Protein ID | Ani_SJS100_1|g4506.t1 |
Gene name | |
Location | scaffold_023:63655..64345 |
Strand | + |
Gene length (bp) | 690 |
Transcript length (bp) | 618 |
Coding sequence length (bp) | 618 |
Protein length (aa) | 206 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF12296 | HsbA | Hydrophobic surface binding protein A | 1.7E-08 | 46 | 155 |
SignalP signal predicted | Location | Score |
---|---|---|
Yes | 1 - 25 | 0.999466 |
Orthofinder run ID | 3 |
Orthogroup | 4814 |
Change Orthofinder run |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ani_SJS100_1|g4506.t1 MRFPILTLTLLSTILSLSSTTLDHPAPSTDYLHPRGQGTITFLGSILNNGLKILQLDKSVRYFTPERLNDVKSRS SEALQSLDEATAAGKSIGHFDPLSSHVIAALCPALKSVYSSMIYAIRDKREELTAAKYKDEMIKTLVALRVKSRE FAELVKKIITEPDGSYCLFLEDFVDKRYSKTIDEYKGIDSGGTDGVEEDIWNMED* |
Coding | >Ani_SJS100_1|g4506.t1 ATGCGCTTCCCAATCCTCACCCTCACTCTTCTCTCTACGATCCTATCCCTCTCCTCCACCACCCTCGACCACCCA GCTCCAAGCACAGACTACCTCCATCCCCGCGGTCAAGGCACCATCACCTTCCTTGGCTCCATCCTTAACAACGGG TTGAAAATCCTCCAGCTAGACAAATCCGTCCGCTACTTCACCCCCGAGCGTTTGAACGACGTCAAGTCTCGCTCC TCAGAAGCACTCCAAAGCCTCGATGAAGCAACAGCGGCTGGAAAATCCATCGGTCACTTCGATCCTCTGAGTAGT CACGTAATTGCTGCGTTATGTCCAGCTTTGAAGTCGGTCTATTCTAGTATGATCTATGCTATACGCGATAAGCGC GAGGAGCTAACCGCGGCGAAATACAAAGACGAGATGATCAAGACGCTGGTTGCTCTCCGGGTGAAAAGTCGGGAG TTCGCGGAACTTGTGAAGAAGATAATCACTGAGCCTGATGGGTCATATTGTTTGTTTCTGGAGGACTTCGTTGAT AAGCGATATTCGAAGACGATTGACGAATACAAGGGGATAGATAGCGGTGGGACAGATGGTGTGGAGGAAGATATC TGGAACATGGAAGACTAA |
Transcript | >Ani_SJS100_1|g4506.t1 ATGCGCTTCCCAATCCTCACCCTCACTCTTCTCTCTACGATCCTATCCCTCTCCTCCACCACCCTCGACCACCCA GCTCCAAGCACAGACTACCTCCATCCCCGCGGTCAAGGCACCATCACCTTCCTTGGCTCCATCCTTAACAACGGG TTGAAAATCCTCCAGCTAGACAAATCCGTCCGCTACTTCACCCCCGAGCGTTTGAACGACGTCAAGTCTCGCTCC TCAGAAGCACTCCAAAGCCTCGATGAAGCAACAGCGGCTGGAAAATCCATCGGTCACTTCGATCCTCTGAGTAGT CACGTAATTGCTGCGTTATGTCCAGCTTTGAAGTCGGTCTATTCTAGTATGATCTATGCTATACGCGATAAGCGC GAGGAGCTAACCGCGGCGAAATACAAAGACGAGATGATCAAGACGCTGGTTGCTCTCCGGGTGAAAAGTCGGGAG TTCGCGGAACTTGTGAAGAAGATAATCACTGAGCCTGATGGGTCATATTGTTTGTTTCTGGAGGACTTCGTTGAT AAGCGATATTCGAAGACGATTGACGAATACAAGGGGATAGATAGCGGTGGGACAGATGGTGTGGAGGAAGATATC TGGAACATGGAAGACTAA |
Gene | >Ani_SJS100_1|g4506.t1 ATGCGCTTCCCAATCCTCACCCTCACTCTTCTCTCTACGATCCTATCCCTCTCCTCCACCACCCTCGACCACCCA GCTCCAAGCACAGACTACCTCCATCCCCGCGGTCAAGGCACCATCACCTTCCTTGGCTCCATCCTTAACAACGGG TTGAAAATCCTCCAGCTAGACAAATCCGTCCGCTACTTCACCCCCGAGCGTTTGAACGACGTCAAGTCTCGCTCC TCAGAAGCACTCCAAAGCCTCGATGAAGCAACAGCGGCTGGAAAATCCATCGGTCACTTCGATCCTCTGAGTAGT CACGTAATTGCTGCGTTATGTCCAGCTTTGAAGTCGGTCTATTCTAGTATGATCTATGCTATACGCGATAAGGTA ATACCATTGTTTCTTTGAGGGTTTACTGGAATAGTATTGTTTCCAATTGCTAACAATGATAATCAACAGCGCGAG GAGCTAACCGCGGCGAAATACAAAGACGAGATGATCAAGACGCTGGTTGCTCTCCGGGTGAAAAGTCGGGAGTTC GCGGAACTTGTGAAGAAGATAATCACTGAGCCTGATGGGTCATATTGTTTGTTTCTGGAGGACTTCGTTGATAAG CGATATTCGAAGACGATTGACGAATACAAGGGGATAGATAGCGGTGGGACAGATGGTGTGGAGGAAGATATCTGG AACATGGAAGACTAA |