© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ani_SJS100_1|g4489.t1 |
| Gene name | |
| Location | scaffold_023:5901..8460 |
| Strand | + |
| Gene length (bp) | 2559 |
| Transcript length (bp) | 2559 |
| Coding sequence length (bp) | 2559 |
| Protein length (aa) | 853 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF06738 | ThrE | Putative threonine/serine exporter | 4.6E-69 | 413 | 662 |
| PF06738 | ThrE | Putative threonine/serine exporter | 3.0E-06 | 698 | 775 |
| PF12821 | ThrE_2 | Threonine/Serine exporter, ThrE | 8.9E-14 | 690 | 838 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0055085 | transmembrane transport | Yes |
| GO:0022857 | transmembrane transporter activity | Yes |
| GO:0008150 | biological_process | No |
| GO:0051234 | establishment of localization | No |
| GO:0051179 | localization | No |
| GO:0009987 | cellular process | No |
| GO:0005215 | transporter activity | No |
| GO:0006810 | transport | No |
| GO:0003674 | molecular_function | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 50 | 0.45 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 521 | 539 | 18 |
| 2 | 546 | 563 | 17 |
| 3 | 573 | 595 | 22 |
| 4 | 602 | 624 | 22 |
| 5 | 644 | 666 | 22 |
| 6 | 686 | 703 | 17 |
| 7 | 713 | 730 | 17 |
| 8 | 757 | 779 | 22 |
| 9 | 821 | 843 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS100_1|g4489.t1 MSESPRHDDASYELLGRQNSWDGNDGNDDTLVPRNSGEPSAPSHPEGEPPAAATEEGAPNETTRPARVRFRSVSN HNNETVPQRPPMPRGDSEYSLRSVHSFVPTTAESTDLADYFERDHAQENDPEERKGDHPEKRSSPTADESRDTSL DKDEPQQPVSAKDRWKNASKLIRQKTVLLGERLGRPLDDVGDLGAAMLPDDLEGGYPPRRRGEEKEPLDPHGRND EAPPPPSAEAHRLVRSMTQHNMHQRRKPKSAYAKSGQETPDGLGRPDSWYGAGTPGGRGGGGILSQLLKLHAQQQ ANRDNMSMTDSSDNESVASSGTATPRRDFSAGTFSSGTATPKKEKVKWYKKSSHQSTASLVEASMNLSRASLPAS ADTLVNIPNKKGKKKRKTRLEDEIRVTVHIAEILARQRYIMQLCRALMRYGAPTHRLEEYMQMTARVLEVEGQFL YLPGCMIMSFDDPATRTAEVKLVRVVQGVDLGRLAETHNVYKNVVHDMIGVEEAIQELDLIMKRPPRFNKWILVV TYGLASVAVGPFAFDARPIDMPIIFFLGCLVGFMQHVLAPRSVLYSNVFEVTAAILTSFLARAFGSIYATVDGTH ERLFCFSALAQSSIALILPGFMVLCSSLELQSHQMIAGSIRMVYSIIYSMFLGYGITVGTTIYGLIDGDAASSTT CKNEDVWASKYIQHFIFVPIYVVFLAIINQGKWKQVPVMIVIAVCGYVTNYFSTLKLGSNSEVANTVGAFTIGLL GNLYSRLWHGHAATAILPGIFVLVPSGLASSGSLLAGIQYADEVRDNLRSGNTTATDSTSDSSIASLGFGMIQVA IGITVGLFVSALIVYPFGKRRSGLFSF* |
