Fungal Genomics

at Utrecht University

General Properties

Protein IDAni_SJS100_1|g4559.t1
Gene name
Locationscaffold_023:219994..221316
Strand-
Gene length (bp)1322
Transcript length (bp)1026
Coding sequence length (bp)1026
Protein length (aa) 342

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PFAM Domains

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 20 0.5

Transmembrane Domains

Domain # Start End Length
1 27 49 22
2 62 84 22
3 138 160 22
4 173 195 22
5 205 227 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ani_SJS100_1|g4559.t1
MAVLASSLPPGVSPPLTEDNDHNHNGLIVIVTSLALFLVLASLVIRIFASSKRGLMLQDDHVLFAAAICACTQVS
LVLLQVHYGWGKSRELIPFSDYTQMKKAGYAADLFYVLIIAIRCNSRPWTDIDSACGGLFPRWQAICALDIVLEA
VILAYPAITIRNVQITLSKKLKVLSILNCRVILIPLSAVHLYYIHLQIYSSNPTLVGTYATIVAELHLSLSIVLL
TVSCLKMFVAVYEDDHGLAYTEDASNSHSRSGRSGCSGPKSWRSSRPVKDLSSFGSSCNEEEPILRTEATVSASS
PPLEGHRRNAIMKSVQISVTRESIELGEMAGPSSAAIPRST*
Coding >Ani_SJS100_1|g4559.t1
ATGGCCGTCCTGGCCTCCTCGCTTCCTCCTGGAGTTTCCCCTCCCTTGACGGAGGATAACGACCATAATCATAAC
GGTCTGATCGTTATCGTTACTTCCCTGGCTCTATTCTTGGTTCTCGCCTCGCTGGTCATCAGAATATTCGCCTCA
TCAAAAAGAGGTCTCATGCTCCAGGATGACCACGTTCTCTTTGCCGCAGCAATATGTGCTTGCACCCAGGTATCG
CTTGTGCTTCTCCAGGTTCACTATGGGTGGGGCAAGTCCAGAGAGCTGATCCCGTTCAGTGACTACACACAGATG
AAGAAGGCCGGATACGCGGCGGATCTGTTTTATGTCCTTATCATTGCCATTCGATGCAACAGCCGTCCTTGGACT
GATATCGATTCCGCATGTGGTGGGCTTTTCCCACGATGGCAAGCCATTTGTGCCCTTGACATTGTTTTGGAAGCC
GTGATCCTTGCATATCCAGCGATAACGATCCGAAATGTACAAATAACCTTGAGCAAGAAGCTAAAGGTTCTATCC
ATTCTGAACTGCCGGGTCATATTGATTCCCCTTTCCGCTGTGCACCTATACTACATTCACCTTCAGATATATTCC
TCCAACCCCACGCTTGTCGGCACCTATGCCACCATTGTCGCAGAGCTACACCTCAGCCTCAGCATCGTTCTTCTC
ACAGTCTCATGCCTAAAAATGTTCGTCGCGGTTTACGAGGATGATCATGGGCTCGCATACACGGAAGATGCTTCG
AATTCTCACAGTCGCAGCGGGCGCAGCGGGTGCAGCGGGCCCAAATCATGGCGATCATCTCGCCCGGTCAAAGAC
CTGAGCTCGTTTGGTAGCAGTTGTAATGAAGAGGAGCCGATCTTACGGACGGAAGCGACCGTGTCGGCCTCCTCA
CCACCGCTTGAAGGGCATCGCCGCAATGCGATAATGAAAAGTGTACAGATATCAGTAACCCGAGAGAGCATTGAA
CTGGGCGAGATGGCGGGACCATCTTCTGCTGCGATACCTAGGTCAACATGA
Transcript >Ani_SJS100_1|g4559.t1
ATGGCCGTCCTGGCCTCCTCGCTTCCTCCTGGAGTTTCCCCTCCCTTGACGGAGGATAACGACCATAATCATAAC
GGTCTGATCGTTATCGTTACTTCCCTGGCTCTATTCTTGGTTCTCGCCTCGCTGGTCATCAGAATATTCGCCTCA
TCAAAAAGAGGTCTCATGCTCCAGGATGACCACGTTCTCTTTGCCGCAGCAATATGTGCTTGCACCCAGGTATCG
