Protein ID | Ani_SJS100_1|g4521.t1 |
Gene name | |
Location | scaffold_023:109029..110234 |
Strand | + |
Gene length (bp) | 1205 |
Transcript length (bp) | 1152 |
Coding sequence length (bp) | 1152 |
Protein length (aa) | 384 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 25 | 0.5 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 5 | 22 | 17 |
2 | 77 | 99 | 22 |
3 | 114 | 136 | 22 |
4 | 157 | 179 | 22 |
5 | 194 | 216 | 22 |
6 | 236 | 258 | 22 |
7 | 303 | 322 | 19 |
8 | 343 | 365 | 22 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ani_SJS100_1|g4521.t1 MSVKLILPALSLFTLYAIWYYADANGLLELARESIERKTLPGSDAPLRTVYTGFPQLDHLLTTLTTFFWPTTDGS HPALTLHTLGFAGTFGSAWILITLESWRQGNAWTLAAFPLVFGLSAQTLTFAFAAPLYCALQLTTSITSTSPTAT NIYIPKTILTTLPLIFTLSYILPSALMVLPLSSTITTDLKQLFIALWQPFPAYISILLTLSHTLFSPFTSTPKPT QKNHNLSSLRFIYAFTFFHSLISHLVTLTVSLSTLLAPSILSPEYRTSLHPSIVFGIPTPWTSPVIQVASIADGV HAFLRWDYLIGSAGMVVWAWRLYGNAVKMDKGGAMGWCEWVSLVVRVGLLGVVAGPVGAAVVLVWGRDEMVFGRG EKGGEKRS* |
Coding | >Ani_SJS100_1|g4521.t1 ATGTCTGTCAAATTGATCCTTCCCGCCCTCAGCCTCTTCACCCTCTATGCCATCTGGTACTACGCCGACGCCAAT GGCCTCCTCGAACTAGCCAGAGAGAGCATCGAGCGCAAAACACTCCCAGGCAGCGATGCACCTCTGCGAACCGTC TACACTGGCTTCCCTCAACTGGACCACTTGCTCACCACCCTAACCACCTTTTTCTGGCCCACCACCGATGGAAGC CACCCTGCCTTGACCCTCCACACCCTCGGATTCGCAGGAACATTTGGCTCCGCTTGGATCCTGATAACCCTAGAG TCATGGCGGCAAGGCAATGCCTGGACACTAGCAGCATTTCCCCTAGTATTCGGTCTCTCCGCCCAAACCCTAACG TTCGCCTTCGCAGCACCTCTCTACTGCGCCCTACAACTCACCACCTCCATAACCTCCACCTCCCCCACAGCAACT AACATCTACATCCCCAAAACTATCCTCACTACTCTCCCCCTGATCTTCACCCTCTCCTACATCCTCCCAAGCGCC CTGATGGTCCTGCCCCTCTCCTCAACCATAACAACCGACCTAAAGCAACTCTTCATCGCCCTCTGGCAACCATTC CCAGCATACATCTCCATCCTCCTCACCCTTTCCCACACCCTCTTCTCCCCATTCACATCTACCCCTAAACCAACC CAAAAGAACCACAACCTCTCCTCCCTACGCTTTATCTACGCCTTCACCTTCTTCCACTCCCTCATCTCCCATCTC GTCACCCTTACTGTCTCACTATCTACCCTCCTTGCACCTTCTATCCTCTCCCCGGAATACCGTACCTCCCTGCAT CCCAGTATTGTGTTTGGGATCCCCACGCCGTGGACATCGCCTGTTATACAGGTGGCTAGTATTGCGGACGGGGTG CATGCGTTCCTGAGATGGGATTACTTGATTGGGTCGGCAGGGATGGTGGTTTGGGCGTGGAGGCTATACGGGAAT GCGGTGAAGATGGACAAAGGTGGTGCAATGGGGTGGTGTGAATGGGTGTCGTTAGTGGTGAGAGTGGGGTTGTTG GGGGTTGTTGCTGGGCCCGTAGGGGCGGCGGTGGTACTGGTTTGGGGGAGGGATGAGATGGTTTTCGGGAGGGGG GAGAAGGGGGGTGAGAAAAGGAGTTAA |
