Fungal Genomics

at Utrecht University

General Properties

Protein IDAni_SJS100_1|g450.t1
Gene name
Locationscaffold_002:14318..15448
Strand-
Gene length (bp)1130
Transcript length (bp)834
Coding sequence length (bp)834
Protein length (aa) 278

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF09430 EMC7_beta-sandw ER membrane protein complex subunit 7, beta-sandwich domain 1.0E-38 38 182

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 21 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ani_SJS100_1|g450.t1
MHLSLFSLFSLLSASTLATAASAARHLTITIPPSTILPNPNILSANTHATLTTFTKNTNYNHHFAAPLTRSATFN
FHHLPASSKPESYLLDIRSPEYVFAPLRVDVAADGSLLGIWETFRGNPWDNRGAEKFVFDASAPRGGNSGAEEAV
MVEAKVLARRGFYEERSKFSPLALFKNPMILMALVALGFTFGMPKLMENMDPEMRAEFEKQSRSSPIGGATRSAM
AGGGAPGNFDLAGWMAGATPRPGASGAEAAAAVEGAAATTGRESGGASRRRG*
Coding >Ani_SJS100_1|g450.t1
ATGCATCTCTCTCTTTTCTCTCTCTTTTCCCTCCTCTCCGCGTCAACACTGGCAACCGCAGCATCCGCCGCCCGT
CATCTCACCATCACCATCCCCCCCTCGACCATCCTCCCCAACCCGAATATCCTCTCAGCCAATACTCACGCGACT
CTCACAACCTTCACAAAGAACACAAACTACAATCACCACTTCGCTGCACCCCTCACCCGCTCCGCAACCTTCAAC
TTCCACCATCTCCCCGCCTCCTCGAAGCCTGAATCCTACCTCCTCGACATCCGCTCCCCGGAGTATGTTTTCGCT
CCGCTCCGCGTCGACGTCGCTGCCGATGGCTCTCTCCTGGGTATCTGGGAGACCTTTCGCGGCAACCCCTGGGAT
AATCGCGGCGCGGAGAAGTTCGTCTTTGATGCGAGTGCTCCCCGCGGTGGTAACAGTGGAGCTGAAGAAGCTGTA
ATGGTTGAGGCGAAGGTTCTGGCCCGGAGAGGATTCTATGAGGAGAGGTCGAAGTTCTCTCCCCTGGCTTTGTTC
AAGAATCCCATGATCCTGATGGCTTTGGTGGCTCTTGGGTTCACCTTTGGAATGCCCAAGTTAATGGAGAATATG
GACCCCGAAATGCGCGCCGAATTCGAGAAACAGTCTCGCTCTTCTCCCATCGGAGGCGCAACCAGGAGTGCTATG
GCTGGCGGTGGGGCTCCCGGGAACTTCGATCTGGCTGGCTGGATGGCCGGTGCTACTCCTAGACCCGGTGCATCT
GGCGCGGAAGCTGCGGCTGCGGTTGAAGGAGCGGCTGCTACAACGGGCCGGGAGAGCGGTGGTGCATCACGGAGA
AGAGGTTGA
Transcript >Ani_SJS100_1|g450.t1
ATGCATCTCTCTCTTTTCTCTCTCTTTTCCCTCCTCTCCGCGTCAACACTGGCAACCGCAGCATCCGCCGCCCGT
CATCTCACCATCACCATCCCCCCCTCGACCATCCTCCCCAACCCGAATATCCTCTCAGCCAATACTCACGCGACT
CTCACAACCTTCACAAAGAACACAAACTACAATCACCACTTCGCTGCACCCCTCACCCGCTCCGCAACCTTCAAC
