Fungal Genomics

at Utrecht University

General Properties

Protein IDAni_SJS100_1|g4457.t1
Gene name
Locationscaffold_022:322048..324143
Strand+
Gene length (bp)2095
Transcript length (bp)1962
Coding sequence length (bp)1962
Protein length (aa) 654

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF09531 Ndc1_Nup Nucleoporin protein Ndc1-Nup 5.0E-204 16 641

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 25 0.5

Transmembrane Domains

Domain # Start End Length
1 21 40 19
2 50 72 22
3 213 232 19

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ani_SJS100_1|g4457.t1
MAAAQPRPYRRILTSALHRRFVHASALALLVCYVVAFAIGDKSSFLWAWFPIGGCGVRTVLLFLCSLVVFVLRVG
QMHIGARTTSSPLSTFKYLVPLDVIQTFGWYLFSAWWFTEIYRWSSSSSAHLELVNRARPHERASLNERAIYLYT
YHFLLAVAQSVVHLYYDYDRVFLSVARRVAGSADEDSRQEQSISKRLQSALPQLIKDGMKRSILVSILCPFAYAF
VLRRPAWSTTLYFAKLFWDFPRSAASPPGIIPPILGVIVRTLISGGLLVLCWQTANLFFSVFLSKEPLKRGQPLT
AEAKDPNGSLLNGLKAKKETVRAFAFWELYFISQRFPDRRKAIFNDIDREEGAVWSQILQAATDVITGVTTRISE
AKNPSSGPKPAPVQQSEPVLHSLPRLTDPPKADNIFAPSPKATTRQQKFGEALTTTARAYGNSPDWTPTARAKAR
DVLDRASSAMLSPERKQKLLGSSQDLKMLTAPSTSKPENLHPFLAQLLRSPLGRLFRQTYARRLSGIVLGTPHAN
LCSVIDATESLTCLLIKSLAEDQYGKVQADVATVVRLLTDTITTLEPFINGGLDAHWTDVNFPPSSNPEAQAAAR
RVPDVDLVLDTMKASLKDLLSSFGPYFKNLGLGAKDLRLAKEAAGVVEEDPFN*
Coding >Ani_SJS100_1|g4457.t1
ATGGCTGCAGCACAGCCTCGCCCGTATCGGCGCATCTTGACCTCTGCGCTGCACAGACGATTCGTTCATGCGTCG
GCACTGGCGCTTCTGGTCTGCTATGTAGTGGCATTTGCTATTGGCGATAAGTCATCTTTCTTGTGGGCTTGGTTC
CCCATTGGAGGATGTGGAGTTCGCACAGTTCTTCTCTTCCTCTGCAGTCTCGTTGTCTTCGTCCTCCGTGTTGGT
CAGATGCACATCGGTGCCAGGACAACCTCCTCCCCGCTTAGCACCTTCAAATACCTCGTTCCCCTCGACGTTATA
CAGACTTTTGGCTGGTACTTGTTCTCCGCCTGGTGGTTCACTGAAATCTACAGGTGGTCTTCTTCAAGTAGCGCA
CACCTGGAATTGGTGAACCGAGCTAGACCTCACGAACGAGCAAGCTTAAACGAAAGAGCAATCTACCTTTATACC
TACCACTTTCTCCTGGCAGTCGCGCAGTCAGTGGTTCATCTTTACTACGACTACGATCGTGTCTTTCTTTCCGTT
GCCAGGAGGGTCGCTGGCTCCGCTGATGAAGATAGCCGGCAGGAGCAATCGATCTCTAAACGCCTCCAGTCAGCA
TTGCCGCAGCTCATCAAAGATGGGATGAAACGGAGTATCTTGGTTTCCATTCTTTGCCCATTCGCATACGCCTTC
GTCCTCCGGCGCCCGGCATGGAGCACTACACTGTACTTTGCAAAGCTATTCTGGGATTTCCCGAGATCCGCTGCA
TCCCCTCCCGGCATTATCCCGCCAATCCTCGGAGTTATCGTGCGAACCTTGATTTCAGGAGGCCTCCTGGTTCTC
