© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ani_SJS100_1|g4520.t1 |
| Gene name | |
| Location | scaffold_023:106334..108183 |
| Strand | - |
| Gene length (bp) | 1849 |
| Transcript length (bp) | 1680 |
| Coding sequence length (bp) | 1680 |
| Protein length (aa) | 560 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF07690 | MFS_1 | Major Facilitator Superfamily | 1.8E-36 | 117 | 500 |
| PF00083 | Sugar_tr | Sugar (and other) transporter | 1.3E-08 | 137 | 289 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0055085 | transmembrane transport | Yes |
| GO:0016021 | integral component of membrane | Yes |
| GO:0022857 | transmembrane transporter activity | Yes |
| GO:0110165 | cellular anatomical entity | No |
| GO:0008150 | biological_process | No |
| GO:0005575 | cellular_component | No |
| GO:0031224 | intrinsic component of membrane | No |
| GO:0051234 | establishment of localization | No |
| GO:0051179 | localization | No |
| GO:0009987 | cellular process | No |
| GO:0005215 | transporter activity | No |
| GO:0006810 | transport | No |
| GO:0003674 | molecular_function | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 21 | 0.45 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 109 | 131 | 22 |
| 2 | 146 | 168 | 22 |
| 3 | 175 | 192 | 17 |
| 4 | 202 | 224 | 22 |
| 5 | 237 | 259 | 22 |
| 6 | 264 | 286 | 22 |
| 7 | 341 | 363 | 22 |
| 8 | 378 | 400 | 22 |
| 9 | 421 | 443 | 22 |
| 10 | 453 | 475 | 22 |
| 11 | 482 | 504 | 22 |
| 12 | 519 | 541 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS100_1|g4520.t1 MPSPSPSSTSSLSNIPTAHASFEPVRTSETRTLSRPQTNIEVSRIETLRLTHESTVGSKAPQTPRDEWLPMGGGK EFPPSLPDPDRYVVEFTGEGDPMHPHNWPIGTKILLSGILAYVTFTASFASAIFSSTVGAISLHYGISTEVATLG VTLYVLGFAAGPTFWAPASELSGRRWPITAGVFGYSIFTVATATAKDVQTIMLTRFFAGLFAASPLSIVPAAFSD IYNNRTRGIAIAMFAMAVFVGPFASPFTGGFIVMSYLGWRWTMYIAAIMGFLGSALLLLFYKETYAPALLMAKAA TVRRQTRNWGIHAKQDEVEVDFRELITVNFSRPFRMLLTEPIVFLVTLYMSFIYGLMYALLAAYPVVFQDIHGMN LGVGSLPFIGLIIGEILGGVFVLSSQGSYTKKLRANNDIPIPEWRLPPAIVGGISFTIGLFWYGWTGWTRSIHWM APTASGLFTGFGIYCIFLQCFNYLIDSYLQFAASVFAANTILRSAVGACFPLFARQMFVNLGVQWAGTLLGCLAA IMIPIPVGFIMFGPALRRRSKFAPAAAVFQEKSA* |
