© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ani_SJS100_1|g4548.t1 |
| Gene name | |
| Location | scaffold_023:182812..184854 |
| Strand | + |
| Gene length (bp) | 2042 |
| Transcript length (bp) | 1608 |
| Coding sequence length (bp) | 1608 |
| Protein length (aa) | 536 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF00324 | AA_permease | Amino acid permease | 6.0E-39 | 56 | 325 |
| PF00324 | AA_permease | Amino acid permease | 1.4E-18 | 327 | 491 |
| PF13520 | AA_permease_2 | Amino acid permease | 2.4E-08 | 57 | 476 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0055085 | transmembrane transport | Yes |
| GO:0016020 | membrane | Yes |
| GO:0022857 | transmembrane transporter activity | Yes |
| GO:0110165 | cellular anatomical entity | No |
| GO:0008150 | biological_process | No |
| GO:0005575 | cellular_component | No |
| GO:0051234 | establishment of localization | No |
| GO:0051179 | localization | No |
| GO:0009987 | cellular process | No |
| GO:0005215 | transporter activity | No |
| GO:0006810 | transport | No |
| GO:0003674 | molecular_function | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 44 | 0.45 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 54 | 73 | 19 |
| 2 | 85 | 107 | 22 |
| 3 | 136 | 158 | 22 |
| 4 | 165 | 183 | 18 |
| 5 | 198 | 220 | 22 |
| 6 | 277 | 299 | 22 |
| 7 | 359 | 381 | 22 |
| 8 | 383 | 405 | 22 |
| 9 | 434 | 456 | 22 |
| 10 | 463 | 485 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS100_1|g4548.t1 MDSQLKDTNGPGSSSKVCNEKPVDLTPTRSVDEGQIDSDVEGFGTLHRTLTPRLIHIISLGSNVGSGLFIATGKA LAEGGPGNMFIGYLIVCIGVWANLQTLAEMTIAFPTSGNYIDYADRWVDPALAFGAGLAEWLGWTSVFASEATFF VLLVGFWSSGAIPEAALLTIFLVFCLAVFLVPNKYFGWLEYFGSLVKVLLFFFITIISLAIIGGAGPSGYVRDGS TWTDLPAFKNGFGGFANAALLAIWGTGDQVFIGVMGGEAESPRYSMAHAATLVPWRVAVFYLVSVVLVSIIVPSD DSRLLGGSSVTTSPFVIAVEDAGIRECIFLPSRILRTMALQNLLSSFIAKVDEKGRPRWALAITSVAAVILTYMS LSAGGLEVLNWLIAITSASFFINWAIIAFTSFRFRAAIKAQNSTLLTSPAYAWHSPLWPLGPVTALIISTLLLVC ILYLGIKPIDESFSAYNFFSYTIGLILIITATVMYKIVFRTEWRNPATADLDTGRAVLTAEEIRRLDMYYEMPRW RRVGGYFRVW* |
| Coding | >Ani_SJS100_1|g4548.t1 ATGGACTCTCAATTGAAAGATACCAATGGACCAGGAAGCTCATCGAAAGTGTGCAATGAGAAACCAGTAGATCTC ACGCCCACACGCTCAGTGGATGAAGGTCAGATAGACTCCGACGTGGAAGGATTTGGGACATTGCATCGAACATTA ACCCCACGGCTGATCCACATAATATCCCTGGGTTCCAATGTCGGAAGTGGCTTATTCATAGCGACGGGGAAGGCC CTGGCCGAGGGAGGCCCAGGAAACATGTTCATAGGTTATTTAATCGTCTGCATCGGAGTCTGGGCCAACCTGCAA ACATTGGCTGAGATGACAATTGCTTTTCCCACGTCAGGCAATTACATCGACTACGCCGATCGATGGGTTGACCCA GCATTGGCGTTTGGTGCTGGCCTTGCGGAATGGCTAGGATGGACGTCTGTGTTTGCGTCGGAAGCGACCTTTTTC