| Coding | >Ani_SJS100_1|g4489.t1 ATGTCGGAGTCACCACGCCATGACGATGCCTCCTATGAACTTCTAGGCCGCCAGAACAGCTGGGATGGAAACGAC GGGAACGACGACACCCTCGTCCCGCGCAATTCTGGCGAACCATCCGCCCCCTCCCACCCCGAAGGCGAACCTCCT GCTGCTGCAACAGAAGAGGGTGCCCCCAATGAAACCACCAGACCCGCGCGCGTTCGATTTCGCTCCGTCAGTAAC CATAATAATGAGACGGTGCCCCAACGCCCGCCCATGCCGCGCGGGGATTCCGAATACTCCCTGCGCTCAGTGCAT TCCTTCGTCCCGACGACCGCGGAATCGACGGATCTGGCCGACTATTTCGAACGCGATCACGCGCAGGAAAATGAC CCGGAAGAGCGAAAAGGCGACCACCCGGAAAAACGCTCCTCGCCCACCGCCGATGAATCGCGAGACACCTCCCTC GACAAAGATGAACCGCAACAACCCGTCTCCGCCAAGGACCGCTGGAAGAACGCCAGCAAATTGATTCGCCAAAAG ACCGTGCTCTTGGGTGAACGTCTCGGTCGACCCTTGGATGATGTCGGCGATTTGGGAGCCGCCATGTTGCCCGAT GATCTGGAGGGCGGCTATCCCCCCCGCCGTAGGGGCGAAGAGAAGGAGCCTCTCGATCCTCATGGCCGCAATGAC GAAGCGCCTCCCCCGCCGAGTGCCGAAGCCCATCGCCTGGTTCGCAGCATGACCCAGCACAACATGCATCAACGC CGCAAGCCCAAGTCGGCGTATGCAAAGTCGGGCCAGGAGACTCCCGATGGGCTCGGTCGTCCGGACTCGTGGTAC GGAGCTGGCACTCCTGGTGGTCGCGGCGGGGGTGGTATTCTCTCGCAGCTGCTCAAGTTACACGCACAGCAGCAG GCCAACCGGGACAACATGTCCATGACGGACTCCTCAGATAACGAGTCCGTGGCATCCTCCGGCACCGCAACGCCC AGGAGAGACTTTTCCGCGGGCACCTTCTCCTCCGGAACGGCGACGCCCAAGAAAGAGAAGGTCAAGTGGTACAAG AAGTCTAGTCATCAGTCCACCGCTTCCCTGGTGGAGGCGTCGATGAACCTCAGCCGGGCGAGTTTGCCTGCATCG GCAGACACGTTGGTCAACATTCCCAACAAGAAAGGCAAGAAGAAGCGCAAGACCCGCCTCGAGGACGAGATCCGT GTTACGGTGCACATTGCCGAGATTCTGGCCCGCCAACGATACATCATGCAGCTCTGCCGGGCGCTCATGCGCTAT GGTGCCCCCACTCATCGTCTGGAAGAGTACATGCAGATGACGGCTCGTGTTCTGGAAGTCGAAGGGCAGTTCCTG TACCTCCCCGGGTGCATGATCATGTCCTTTGACGATCCGGCCACGCGTACGGCCGAGGTCAAGCTGGTCCGTGTC GTGCAGGGAGTCGATCTGGGTCGCTTGGCAGAAACACACAATGTCTACAAGAACGTCGTTCACGACATGATCGGG GTGGAGGAGGCCATCCAGGAGCTTGATCTGATCATGAAGCGACCTCCCCGTTTCAACAAGTGGATCCTGGTGGTT ACCTACGGACTGGCAAGTGTTGCCGTCGGTCCCTTCGCCTTCGACGCCCGCCCCATTGATATGCCCATCATCTTC TTCCTCGGATGCCTCGTCGGCTTCATGCAACATGTGCTGGCGCCCCGGTCGGTGCTGTACTCGAACGTGTTTGAA