| Coding | >Ani_SJS100_1|g4520.t1 ATGCCCTCTCCATCCCCCTCCAGCACCTCCTCCCTATCCAACATCCCAACCGCCCACGCGAGCTTCGAGCCCGTC CGCACCTCCGAAACCCGAACCCTAAGCCGGCCGCAAACCAACATCGAGGTCTCGCGCATCGAGACCCTCCGTCTA ACGCACGAATCCACCGTCGGGTCCAAGGCGCCTCAGACTCCCCGGGATGAATGGCTACCTATGGGTGGGGGGAAA GAGTTTCCCCCGTCACTACCGGATCCGGATCGCTATGTAGTCGAGTTTACGGGTGAGGGGGATCCGATGCATCCG CATAATTGGCCGATTGGGACGAAGATCCTCCTATCAGGCATCCTAGCTTACGTGACGTTTACTGCGTCGTTCGCT AGCGCGATATTCTCTTCAACGGTTGGGGCAATCAGTCTTCACTATGGAATCAGCACCGAGGTCGCGACGCTCGGT GTGACGTTGTATGTACTTGGGTTCGCGGCGGGGCCGACGTTCTGGGCGCCTGCGTCGGAGCTGTCTGGGCGGCGG TGGCCCATCACGGCTGGGGTATTTGGGTATAGTATCTTTACTGTGGCGACGGCGACAGCCAAGGATGTGCAGACC ATCATGCTGACGCGGTTCTTTGCTGGGTTGTTCGCGGCGAGTCCGTTGTCGATTGTGCCGGCGGCGTTTTCGGAT ATCTACAATAACCGGACGCGGGGGATTGCGATCGCGATGTTTGCCATGGCGGTGTTTGTGGGGCCATTTGCGTCG CCGTTTACGGGGGGTTTCATCGTGATGAGTTATCTGGGGTGGAGGTGGACGATGTATATTGCGGCGATCATGGGG TTTTTGGGGTCGGCGCTGTTGTTGTTGTTTTACAAGGAGACGTATGCGCCGGCGCTGTTGATGGCTAAGGCGGCG ACGGTGAGGAGACAGACACGAAATTGGGGGATTCATGCTAAGCAGGATGAGGTGGAGGTTGATTTTCGGGAGCTG ATTACGGTGAATTTTAGTCGGCCGTTTCGGATGTTGCTTACGGAGCCGATTGTGTTCCTGGTCACGCTGTACATG TCGTTCATATATGGGCTCATGTATGCTTTGCTGGCGGCGTATCCGGTGGTGTTTCAGGATATTCATGGGATGAAT CTTGGGGTGGGCAGTCTACCGTTTATTGGGCTGATCATTGGGGAGATTCTGGGAGGGGTGTTTGTCTTGTCGAGT CAGGGCTCGTATACCAAGAAGTTGAGGGCGAATAACGACATTCCCATCCCTGAGTGGCGGTTACCCCCGGCCATT GTGGGGGGCATCTCTTTCACCATTGGACTCTTCTGGTATGGCTGGACCGGATGGACGCGGTCGATCCATTGGATG GCCCCGACAGCGTCCGGGCTGTTCACGGGGTTCGGCATCTACTGCATCTTTCTGCAGTGTTTCAACTACCTGATC GATTCGTATCTGCAGTTCGCCGCCTCGGTCTTTGCCGCCAACACCATCCTGCGGTCTGCAGTCGGGGCATGCTTC CCTCTCTTTGCGCGACAGATGTTTGTCAATCTGGGGGTGCAGTGGGCGGGCACATTGCTGGGGTGTCTGGCGGCG ATTATGATCCCGATTCCCGTGGGGTTCATCATGTTTGGACCCGCCTTACGGCGGAGGAGCAAGTTTGCCCCGGCG GCGGCGGTGTTCCAGGAAAAGTCAGCCTAG |
| Transcript | >Ani_SJS100_1|g4520.t1 ATGCCCTCTCCATCCCCCTCCAGCACCTCCTCCCTATCCAACATCCCAACCGCCCACGCGAGCTTCGAGCCCGTC CGCACCTCCGAAACCCGAACCCTAAGCCGGCCGCAAACCAACATCGAGGTCTCGCGCATCGAGACCCTCCGTCTA ACGCACGAATCCACCGTCGGGTCCAAGGCGCCTCAGACTCCCCGGGATGAATGGCTACCTATGGGTGGGGGGAAA GAGTTTCCCCCGTCACTACCGGATCCGGATCGCTATGTAGTCGAGTTTACGGGTGAGGGGGATCCGATGCATCCG CATAATTGGCCGATTGGGACGAAGATCCTCCTATCAGGCATCCTAGCTTACGTGACGTTTACTGCGTCGTTCGCT AGCGCGATATTCTCTTCAACGGTTGGGGCAATCAGTCTTCACTATGGAATCAGCACCGAGGTCGCGACGCTCGGT GTGACGTTGTATGTACTTGGGTTCGCGGCGGGGCCGACGTTCTGGGCGCCTGCGTCGGAGCTGTCTGGGCGGCGG TGGCCCATCACGGCTGGGGTATTTGGGTATAGTATCTTTACTGTGGCGACGGCGACAGCCAAGGATGTGCAGACC ATCATGCTGACGCGGTTCTTTGCTGGGTTGTTCGCGGCGAGTCCGTTGTCGATTGTGCCGGCGGCGTTTTCGGAT ATCTACAATAACCGGACGCGGGGGATTGCGATCGCGATGTTTGCCATGGCGGTGTTTGTGGGGCCATTTGCGTCG CCGTTTACGGGGGGTTTCATCGTGATGAGTTATCTGGGGTGGAGGTGGACGATGTATATTGCGGCGATCATGGGG TTTTTGGGGTCGGCGCTGTTGTTGTTGTTTTACAAGGAGACGTATGCGCCGGCGCTGTTGATGGCTAAGGCGGCG ACGGTGAGGAGACAGACACGAAATTGGGGGATTCATGCTAAGCAGGATGAGGTGGAGGTTGATTTTCGGGAGCTG ATTACGGTGAATTTTAGTCGGCCGTTTCGGATGTTGCTTACGGAGCCGATTGTGTTCCTGGTCACGCTGTACATG TCGTTCATATATGGGCTCATGTATGCTTTGCTGGCGGCGTATCCGGTGGTGTTTCAGGATATTCATGGGATGAAT