GTGCTTTTAGTGGGCTTCTGGTCCTCCGGAGCCATTCCTGAAGCAGCTTTGCTCACGATATTTCTGGTCTTCTGT TTGGCGGTGTTCTTGGTGCCTAACAAGTATTTTGGCTGGCTTGAATACTTCGGCTCCTTGGTCAAGGTGCTACTA TTCTTCTTCATCACCATAATCTCACTGGCGATAATCGGTGGTGCCGGTCCATCAGGGTATGTGCGAGACGGAAGC ACATGGACGGACCTACCGGCCTTTAAGAACGGTTTCGGAGGCTTTGCCAACGCCGCACTACTTGCTATCTGGGGC ACCGGTGACCAGGTCTTCATCGGAGTCATGGGCGGTGAAGCCGAATCTCCTCGCTACTCCATGGCACATGCAGCC ACTCTAGTTCCATGGCGAGTGGCAGTCTTCTATCTGGTTTCTGTGGTTCTTGTCTCGATCATTGTTCCCTCAGAC GATTCACGCCTCCTAGGCGGTTCCAGTGTGACTACATCCCCCTTTGTGATTGCCGTCGAAGATGCAGGAATCAGA GAATGCATATTCCTCCCATCCCGCATTCTCCGCACTATGGCCCTCCAGAACCTACTATCCTCGTTCATTGCCAAG GTCGACGAAAAGGGTCGTCCAAGATGGGCACTTGCCATTACTTCCGTTGCGGCAGTCATACTTACCTACATGAGC TTGAGCGCCGGTGGTCTCGAAGTCCTCAACTGGCTCATCGCCATAACCAGCGCCTCCTTCTTCATTAACTGGGCC ATCATCGCCTTCACCTCGTTCCGCTTCCGCGCTGCCATCAAAGCACAGAACAGCACCCTCCTAACAAGTCCAGCT TACGCATGGCACTCCCCCCTATGGCCACTAGGCCCGGTCACTGCCCTTATCATCTCAACATTACTTCTCGTCTGT ATTCTCTATCTGGGAATCAAGCCAATCGACGAATCCTTCTCAGCATATAACTTCTTCTCGTATACCATCGGACTC ATTCTGATCATTACTGCCACGGTCATGTACAAGATTGTCTTTCGAACTGAGTGGCGCAATCCAGCCACTGCCGAT TTGGATACTGGAAGGGCGGTGTTGACTGCAGAGGAGATTCGGCGGTTGGATATGTATTATGAGATGCCGCGGTGG AGGCGCGTGGGTGGGTATTTTAGGGTGTGGTGA |
| Transcript | >Ani_SJS100_1|g4548.t1 ATGGACTCTCAATTGAAAGATACCAATGGACCAGGAAGCTCATCGAAAGTGTGCAATGAGAAACCAGTAGATCTC ACGCCCACACGCTCAGTGGATGAAGGTCAGATAGACTCCGACGTGGAAGGATTTGGGACATTGCATCGAACATTA ACCCCACGGCTGATCCACATAATATCCCTGGGTTCCAATGTCGGAAGTGGCTTATTCATAGCGACGGGGAAGGCC CTGGCCGAGGGAGGCCCAGGAAACATGTTCATAGGTTATTTAATCGTCTGCATCGGAGTCTGGGCCAACCTGCAA ACATTGGCTGAGATGACAATTGCTTTTCCCACGTCAGGCAATTACATCGACTACGCCGATCGATGGGTTGACCCA GCATTGGCGTTTGGTGCTGGCCTTGCGGAATGGCTAGGATGGACGTCTGTGTTTGCGTCGGAAGCGACCTTTTTC GTGCTTTTAGTGGGCTTCTGGTCCTCCGGAGCCATTCCTGAAGCAGCTTTGCTCACGATATTTCTGGTCTTCTGT TTGGCGGTGTTCTTGGTGCCTAACAAGTATTTTGGCTGGCTTGAATACTTCGGCTCCTTGGTCAAGGTGCTACTA TTCTTCTTCATCACCATAATCTCACTGGCGATAATCGGTGGTGCCGGTCCATCAGGGTATGTGCGAGACGGAAGC ACATGGACGGACCTACCGGCCTTTAAGAACGGTTTCGGAGGCTTTGCCAACGCCGCACTACTTGCTATCTGGGGC ACCGGTGACCAGGTCTTCATCGGAGTCATGGGCGGTGAAGCCGAATCTCCTCGCTACTCCATGGCACATGCAGCC ACTCTAGTTCCATGGCGAGTGGCAGTCTTCTATCTGGTTTCTGTGGTTCTTGTCTCGATCATTGTTCCCTCAGAC GATTCACGCCTCCTAGGCGGTTCCAGTGTGACTACATCCCCCTTTGTGATTGCCGTCGAAGATGCAGGAATCAGA GAATGCATATTCCTCCCATCCCGCATTCTCCGCACTATGGCCCTCCAGAACCTACTATCCTCGTTCATTGCCAAG GTCGACGAAAAGGGTCGTCCAAGATGGGCACTTGCCATTACTTCCGTTGCGGCAGTCATACTTACCTACATGAGC TTGAGCGCCGGTGGTCTCGAAGTCCTCAACTGGCTCATCGCCATAACCAGCGCCTCCTTCTTCATTAACTGGGCC