CTTGTGCTTCTCCAGGTTCACTATGGGTGGGGCAAGTCCAGAGAGCTGATCCCGTTCAGTGACTACACACAGATG
AAGAAGGCCGGATACGCGGCGGATCTGTTTTATGTCCTTATCATTGCCATTCGATGCAACAGCCGTCCTTGGACT
GATATCGATTCCGCATGTGGTGGGCTTTTCCCACGATGGCAAGCCATTTGTGCCCTTGACATTGTTTTGGAAGCC
GTGATCCTTGCATATCCAGCGATAACGATCCGAAATGTACAAATAACCTTGAGCAAGAAGCTAAAGGTTCTATCC
ATTCTGAACTGCCGGGTCATATTGATTCCCCTTTCCGCTGTGCACCTATACTACATTCACCTTCAGATATATTCC
TCCAACCCCACGCTTGTCGGCACCTATGCCACCATTGTCGCAGAGCTACACCTCAGCCTCAGCATCGTTCTTCTC
ACAGTCTCATGCCTAAAAATGTTCGTCGCGGTTTACGAGGATGATCATGGGCTCGCATACACGGAAGATGCTTCG
AATTCTCACAGTCGCAGCGGGCGCAGCGGGTGCAGCGGGCCCAAATCATGGCGATCATCTCGCCCGGTCAAAGAC
CTGAGCTCGTTTGGTAGCAGTTGTAATGAAGAGGAGCCGATCTTACGGACGGAAGCGACCGTGTCGGCCTCCTCA
CCACCGCTTGAAGGGCATCGCCGCAATGCGATAATGAAAAGTGTACAGATATCAGTAACCCGAGAGAGCATTGAA
CTGGGCGAGATGGCGGGACCATCTTCTGCTGCGATACCTAGGTCAACATGA
Gene >Ani_SJS100_1|g4559.t1
ATGGCCGTCCTGGCCTCCTCGCTTCCTCCTGGAGTTTCCCCTCCCTTGACGGAGGATAACGACCATAATCATAAC
GGTCTGATCGTTATCGTTACTTCCCTGGCTCTATTCTTGGTTCTCGCCTCGCTGGTCATCAGAATATTCGCCTCA
TCAAAAAGAGGTCTCATGCTCCAGGATGACCACGTTCTCTTTGCCGCAGCAGTGGGTTAGCTTCCACTAAGAATG
TCCGTTTACAAACTAATCTCCTGGGTCCACCAGATATGTGCTTGCACCCAGGTATCGCTTGTGCTTCTCCAGGTT
CACTATGGGTGGGGCAAGTCCAGAGAGCTGATCCCGTTCAGTGACTACACACAGATGAAGAAGGTAAGTACGTTG
TCCGAGCGCAGAGACCGACCAACGAGCTAAACGCCTTAGGCCGGATACGCGGCGGATCTGTTTTATGTCCTTATC
ATTGGTTTGTCAAAAATAGGCACGATGCTTTTCTATCAGAATCTATCCTTGCAGCGTACAAAGTGGATGATCAAT
GCTATCATATCATCCTGTGGCTTATGGACCATACTCGCAATATTGCTCCTAGCCATTCGATGCAACAGCCGTCCT
TGGACTGATATCGATTCCGCATGTGGTGGGCTTTTCCCACGATGGCAAGCCATTTGTGCCCTTGACATTGTTTTG
GAAGCCGTGATCCTTGCATATCCAGCGATAACGATCCGAAATGTACAAATAACCTTGAGCAAGAAGCTAAAGGTT
CTATCCATTCTGAACTGCCGGGTCATGTACGTCGCCTGTCTTTACATACGTGCTGAGTTTTCGCATGCTGACACG
AATATCTCCATCCCAGATTGATTCCCCTTTCCGCTGTGCACCTATACTACATTCACCTTCAGATATATTCCTCCA
ACCCCACGCTTGTCGGCACCTATGCCACCATTGTCGCAGAGCTACACCTCAGCCTCAGCATCGTTCTTCTCACAG
TCTCATGCCTAAAAATGTTCGTCGCGGTTTACGAGGATGATCATGGGCTCGCATACACGGAAGATGCTTCGAATT
CTCACAGTCGCAGCGGGCGCAGCGGGTGCAGCGGGCCCAAATCATGGCGATCATCTCGCCCGGTCAAAGACCTGA
GCTCGTTTGGTAGCAGTTGTAATGAAGAGGAGCCGATCTTACGGACGGAAGCGACCGTGTCGGCCTCCTCACCAC
CGCTTGAAGGGCATCGCCGCAATGCGATAATGAAAAGTGTACAGATATCAGTAACCCGAGAGAGCATTGAACTGG
GCGAGATGGCGGGACCATCTTCTGCTGCGATACCTAGGTCAACATGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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