CTTGGGGTGGGCAGTCTACCGTTTATTGGGCTGATCATTGGGGAGATTCTGGGAGGGGTGTTTGTCTTGTCGAGT CAGGGCTCGTATACCAAGAAGTTGAGGGCGAATAACGACATTCCCATCCCTGAGTGGCGGTTACCCCCGGCCATT GTGGGGGGCATCTCTTTCACCATTGGACTCTTCTGGTATGGCTGGACCGGATGGACGCGGTCGATCCATTGGATG GCCCCGACAGCGTCCGGGCTGTTCACGGGGTTCGGCATCTACTGCATCTTTCTGCAGTGTTTCAACTACCTGATC GATTCGTATCTGCAGTTCGCCGCCTCGGTCTTTGCCGCCAACACCATCCTGCGGTCTGCAGTCGGGGCATGCTTC CCTCTCTTTGCGCGACAGATGTTTGTCAATCTGGGGGTGCAGTGGGCGGGCACATTGCTGGGGTGTCTGGCGGCG ATTATGATCCCGATTCCCGTGGGGTTCATCATGTTTGGACCCGCCTTACGGCGGAGGAGCAAGTTTGCCCCGGCG GCGGCGGTGTTCCAGGAAAAGTCAGCCTAG |
| Gene | >Ani_SJS100_1|g4520.t1 ATGCCCTCTCCATCCCCCTCCAGCACCTCCTCCCTATCCAACATCCCAACCGCCCACGCGAGCTTCGAGCCCGTC CGCACCTCCGAAACCCGAACCCTAAGCCGGCCGCAAACCAACATCGAGGTCTCGCGCATCGAGACCCTCCGTCTA ACGCACGAATCCACCGTCGGGTCCAAGGCGCCTCAGACTCCCCGGGATGAATGGCTACCTATGGGTGGGGGGAAA GAGTTTCCCCCGTCACTACCGGATCCGGATCGCTATGTAGTCGAGTTTACGGGTGAGGGGGATCCGATGCATCCG CATAATTGGCCGATTGGGACGAAGTGTGTATTTTGCTATCTATGTATATATAGAGGGATTTGGTGAATATACGCT GACATGGGAATGGAATAATATAGGATCCTCCTATCAGGCATCCTAGCTTACGTGACGTTTACTGCGTCGTTCGCT AGCGCGATATTCTCTTCAACGGTTGGGGCAATCAGTCTTCACTATGGAATCAGCACCGAGGTCGCGACGCTCGGT GTGACGTTGTATGTACTTGGGTTCGCGGCGGGGCCGACGTTCTGGGCGCCTGCGTCGGAGCTGTCTGGGCGGCGG TGGCCCATCACGGCTGGGGTATTTGGGTATAGTATCTTTACTGTGGCGACGGCGACAGCCAAGGATGTGCAGACC ATCATGCTGACGCGGTTCTTTGCTGGGTTGTTCGCGGCGAGTCCGTTGTCGATTGTGCCGGCGGCGTTTTCGGAT ATCTACAATAACCGGACGCGGGGGATTGCGATCGCGATGTTTGCCATGGCGGTGTTTGTGGGGCCATTTGCGTCG CCGTTTACGGGGGGTTTCATCGTGATGAGTTATCTGGGGTGGAGGTGGACGATGTATATTGCGGCGATCATGGGG TTTTTGGGGTCGGCGCTGTTGTTGTTGTTTTACAAGGAGACGTATGCGCCGGCGCTGTTGATGGCTAAGGCGGCG ACGGTGAGGAGACAGACACGAAATTGGGGGATTCATGCTAAGCAGGATGAGGTGGAGGTTGATTTTCGGGAGCTG ATTACGGTGAATTTTAGTCGGCCGTTTCGGATGTTGCTTACGGAGCCGATTGTGTTCCTGGTCACGCTGTACATG TCGTTCATATATGGGCTCATGTATGCTTTGCTGGCGGCGTATCCGGTGGTGTTTCAGGATATTCATGGGATGAAT CTTGGGGTGGGCAGTCTACCGTTTATTGGGCTGATCATTGGGGAGATTCTGGGAGGGGTGTTTGTCTTGTCGAGT CAGGGCTCGTATACCAAGAAGTTGAGGGCGAATAACGACATTCCCATCCCTGAGTGGCGGTTACCCCCGGCCATT GTGGGGGGCATCTCTTTCACCATTGGACTCTTCTGGTAAGGTGCCTTTCTGCTGGGTGAGTATCTGGCTGATCTG AATAGGTATGGCTGGACCGGATGGACGCGGTCGATCCATTGGATGGCCCCGACAGCGTCCGGGCTGTTCACGGGG TTCGGCATCTACTGCATCTTTCTGCAGTGTTTCAACTACCTGATCGATTCGTATCTGCAGTTGTAAGCTCCTTCT CATGACGCAAATCATTGAAAGCTTCTGACCGAACAGCGCCGCCTCGGTCTTTGCCGCCAACACCATCCTGCGGTC TGCAGTCGGGGCATGCTTCCCTCTCTTTGCGCGACAGATGTTTGTCAATCTGGGGGTGCAGTGGGCGGGCACATT GCTGGGGTGTCTGGCGGCGATTATGATCCCGATTCCCGTGGGGTTCATCATGTTTGGACCCGCCTTACGGCGGAG GAGCAAGTTTGCCCCGGCGGCGGCGGTGTTCCAGGAAAAGTCAGCCTAG |