ATCATCGCCTTCACCTCGTTCCGCTTCCGCGCTGCCATCAAAGCACAGAACAGCACCCTCCTAACAAGTCCAGCT TACGCATGGCACTCCCCCCTATGGCCACTAGGCCCGGTCACTGCCCTTATCATCTCAACATTACTTCTCGTCTGT ATTCTCTATCTGGGAATCAAGCCAATCGACGAATCCTTCTCAGCATATAACTTCTTCTCGTATACCATCGGACTC ATTCTGATCATTACTGCCACGGTCATGTACAAGATTGTCTTTCGAACTGAGTGGCGCAATCCAGCCACTGCCGAT TTGGATACTGGAAGGGCGGTGTTGACTGCAGAGGAGATTCGGCGGTTGGATATGTATTATGAGATGCCGCGGTGG AGGCGCGTGGGTGGGTATTTTAGGGTGTGGTGA |
| Gene | >Ani_SJS100_1|g4548.t1 ATGGACTCTCAATTGAAAGATACCAATGGACCAGGAAGCTCATCGAAAGTGTGCAATGAGAAACCAGTAGATCTC ACGCCCACACGCTCAGTGGATGAAGGTCAGATAGACTCCGACGTGGAAGGATTTGGGACATTGCATCGAACATTA ACCCCACGGCTGATCCACGTACGCTCCCATGTCTGCATGCCCCTCGCCACAGACACATGCTTATTGAAACAGATA ATATCCCTGGGTTCCAATGTCGGAAGTGGCTTATTCATAGCGACGGGGAAGGCCCTGGCCGAGGGAGGCCCAGGA AACATGTTCATAGGTTATTTAATCGTCTGCATCGGAGTCTGGGCCAACCTGCAAACATTGGCTGAGATGACAATT GCTTTTCCCACGTCAGGCAATTACATCGACTACGCCGATCGATGGGTTGACCCAGCATTGGCGTTTGGTGCTGGC CTTGCGGAATGGCTAGGTGAGTAGACAGGCACTAGGGTTTTCGGAACGCTCTTCTGAACTCGCCCTATTTCCAGG ATGGACGTCTGTGTTTGCGTCGGAAGCGACCTTTTTCGTGCTTTTAGTGGGCTTCTGGTCCTCCGGAGCCATTCC TGAAGCAGCTTTGCGTGAGTCTGCTTCCAGATTACTCGCACGGCACCTGCTTACAACTGAGGTAGTCACGATATT TCTGGTCTTCTGTTTGGCGGTGTTCTTGGTGCCTAACAAGTATTTTGGCTGGCTTGAATACTTCGGCTCCTTGGT CAAGGTGCTACTATTCTTCTTCATCACCATAATCTCACTGGCGATAATCGGTGGTGCCGGTCCATCAGGGTATGT GCGAGACGGAAGCACATGGACGGACCTACCGGCCTTTAAGAACGGTTTCGGAGTGAGTACATCCGTTTTGACCCC CTCTTCCACTCTTAACTCAGCAATTCAATGTAGGGCTTTGCCAACGCCGCACTACTTGCTATCTGGGGCACCGGT GACCAGGTCTTCATCGGAGTCATGGGCGGTGAAGCCGAATCTCCTCGCTACTCCATGGCACATGCAGCCACTCTA GTTCCATGGCGAGTGGCAGTCTTCTATCTGGTTTCTGTGGTTCTTGTCTCGATCATTGTTCCCTCAGACGATTCA CGCCTCCTAGGCGGTTCCAGTGTGACTACATCCCCCTTTGTGATTGCCGTCGAAGATGCAGGAATCAGAGGTATT CCCAGTTTAATTAATGCATGCTTAATTATCGGGGTCTTGGCCATCGCTTTAGAATGCATATTCCTCCCATCCCGC ATTCTCCGCACTATGGCCCTCCAGAACCTACTATCCTCGTTCATTGCCAAGGTCGACGAAAAGGGTCGTCCAAGA TGGGCACTTGCCATTACTTCCGTTGCGGCAGTCATACTTACCTACATGAGCTTGAGCGGTTAGCCCCCCTTCCTC CAAGTGCCTGTTATACCTCATCAATAAGTCCCCCCTCCCTTAGCATTACTAACGAATTGAAAATAGCCGGTGGTC TCGAAGTCCTCAACTGGCTCATCGCCATAACCAGCGCCTCCTTCTTCATTAACTGGGCCATCATCGCCTTCACCT CGTTCCGCTTCCGCGCTGCCATCAAAGCACAGAACAGCACCCTCCTAACAAGTCCAGCTTACGCATGGCACTCCC CCCTATGGCCACTAGGCCCGGTCACTGCCCTTATCATCTCAACATTACTTCTCGTCTGTATTCTCTATCTGGGAA TCAAGCCAGTAAGATGCCCCCTATCTACCACACACCTTCACCATAACCCCATTTTTTTTAATGAATTAACTAATC GACGATAGATCGACGAATCCTTCTCAGCATATAACTTCTTCTCGTATACCATCGGACTCATTCTGATCATTACTG CCACGGTCATGTACAAGATTGTCTTTCGAACTGAGTGGCGCAATCCAGCCACTGCCGATTTGGATACTGGAAGGG CGGTGTTGACTGCAGAGGAGATTCGGCGGTTGGATATGTATTATGAGATGCCGCGGTGGAGGCGCGTGGGTGGGT ATTTTAGGGTGTGGTGA |