Fungal Genomics

at Utrecht University

General Properties

Protein ID	Ani_SJS100_1\|g4537.t1
Gene name
Location	scaffold_023:153430..154116
Strand	-
Gene length (bp)	686
Transcript length (bp)	633
Coding sequence length (bp)	633
Protein length (aa)	211

PFAM Domains

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 21	0.5

Transmembrane Domains

Domain #	Start	End	Length
1	7	26	19
2	36	58	22
3	79	101	22
4	105	124	19
5	137	159	22
6	169	191	22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Ani_SJS100_1\|g4537.t1 MACVAAYASFSYSLIYLCLQVYPIVFEEERGYSPVIASLPFLGILVGTACAVGITFAYRTQYAKAVMENDGKAVP EARLPPLVLGGIVLPAGFFWLGWTAAPKYSWVLPTVAGVFVGAGNNIIFQQCINYLIDTYGPYAASAISATTILR SLLAAGLPLAAKPMFHNLGVGPAASLMGGIACLALPIPFVFMKYGRTLREKSKIAPTSSD*
Coding	>Ani_SJS100_1\|g4537.t1 ATGGCCTGCGTTGCGGCATATGCATCTTTCTCATATAGTTTGATTTATCTATGTCTCCAGGTGTACCCCATTGTG TTTGAAGAGGAACGTGGATACAGTCCAGTGATTGCTTCCTTGCCATTTCTCGGGATCCTGGTCGGCACAGCTTGC GCTGTCGGAATCACCTTTGCGTATCGAACACAGTATGCAAAAGCGGTTATGGAAAACGATGGAAAAGCCGTTCCT GAAGCGCGACTTCCCCCGCTGGTACTTGGGGGAATTGTCCTGCCAGCAGGATTCTTTTGGCTTGGATGGACTGCA GCACCAAAGTACTCGTGGGTACTGCCCACAGTTGCAGGAGTATTCGTCGGTGCCGGAAACAACATCATCTTCCAG CAATGTATCAACTATTTAATCGACACCTACGGGCCATATGCAGCGAGCGCGATCTCAGCAACCACCATACTGAGA TCCTTGTTGGCGGCGGGGCTGCCGTTGGCGGCGAAGCCCATGTTCCACAATCTCGGCGTGGGACCTGCTGCTAGT TTAATGGGAGGCATTGCTTGCCTGGCATTGCCGATACCGTTCGTCTTCATGAAGTATGGACGCACCCTGCGCGAG AAGTCAAAAATCGCACCAACCAGTTCAGACTAG
Transcript	>Ani_SJS100_1\|g4537.t1 ATGGCCTGCGTTGCGGCATATGCATCTTTCTCATATAGTTTGATTTATCTATGTCTCCAGGTGTACCCCATTGTG TTTGAAGAGGAACGTGGATACAGTCCAGTGATTGCTTCCTTGCCATTTCTCGGGATCCTGGTCGGCACAGCTTGC GCTGTCGGAATCACCTTTGCGTATCGAACACAGTATGCAAAAGCGGTTATGGAAAACGATGGAAAAGCCGTTCCT GAAGCGCGACTTCCCCCGCTGGTACTTGGGGGAATTGTCCTGCCAGCAGGATTCTTTTGGCTTGGATGGACTGCA GCACCAAAGTACTCGTGGGTACTGCCCACAGTTGCAGGAGTATTCGTCGGTGCCGGAAACAACATCATCTTCCAG CAATGTATCAACTATTTAATCGACACCTACGGGCCATATGCAGCGAGCGCGATCTCAGCAACCACCATACTGAGA TCCTTGTTGGCGGCGGGGCTGCCGTTGGCGGCGAAGCCCATGTTCCACAATCTCGGCGTGGGACCTGCTGCTAGT TTAATGGGAGGCATTGCTTGCCTGGCATTGCCGATACCGTTCGTCTTCATGAAGTATGGACGCACCCTGCGCGAG AAGTCAAAAATCGCACCAACCAGTTCAGACTAG
Gene	>Ani_SJS100_1\|g4537.t1 ATGGCCTGCGTTGCGGCATATGCATCTTTCTCATATAGTTTGATTTATCTATGTCTCCAGGTGTACCCCATTGTG TTTGAAGAGGAACGTGGATACAGTCCAGTGATTGCTTCCTTGCCATTTCTCGGGATCCTGGTCGGCACAGCTTGC GCTGTCGGAATCACCTTTGCGTATCGAACACAGTATGCAAAAGCGGTTATGGAAAACGATGGAAAAGCCGTTCCT GAAGCGCGACTTCCCCCGCTGGTACTTGGGGGAATTGTCCTGCCAGCAGGATTCTTTTGGCTTGGATGGACTGCA GCACCAAAGTACTCGTGGGTACTGCCCACAGTTGCAGGAGGTATGCCATAAAATCTTCCGACGATGTAAGACTAT ATTGTAACATCTATGCAGTATTCGTCGGTGCCGGAAACAACATCATCTTCCAGCAATGTATCAACTATTTAATCG ACACCTACGGGCCATATGCAGCGAGCGCGATCTCAGCAACCACCATACTGAGATCCTTGTTGGCGGCGGGGCTGC CGTTGGCGGCGAAGCCCATGTTCCACAATCTCGGCGTGGGACCTGCTGCTAGTTTAATGGGAGGCATTGCTTGCC TGGCATTGCCGATACCGTTCGTCTTCATGAAGTATGGACGCACCCTGCGCGAGAAGTCAAAAATCGCACCAACCA GTTCAGACTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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