TTCCACCATCTCCCCGCCTCCTCGAAGCCTGAATCCTACCTCCTCGACATCCGCTCCCCGGAGTATGTTTTCGCT
CCGCTCCGCGTCGACGTCGCTGCCGATGGCTCTCTCCTGGGTATCTGGGAGACCTTTCGCGGCAACCCCTGGGAT
AATCGCGGCGCGGAGAAGTTCGTCTTTGATGCGAGTGCTCCCCGCGGTGGTAACAGTGGAGCTGAAGAAGCTGTA
ATGGTTGAGGCGAAGGTTCTGGCCCGGAGAGGATTCTATGAGGAGAGGTCGAAGTTCTCTCCCCTGGCTTTGTTC
AAGAATCCCATGATCCTGATGGCTTTGGTGGCTCTTGGGTTCACCTTTGGAATGCCCAAGTTAATGGAGAATATG
GACCCCGAAATGCGCGCCGAATTCGAGAAACAGTCTCGCTCTTCTCCCATCGGAGGCGCAACCAGGAGTGCTATG
GCTGGCGGTGGGGCTCCCGGGAACTTCGATCTGGCTGGCTGGATGGCCGGTGCTACTCCTAGACCCGGTGCATCT
GGCGCGGAAGCTGCGGCTGCGGTTGAAGGAGCGGCTGCTACAACGGGCCGGGAGAGCGGTGGTGCATCACGGAGA
AGAGGTTGA
Gene >Ani_SJS100_1|g450.t1
ATGCATCTCTCTCTTTTCTCTCTCTTTTCCCTCCTCTCCGCGTCAACACTGGCAACCGCAGCATCCGCCGCCCGT
CATCTCACCATCACCATCCCCCCCTCGACCATCCTCCCCAACCCGAATATCCTCTCAGCCAATACTCACGCGACT
CTCACAACCTTCACAAAGAACACAAACTACAATCACCACTTCGCTGCACCCCTCACCCGCTCCGCAACCTTCAAC
TTCCACCATCTCCCCGCCTCCTCGAAGCCTGAATCCTACCTCCTCGACATCCGCTCCCCGGAGTATGTTTTCGCT
CCGCTCCGCGTCGACGTCGCTGCCGATGGCTCTCTCCTGGGTATCTGGGAGACCTTTCGCGGCAACCCCTGGGAT
AATCGCGGCGCGGAGAAGTTCGTCTTTGATGCGAGTGCTCCCCGCGGTGGTAACAGTGGAGCTGAAGAAGCTGTA
ATGGTTGAGGCGAAGGTTCTGGCCCGGAGAGGATTCTATGAGGAGAGGTCGAAGTGTATGTTTTCCCACCCCAGT
TGTTCCCTCTTAAGTCTTGATGTTAGCTTTAGAGGACGAGGAGCATGCGTGCGCAATGGTATCTGTTCATTGAGT
GAATTACTTGGTAACCATTGAGCGCACGCGCGAGTCTTTGCACTTCATATTTCACCTTGTTTTGGATTCAGATTG
CTGACTGGGATTGAAATCATCGATATAGTCTCTCCCCTGGCTTTGTTCAAGAATCCCATGATCCTGATGGCTTTG
GTGGCTCTTGGGTTCACCTTTGGAATGCCCAAGTTAATGGAGAATAGTAAGTCCCGTCCAAAGTCCCTAGACCTC
ACTTGTTTTATATTCCTCTCGCCACGTCTATCTTGTGGATAGCTTCTTGCTAACATGCACTCTTATCAGTGGACC
CCGAAATGCGCGCCGAATTCGAGAAACAGTCTCGCTCTTCTCCCATCGGAGGCGCAACCAGGAGTGCTATGGCTG
GCGGTGGGGCTCCCGGGAACTTCGATCTGGCTGGCTGGATGGCCGGTGCTACTCCTAGACCCGGTGCATCTGGCG
CGGAAGCTGCGGCTGCGGTTGAAGGAGCGGCTGCTACAACGGGCCGGGAGAGCGGTGGTGCATCACGGAGAAGAG
GTTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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