© 2022 - Robin Ohm - Utrecht University - The Netherlands
Built with Python Django and Wagtail
| Protein ID | Ani_SJS100_1|g4475.t1 |
| Gene name | |
| Location | scaffold_022:378521..379504 |
| Strand | - |
| Gene length (bp) | 983 |
| Transcript length (bp) | 909 |
| Coding sequence length (bp) | 909 |
| Protein length (aa) | 303 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF00226 | DnaJ | DnaJ domain | 1.5E-23 | 50 | 112 |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 47 | 0.45 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 261 | 283 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS100_1|g4475.t1 MTLPRLRPTATRLRHTTITTKTTTTPYTKPLYRTFTSSSPKPYSSAREPTYYEILDVPPTATQSEIKKKFYSLSL KHHPDRNRSDPTASNRFAQISSAYNTLSNATKRSIYDRDHHIHAHPSSTHSTANPGQHPMGSYSSYSANLHTKGA SYAGSRPASGLSKRRGQFRGPPPSFYAHGGYGGTGRRAAGAAGGGGGEGGGAKGSEDDPTSFIDRNTVWHFNAKG HYKTQTREDERRQQRRSREMAGAASINDKYLGSPGAMAVRFIVVCGILMGAGAMTGAFHNDRAGAKTTTKSVRRK EV* |
| Coding | >Ani_SJS100_1|g4475.t1 ATGACCCTCCCACGTCTACGGCCCACGGCCACCCGCCTCCGACACACCACCATCACCACCAAGACCACCACCACA CCCTATACCAAACCACTATACCGCACATTCACCTCATCATCCCCCAAACCCTACTCCTCGGCGCGCGAACCAACC TACTACGAAATCCTCGACGTGCCGCCAACCGCCACTCAATCCGAGATCAAGAAAAAATTCTACTCCCTCTCCCTA AAACACCACCCCGACCGCAACCGCAGCGACCCCACGGCATCCAACCGCTTCGCCCAAATCTCCAGCGCGTACAAC ACGCTCAGCAACGCCACAAAACGCAGTATCTACGACCGCGACCACCACATCCACGCCCACCCCTCCTCCACACAC AGCACCGCCAACCCCGGCCAACACCCCATGGGCAGCTACAGTAGCTACAGCGCAAACCTGCACACGAAGGGGGCG TCGTACGCGGGCTCGCGACCAGCTAGCGGATTGAGTAAACGGAGGGGACAGTTCCGCGGGCCGCCGCCTAGTTTC TATGCGCATGGGGGGTATGGGGGCACGGGGAGACGGGCAGCGGGTGCTGCTGGAGGGGGTGGTGGGGAGGGTGGT GGTGCAAAGGGGTCGGAGGACGATCCGACGTCATTTATTGATCGGAATACCGTGTGGCATTTTAATGCAAAGGGG CATTATAAGACGCAGACGAGGGAGGATGAGAGGAGGCAGCAACGGAGGTCGAGGGAGATGGCGGGGGCGGCATCG ATTAATGACAAGTATCTTGGGAGTCCCGGGGCAATGGCCGTGAGGTTTATTGTGGTCTGTGGGATATTGATGGGG GCGGGCGCTATGACGGGGGCGTTCCACAATGATCGGGCCGGTGCGAAGACGACGACTAAATCCGTGCGGCGGAAG GAGGTTTGA |
| Transcript | >Ani_SJS100_1|g4475.t1 ATGACCCTCCCACGTCTACGGCCCACGGCCACCCGCCTCCGACACACCACCATCACCACCAAGACCACCACCACA CCCTATACCAAACCACTATACCGCACATTCACCTCATCATCCCCCAAACCCTACTCCTCGGCGCGCGAACCAACC TACTACGAAATCCTCGACGTGCCGCCAACCGCCACTCAATCCGAGATCAAGAAAAAATTCTACTCCCTCTCCCTA AAACACCACCCCGACCGCAACCGCAGCGACCCCACGGCATCCAACCGCTTCGCCCAAATCTCCAGCGCGTACAAC ACGCTCAGCAACGCCACAAAACGCAGTATCTACGACCGCGACCACCACATCCACGCCCACCCCTCCTCCACACAC AGCACCGCCAACCCCGGCCAACACCCCATGGGCAGCTACAGTAGCTACAGCGCAAACCTGCACACGAAGGGGGCG TCGTACGCGGGCTCGCGACCAGCTAGCGGATTGAGTAAACGGAGGGGACAGTTCCGCGGGCCGCCGCCTAGTTTC TATGCGCATGGGGGGTATGGGGGCACGGGGAGACGGGCAGCGGGTGCTGCTGGAGGGGGTGGTGGGGAGGGTGGT GGTGCAAAGGGGTCGGAGGACGATCCGACGTCATTTATTGATCGGAATACCGTGTGGCATTTTAATGCAAAGGGG CATTATAAGACGCAGACGAGGGAGGATGAGAGGAGGCAGCAACGGAGGTCGAGGGAGATGGCGGGGGCGGCATCG ATTAATGACAAGTATCTTGGGAGTCCCGGGGCAATGGCCGTGAGGTTTATTGTGGTCTGTGGGATATTGATGGGG GCGGGCGCTATGACGGGGGCGTTCCACAATGATCGGGCCGGTGCGAAGACGACGACTAAATCCGTGCGGCGGAAG GAGGTTTGA |
| Gene | >Ani_SJS100_1|g4475.t1 ATGACCCTCCCACGTCTACGGCCCACGGCCACCCGCCTCCGACACACCACCATCACCACCAAGACCACCACCACA CCCTATACCAAACCACTATACCGCACATTCACCTCATCATCCCCCAAACCCTACTCCTCGGCGCGCGAACCAACC TACTACGAAATCCTCGACGTGCCGCCAACCGCCACTCAATCCGAGATCAAGAAGTAAATCTCCCCCCCATCCCCT CACCACCTAATTCCACCACCCCTATCATCATCTAATTCCTTGATAACAACAGAAAATTCTACTCCCTCTCCCTAA AACACCACCCCGACCGCAACCGCAGCGACCCCACGGCATCCAACCGCTTCGCCCAAATCTCCAGCGCGTACAACA CGCTCAGCAACGCCACAAAACGCAGTATCTACGACCGCGACCACCACATCCACGCCCACCCCTCCTCCACACACA GCACCGCCAACCCCGGCCAACACCCCATGGGCAGCTACAGTAGCTACAGCGCAAACCTGCACACGAAGGGGGCGT CGTACGCGGGCTCGCGACCAGCTAGCGGATTGAGTAAACGGAGGGGACAGTTCCGCGGGCCGCCGCCTAGTTTCT ATGCGCATGGGGGGTATGGGGGCACGGGGAGACGGGCAGCGGGTGCTGCTGGAGGGGGTGGTGGGGAGGGTGGTG GTGCAAAGGGGTCGGAGGACGATCCGACGTCATTTATTGATCGGAATACCGTGTGGCATTTTAATGCAAAGGGGC ATTATAAGACGCAGACGAGGGAGGATGAGAGGAGGCAGCAACGGAGGTCGAGGGAGATGGCGGGGGCGGCATCGA TTAATGACAAGTATCTTGGGAGTCCCGGGGCAATGGCCGTGAGGTTTATTGTGGTCTGTGGGATATTGATGGGGG CGGGCGCTATGACGGGGGCGTTCCACAATGATCGGGCCGGTGCGAAGACGACGACTAAATCCGTGCGGCGGAAGG AGGTTTGA |