GTCACGGCGGCCATTCTGACCTCGTTCCTTGCGCGAGCTTTTGGTTCCATCTATGCCACCGTGGATGGGACGCAC GAGCGCCTGTTCTGCTTCTCGGCCTTGGCTCAGTCCTCGATCGCTTTGATTCTGCCGGGTTTCATGGTACTGTGC AGCAGTCTGGAACTGCAGTCACACCAGATGATTGCCGGTTCAATCCGCATGGTCTATTCCATTATCTACTCCATG TTCCTCGGTTATGGCATCACGGTCGGCACCACCATCTATGGGCTGATTGACGGCGACGCTGCCTCGTCCACAACC TGTAAAAACGAGGATGTATGGGCCAGCAAGTATATTCAGCATTTTATCTTCGTTCCGATCTATGTGGTTTTCTTA GCCATCATCAATCAGGGCAAGTGGAAGCAAGTGCCCGTGATGATCGTCATTGCAGTCTGCGGCTACGTGACCAAC TACTTCAGCACCCTCAAGCTGGGCTCCAACTCCGAGGTCGCCAACACGGTCGGTGCATTCACCATCGGTCTGTTG GGGAATTTGTACAGTCGGCTGTGGCACGGACATGCCGCCACCGCCATTCTTCCGGGTATTTTCGTGCTCGTGCCG TCTGGCTTGGCATCCAGTGGTTCCTTGCTGGCGGGTATCCAGTATGCCGACGAGGTGCGCGACAACCTGCGATCG GGAAACACGACGGCGACCGACAGCACTTCGGACTCATCGATTGCCAGTTTGGGTTTTGGTATGATCCAGGTTGCC ATTGGCATTACGGTGGGATTGTTCGTGTCTGCCTTGATCGTCTATCCCTTCGGCAAGCGTCGCAGTGGTTTGTTC AGTTTTTAG |
| Transcript | >Ani_SJS100_1|g4489.t1 ATGTCGGAGTCACCACGCCATGACGATGCCTCCTATGAACTTCTAGGCCGCCAGAACAGCTGGGATGGAAACGAC GGGAACGACGACACCCTCGTCCCGCGCAATTCTGGCGAACCATCCGCCCCCTCCCACCCCGAAGGCGAACCTCCT GCTGCTGCAACAGAAGAGGGTGCCCCCAATGAAACCACCAGACCCGCGCGCGTTCGATTTCGCTCCGTCAGTAAC CATAATAATGAGACGGTGCCCCAACGCCCGCCCATGCCGCGCGGGGATTCCGAATACTCCCTGCGCTCAGTGCAT TCCTTCGTCCCGACGACCGCGGAATCGACGGATCTGGCCGACTATTTCGAACGCGATCACGCGCAGGAAAATGAC CCGGAAGAGCGAAAAGGCGACCACCCGGAAAAACGCTCCTCGCCCACCGCCGATGAATCGCGAGACACCTCCCTC GACAAAGATGAACCGCAACAACCCGTCTCCGCCAAGGACCGCTGGAAGAACGCCAGCAAATTGATTCGCCAAAAG ACCGTGCTCTTGGGTGAACGTCTCGGTCGACCCTTGGATGATGTCGGCGATTTGGGAGCCGCCATGTTGCCCGAT GATCTGGAGGGCGGCTATCCCCCCCGCCGTAGGGGCGAAGAGAAGGAGCCTCTCGATCCTCATGGCCGCAATGAC GAAGCGCCTCCCCCGCCGAGTGCCGAAGCCCATCGCCTGGTTCGCAGCATGACCCAGCACAACATGCATCAACGC CGCAAGCCCAAGTCGGCGTATGCAAAGTCGGGCCAGGAGACTCCCGATGGGCTCGGTCGTCCGGACTCGTGGTAC GGAGCTGGCACTCCTGGTGGTCGCGGCGGGGGTGGTATTCTCTCGCAGCTGCTCAAGTTACACGCACAGCAGCAG GCCAACCGGGACAACATGTCCATGACGGACTCCTCAGATAACGAGTCCGTGGCATCCTCCGGCACCGCAACGCCC AGGAGAGACTTTTCCGCGGGCACCTTCTCCTCCGGAACGGCGACGCCCAAGAAAGAGAAGGTCAAGTGGTACAAG AAGTCTAGTCATCAGTCCACCGCTTCCCTGGTGGAGGCGTCGATGAACCTCAGCCGGGCGAGTTTGCCTGCATCG