Fungal Genomics

at Utrecht University

General Properties

Protein IDAni_SJS100_1|g4589.t1
Gene name
Locationscaffold_023:305905..306298
Strand-
Gene length (bp)393
Transcript length (bp)393
Coding sequence length (bp)393
Protein length (aa) 131

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF12680 SnoaL_2 SnoaL-like domain 6.5E-11 15 117
PF13577 SnoaL_4 SnoaL-like domain 7.4E-06 7 86

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)		 D score
(significance: > 0.45)
No 1 - 44 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ani_SJS100_1|g4589.t1
MATNTHTTLTKTITTYFTSIDASDLSTTISLLAPTATFTIVTAANTTFTGRDAIHSMLADFVARSSSMEHRVLSM
VVDEKTGKVATQQRYIGKLKDGTENDMHNCNFFDVDEEGRIEKVVVWMGGGSPLK*
Coding >Ani_SJS100_1|g4589.t1
ATGGCCACGAATACACACACCACCTTAACGAAAACAATTACAACCTACTTCACCTCCATCGACGCGTCCGATCTC
TCCACAACCATCTCGCTCCTCGCCCCCACCGCTACGTTCACCATAGTCACAGCAGCCAACACGACCTTCACGGGC
CGGGACGCTATCCACTCCATGCTGGCTGATTTTGTCGCCCGGTCTAGCTCCATGGAACATCGTGTTCTGAGCATG
GTTGTGGATGAGAAGACGGGCAAAGTTGCCACGCAGCAGCGGTATATTGGGAAGCTTAAGGACGGGACGGAGAAC
GATATGCATAATTGTAATTTCTTTGATGTGGATGAGGAGGGGAGGATTGAGAAGGTGGTGGTTTGGATGGGTGGG
GGGAGTCCGTTGAAGTAG
Transcript >Ani_SJS100_1|g4589.t1
ATGGCCACGAATACACACACCACCTTAACGAAAACAATTACAACCTACTTCACCTCCATCGACGCGTCCGATCTC
TCCACAACCATCTCGCTCCTCGCCCCCACCGCTACGTTCACCATAGTCACAGCAGCCAACACGACCTTCACGGGC
CGGGACGCTATCCACTCCATGCTGGCTGATTTTGTCGCCCGGTCTAGCTCCATGGAACATCGTGTTCTGAGCATG
GTTGTGGATGAGAAGACGGGCAAAGTTGCCACGCAGCAGCGGTATATTGGGAAGCTTAAGGACGGGACGGAGAAC
GATATGCATAATTGTAATTTCTTTGATGTGGATGAGGAGGGGAGGATTGAGAAGGTGGTGGTTTGGATGGGTGGG
GGGAGTCCGTTGAAGTAG
Gene >Ani_SJS100_1|g4589.t1
ATGGCCACGAATACACACACCACCTTAACGAAAACAATTACAACCTACTTCACCTCCATCGACGCGTCCGATCTC
TCCACAACCATCTCGCTCCTCGCCCCCACCGCTACGTTCACCATAGTCACAGCAGCCAACACGACCTTCACGGGC
CGGGACGCTATCCACTCCATGCTGGCTGATTTTGTCGCCCGGTCTAGCTCCATGGAACATCGTGTTCTGAGCATG
GTTGTGGATGAGAAGACGGGCAAAGTTGCCACGCAGCAGCGGTATATTGGGAAGCTTAAGGACGGGACGGAGAAC
GATATGCATAATTGTAATTTCTTTGATGTGGATGAGGAGGGGAGGATTGAGAAGGTGGTGGTTTGGATGGGTGGG
GGGAGTCCGTTGAAGTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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