGATAGTGTTGTATTTCCTGAAG GATCCGGCGGCAATATTAATCACTATCTGCGTGTATGATATGGTATTTGTTCTGGTAATGGGGTTGATGGTTAAG GCGAGACGCGTGGAGATCTTTGCTGCCGCCACAGCGTTCGCTGCCGTGCAGGTGACTATGATTACGGCTGGTAAG AGCAATTCGTGA |
| Gene | >Ani_SJS100_1|g4619.t1 ATGTCGACTCCCATATCCAAAGGCTACGATAGACTGGCCGCTCTAATGGCCCGCGACCCTGGGTCCTCCATCTAT CGAAGTTTTGCCAAGCTTAATGCCAAGAACCTGCTCTATCTTCAGGCAGAGATTGCCTACATTCAAATTGACCTC CAAGATATCATCAAAGAGGACGGTCAATCCGAGGATAAAGTCTCATTCCCGTTCTCAGTCTGGGCCATGAAGAAT TCAGAGGATCCGGTTCAATGGAAGAAGTTCCTCGAAGCACGCAAGTTATTAAAAGAGTATAGTACGTCCCCAATC TTCCTTTCTTTCTTTTTCTATCTTGAAAGTCATGTACTATCCTATTCTTTTCAATGTTTTCGTCTCCTACTTCCA GTATTCCCCGTTCAAAGCTTGCGCAAAAATCTTCTCACCCACCACGGATGCACGGGGTCTGCTGGTAATTATATA TACAAAATATTAGCTTTCATTTTATCCTACTGCAAACATTTCACTAACAGAATTAAACTGTAGACACAGCCCTAC TCCATCAAGCTCAACTTCTCCGACTCAACGCGCCCGAGAAAGCCGACCTAGAGGTGTTCAAAGCATGGCTGAGAG AAGAAGAAAGCAGAAATATGTGGTTTTCGCCCCCGGACCAATGGGGCGGAGAGAACGAGATGGACTTGGTAGCAT TGAACAGTCGACATGAGGAGACGGATCGTTTCACTCGTTTTGTCTATACACGAGTCCTTTCGTGGTTCCATCGGA TGGTGGGGGTCAATGATACCGTACGTTATGCTCTTCTTATCCTTCCGTACCCTGTCATTGAGCCCTGCCCTGATA GTAACTAACCTTATCTACTAACGCACACATTCTACACTAGAAACGAAAAGATATCGAATCTGGCGTCTGGTACTA CAATGACCGGACAATCAAATCTTGGACGTATATACTCAGTTTGTTTATCTCAGGGTTGCTTCCTGCAACCTCGAT GATAGTGTTGTATTTCCTGAAGGATCCGGCGGCAATATTAATCACTATCTGCGTGTATGATATGGTATTTGTTCT GGTAATGGGGTTGATGGTTAAGGCGAGACGCGTGGAGATCTTTGCTGCCGCCACAGCGTAGGTTTCCCTCAGATT CAGATTCTGTCCTCTCTCTCCTTTGTCTCCGTTTCCTCGTGAAACATGGCGCTTGATTTGCTGTGCACTAACGGG ACTAGGTTCGCTGCCGTGCAGGTGACTATGATTACGGCTGGTAAGAGCAATTCGTGA |