GCAGACACGTTGGTCAACATTCCCAACAAGAAAGGCAAGAAGAAGCGCAAGACCCGCCTCGAGGACGAGATCCGT GTTACGGTGCACATTGCCGAGATTCTGGCCCGCCAACGATACATCATGCAGCTCTGCCGGGCGCTCATGCGCTAT GGTGCCCCCACTCATCGTCTGGAAGAGTACATGCAGATGACGGCTCGTGTTCTGGAAGTCGAAGGGCAGTTCCTG TACCTCCCCGGGTGCATGATCATGTCCTTTGACGATCCGGCCACGCGTACGGCCGAGGTCAAGCTGGTCCGTGTC GTGCAGGGAGTCGATCTGGGTCGCTTGGCAGAAACACACAATGTCTACAAGAACGTCGTTCACGACATGATCGGG GTGGAGGAGGCCATCCAGGAGCTTGATCTGATCATGAAGCGACCTCCCCGTTTCAACAAGTGGATCCTGGTGGTT ACCTACGGACTGGCAAGTGTTGCCGTCGGTCCCTTCGCCTTCGACGCCCGCCCCATTGATATGCCCATCATCTTC TTCCTCGGATGCCTCGTCGGCTTCATGCAACATGTGCTGGCGCCCCGGTCGGTGCTGTACTCGAACGTGTTTGAA GTCACGGCGGCCATTCTGACCTCGTTCCTTGCGCGAGCTTTTGGTTCCATCTATGCCACCGTGGATGGGACGCAC GAGCGCCTGTTCTGCTTCTCGGCCTTGGCTCAGTCCTCGATCGCTTTGATTCTGCCGGGTTTCATGGTACTGTGC AGCAGTCTGGAACTGCAGTCACACCAGATGATTGCCGGTTCAATCCGCATGGTCTATTCCATTATCTACTCCATG TTCCTCGGTTATGGCATCACGGTCGGCACCACCATCTATGGGCTGATTGACGGCGACGCTGCCTCGTCCACAACC TGTAAAAACGAGGATGTATGGGCCAGCAAGTATATTCAGCATTTTATCTTCGTTCCGATCTATGTGGTTTTCTTA GCCATCATCAATCAGGGCAAGTGGAAGCAAGTGCCCGTGATGATCGTCATTGCAGTCTGCGGCTACGTGACCAAC TACTTCAGCACCCTCAAGCTGGGCTCCAACTCCGAGGTCGCCAACACGGTCGGTGCATTCACCATCGGTCTGTTG GGGAATTTGTACAGTCGGCTGTGGCACGGACATGCCGCCACCGCCATTCTTCCGGGTATTTTCGTGCTCGTGCCG TCTGGCTTGGCATCCAGTGGTTCCTTGCTGGCGGGTATCCAGTATGCCGACGAGGTGCGCGACAACCTGCGATCG GGAAACACGACGGCGACCGACAGCACTTCGGACTCATCGATTGCCAGTTTGGGTTTTGGTATGATCCAGGTTGCC ATTGGCATTACGGTGGGATTGTTCGTGTCTGCCTTGATCGTCTATCCCTTCGGCAAGCGTCGCAGTGGTTTGTTC AGTTTTTAG |
| Gene | >Ani_SJS100_1|g4489.t1 ATGTCGGAGTCACCACGCCATGACGATGCCTCCTATGAACTTCTAGGCCGCCAGAACAGCTGGGATGGAAACGAC GGGAACGACGACACCCTCGTCCCGCGCAATTCTGGCGAACCATCCGCCCCCTCCCACCCCGAAGGCGAACCTCCT GCTGCTGCAACAGAAGAGGGTGCCCCCAATGAAACCACCAGACCCGCGCGCGTTCGATTTCGCTCCGTCAGTAAC CATAATAATGAGACGGTGCCCCAACGCCCGCCCATGCCGCGCGGGGATTCCGAATACTCCCTGCGCTCAGTGCAT TCCTTCGTCCCGACGACCGCGGAATCGACGGATCTGGCCGACTATTTCGAACGCGATCACGCGCAGGAAAATGAC CCGGAAGAGCGAAAAGGCGACCACCCGGAAAAACGCTCCTCGCCCACCGCCGATGAATCGCGAGACACCTCCCTC GACAAAGATGAACCGCAACAACCCGTCTCCGCCAAGGACCGCTGGAAGAACGCCAGCAAATTGATTCGCCAAAAG