Transcript | >Ani_SJS100_1|g4521.t1 ATGTCTGTCAAATTGATCCTTCCCGCCCTCAGCCTCTTCACCCTCTATGCCATCTGGTACTACGCCGACGCCAAT GGCCTCCTCGAACTAGCCAGAGAGAGCATCGAGCGCAAAACACTCCCAGGCAGCGATGCACCTCTGCGAACCGTC TACACTGGCTTCCCTCAACTGGACCACTTGCTCACCACCCTAACCACCTTTTTCTGGCCCACCACCGATGGAAGC CACCCTGCCTTGACCCTCCACACCCTCGGATTCGCAGGAACATTTGGCTCCGCTTGGATCCTGATAACCCTAGAG TCATGGCGGCAAGGCAATGCCTGGACACTAGCAGCATTTCCCCTAGTATTCGGTCTCTCCGCCCAAACCCTAACG TTCGCCTTCGCAGCACCTCTCTACTGCGCCCTACAACTCACCACCTCCATAACCTCCACCTCCCCCACAGCAACT AACATCTACATCCCCAAAACTATCCTCACTACTCTCCCCCTGATCTTCACCCTCTCCTACATCCTCCCAAGCGCC CTGATGGTCCTGCCCCTCTCCTCAACCATAACAACCGACCTAAAGCAACTCTTCATCGCCCTCTGGCAACCATTC CCAGCATACATCTCCATCCTCCTCACCCTTTCCCACACCCTCTTCTCCCCATTCACATCTACCCCTAAACCAACC CAAAAGAACCACAACCTCTCCTCCCTACGCTTTATCTACGCCTTCACCTTCTTCCACTCCCTCATCTCCCATCTC GTCACCCTTACTGTCTCACTATCTACCCTCCTTGCACCTTCTATCCTCTCCCCGGAATACCGTACCTCCCTGCAT CCCAGTATTGTGTTTGGGATCCCCACGCCGTGGACATCGCCTGTTATACAGGTGGCTAGTATTGCGGACGGGGTG CATGCGTTCCTGAGATGGGATTACTTGATTGGGTCGGCAGGGATGGTGGTTTGGGCGTGGAGGCTATACGGGAAT GCGGTGAAGATGGACAAAGGTGGTGCAATGGGGTGGTGTGAATGGGTGTCGTTAGTGGTGAGAGTGGGGTTGTTG GGGGTTGTTGCTGGGCCCGTAGGGGCGGCGGTGGTACTGGTTTGGGGGAGGGATGAGATGGTTTTCGGGAGGGGG GAGAAGGGGGGTGAGAAAAGGAGTTAA |
Gene | >Ani_SJS100_1|g4521.t1 ATGTCTGTCAAATTGATCCTTCCCGCCCTCAGCCTCTTCACCCTCTATGCCATCTGGTACTACGCCGACGCCAAT GGCCTCCTCGAACTAGCCAGAGAGAGCATCGAGCGCAAAACACTCCCAGGCAGCGATGCACCTCTGCGAACCGTC TACACTGGCTTCCCTCAACTGGACCACTTGCTCACCACCCTAACCACCTTTTTCTGGCCCACCACCGATGGAAGC CACCCTGCCTTGACCCTCCACACCCTCGGATTCGCAGGAACATTTGGCTCCGCTTGGATCCTGATAACCCTAGAG TCATGGCGGCAAGGCAATGCCTGGACACTAGCAGCATTGTATGTCCACCTCCATCTACCTATATGTACCGAGCTA ACTTCCTCACCACCAGTCCCCTAGTATTCGGTCTCTCCGCCCAAACCCTAACGTTCGCCTTCGCAGCACCTCTCT ACTGCGCCCTACAACTCACCACCTCCATAACCTCCACCTCCCCCACAGCAACTAACATCTACATCCCCAAAACTA TCCTCACTACTCTCCCCCTGATCTTCACCCTCTCCTACATCCTCCCAAGCGCCCTGATGGTCCTGCCCCTCTCCT CAACCATAACAACCGACCTAAAGCAACTCTTCATCGCCCTCTGGCAACCATTCCCAGCATACATCTCCATCCTCC TCACCCTTTCCCACACCCTCTTCTCCCCATTCACATCTACCCCTAAACCAACCCAAAAGAACCACAACCTCTCCT CCCTACGCTTTATCTACGCCTTCACCTTCTTCCACTCCCTCATCTCCCATCTCGTCACCCTTACTGTCTCACTAT CTACCCTCCTTGCACCTTCTATCCTCTCCCCGGAATACCGTACCTCCCTGCATCCCAGTATTGTGTTTGGGATCC CCACGCCGTGGACATCGCCTGTTATACAGGTGGCTAGTATTGCGGACGGGGTGCATGCGTTCCTGAGATGGGATT ACTTGATTGGGTCGGCAGGGATGGTGGTTTGGGCGTGGAGGCTATACGGGAATGCGGTGAAGATGGACAAAGGTG GTGCAATGGGGTGGTGTGAATGGGTGTCGTTAGTGGTGAGAGTGGGGTTGTTGGGGGTTGTTGCTGGGCCCGTAG GGGCGGCGGTGGTACTGGTTTGGGGGAGGGATGAGATGGTTTTCGGGAGGGGGGAGAAGGGGGGTGAGAAAAGGA GTTAA |