ACCGTGCTCTTGGGTGAACGTCTCGGTCGACCCTTGGATGATGTCGGCGATTTGGGAGCCGCCATGTTGCCCGAT GATCTGGAGGGCGGCTATCCCCCCCGCCGTAGGGGCGAAGAGAAGGAGCCTCTCGATCCTCATGGCCGCAATGAC GAAGCGCCTCCCCCGCCGAGTGCCGAAGCCCATCGCCTGGTTCGCAGCATGACCCAGCACAACATGCATCAACGC CGCAAGCCCAAGTCGGCGTATGCAAAGTCGGGCCAGGAGACTCCCGATGGGCTCGGTCGTCCGGACTCGTGGTAC GGAGCTGGCACTCCTGGTGGTCGCGGCGGGGGTGGTATTCTCTCGCAGCTGCTCAAGTTACACGCACAGCAGCAG GCCAACCGGGACAACATGTCCATGACGGACTCCTCAGATAACGAGTCCGTGGCATCCTCCGGCACCGCAACGCCC AGGAGAGACTTTTCCGCGGGCACCTTCTCCTCCGGAACGGCGACGCCCAAGAAAGAGAAGGTCAAGTGGTACAAG AAGTCTAGTCATCAGTCCACCGCTTCCCTGGTGGAGGCGTCGATGAACCTCAGCCGGGCGAGTTTGCCTGCATCG GCAGACACGTTGGTCAACATTCCCAACAAGAAAGGCAAGAAGAAGCGCAAGACCCGCCTCGAGGACGAGATCCGT GTTACGGTGCACATTGCCGAGATTCTGGCCCGCCAACGATACATCATGCAGCTCTGCCGGGCGCTCATGCGCTAT GGTGCCCCCACTCATCGTCTGGAAGAGTACATGCAGATGACGGCTCGTGTTCTGGAAGTCGAAGGGCAGTTCCTG TACCTCCCCGGGTGCATGATCATGTCCTTTGACGATCCGGCCACGCGTACGGCCGAGGTCAAGCTGGTCCGTGTC GTGCAGGGAGTCGATCTGGGTCGCTTGGCAGAAACACACAATGTCTACAAGAACGTCGTTCACGACATGATCGGG GTGGAGGAGGCCATCCAGGAGCTTGATCTGATCATGAAGCGACCTCCCCGTTTCAACAAGTGGATCCTGGTGGTT ACCTACGGACTGGCAAGTGTTGCCGTCGGTCCCTTCGCCTTCGACGCCCGCCCCATTGATATGCCCATCATCTTC TTCCTCGGATGCCTCGTCGGCTTCATGCAACATGTGCTGGCGCCCCGGTCGGTGCTGTACTCGAACGTGTTTGAA GTCACGGCGGCCATTCTGACCTCGTTCCTTGCGCGAGCTTTTGGTTCCATCTATGCCACCGTGGATGGGACGCAC GAGCGCCTGTTCTGCTTCTCGGCCTTGGCTCAGTCCTCGATCGCTTTGATTCTGCCGGGTTTCATGGTACTGTGC AGCAGTCTGGAACTGCAGTCACACCAGATGATTGCCGGTTCAATCCGCATGGTCTATTCCATTATCTACTCCATG TTCCTCGGTTATGGCATCACGGTCGGCACCACCATCTATGGGCTGATTGACGGCGACGCTGCCTCGTCCACAACC TGTAAAAACGAGGATGTATGGGCCAGCAAGTATATTCAGCATTTTATCTTCGTTCCGATCTATGTGGTTTTCTTA GCCATCATCAATCAGGGCAAGTGGAAGCAAGTGCCCGTGATGATCGTCATTGCAGTCTGCGGCTACGTGACCAAC TACTTCAGCACCCTCAAGCTGGGCTCCAACTCCGAGGTCGCCAACACGGTCGGTGCATTCACCATCGGTCTGTTG GGGAATTTGTACAGTCGGCTGTGGCACGGACATGCCGCCACCGCCATTCTTCCGGGTATTTTCGTGCTCGTGCCG TCTGGCTTGGCATCCAGTGGTTCCTTGCTGGCGGGTATCCAGTATGCCGACGAGGTGCGCGACAACCTGCGATCG GGAAACACGACGGCGACCGACAGCACTTCGGACTCATCGATTGCCAGTTTGGGTTTTGGTATGATCCAGGTTGCC ATTGGCATTACGGTGGGATTGTTCGTGTCTGCCTTGATCGTCTATCCCTTCGGCAAGCGTCGCAGTGGTTTGTTC AGTTTTTAG |