TGCTGGCAGACAGCTAACCTCTTTTTCTCCGTGTTCCTCAGCAAAGAGCCGCTCAAGCGAGGCCAGCCCTTGACG
GCTGAAGCCAAGGATCCCAACGGCAGCTTGCTGAATGGACTAAAAGCAAAGAAGGAAACCGTTCGCGCTTTTGCA
TTCTGGGAGCTGTACTTCATCAGCCAGAGATTTCCTGACCGCCGGAAGGCCATCTTCAACGACATCGATCGCGAG
GAGGGTGCAGTTTGGTCGCAAATCCTGCAAGCCGCCACAGATGTCATCACGGGCGTTACCACTCGCATCAGCGAG
GCTAAGAATCCATCATCTGGCCCTAAGCCTGCACCGGTCCAGCAGTCCGAGCCCGTCCTTCACTCCCTGCCACGG
CTGACGGACCCCCCTAAGGCGGACAACATCTTCGCTCCGTCCCCCAAGGCAACAACTCGCCAACAAAAGTTCGGC
GAAGCCCTCACCACCACCGCCAGAGCCTACGGCAACTCCCCTGACTGGACGCCTACCGCACGCGCCAAAGCCCGC
GATGTCTTGGACCGCGCCTCCTCCGCCATGCTGAGCCCTGAACGCAAGCAGAAGCTGCTCGGTTCCTCCCAGGAC
CTCAAGATGCTCACCGCGCCATCAACTAGCAAGCCCGAGAACCTGCACCCCTTCCTCGCTCAGCTCCTCCGCTCT
CCACTAGGCCGACTCTTCCGCCAAACCTACGCTCGTCGCCTCTCCGGCATTGTCCTCGGCACACCCCACGCCAAC
CTCTGCTCCGTCATCGACGCCACCGAATCCCTCACCTGCCTTCTCATCAAGAGTCTCGCGGAGGACCAATACGGA
AAGGTCCAAGCCGACGTAGCCACCGTCGTACGCCTACTGACCGATACCATCACGACCCTCGAACCTTTTATTAAC
GGCGGCCTCGATGCTCACTGGACAGACGTCAACTTCCCCCCATCCAGCAACCCGGAGGCACAAGCTGCGGCTCGC
CGTGTCCCTGATGTCGACCTCGTCCTGGACACAATGAAGGCATCCCTCAAGGACCTTCTGTCTTCATTCGGCCCT
TACTTCAAGAACCTCGGCCTTGGAGCCAAGGACTTAAGACTGGCCAAGGAAGCAGCCGGTGTCGTGGAAGAGGAT
CCCTTTAACTAA
Transcript >Ani_SJS100_1|g4457.t1
ATGGCTGCAGCACAGCCTCGCCCGTATCGGCGCATCTTGACCTCTGCGCTGCACAGACGATTCGTTCATGCGTCG
GCACTGGCGCTTCTGGTCTGCTATGTAGTGGCATTTGCTATTGGCGATAAGTCATCTTTCTTGTGGGCTTGGTTC
CCCATTGGAGGATGTGGAGTTCGCACAGTTCTTCTCTTCCTCTGCAGTCTCGTTGTCTTCGTCCTCCGTGTTGGT
CAGATGCACATCGGTGCCAGGACAACCTCCTCCCCGCTTAGCACCTTCAAATACCTCGTTCCCCTCGACGTTATA
CAGACTTTTGGCTGGTACTTGTTCTCCGCCTGGTGGTTCACTGAAATCTACAGGTGGTCTTCTTCAAGTAGCGCA
CACCTGGAATTGGTGAACCGAGCTAGACCTCACGAACGAGCAAGCTTAAACGAAAGAGCAATCTACCTTTATACC
TACCACTTTCTCCTGGCAGTCGCGCAGTCAGTGGTTCATCTTTACTACGACTACGATCGTGTCTTTCTTTCCGTT
GCCAGGAGGGTCGCTGGCTCCGCTGATGAAGATAGCCGGCAGGAGCAATCGATCTCTAAACGCCTCCAGTCAGCA
TTGCCGCAGCTCATCAAAGATGGGATGAAACGGAGTATCTTGGTTTCCATTCTTTGCCCATTCGCATACGCCTTC
GTCCTCCGGCGCCCGGCATGGAGCACTACACTGTACTTTGCAAAGCTATTCTGGGATTTCCCGAGATCCGCTGCA
TCCCCTCCCGGCATTATCCCGCCAATCCTCGGAGTTATCGTGCGAACCTTGATTTCAGGAGGCCTCCTGGTTCTC
TGCTGGCAGACAGCTAACCTCTTTTTCTCCGTGTTCCTCAGCAAAGAGCCGCTCAAGCGAGGCCAGCCCTTGACG
GCTGAAGCCAAGGATCCCAACGGCAGCTTGCTGAATGGACTAAAAGCAAAGAAGGAAACCGTTCGCGCTTTTGCA
TTCTGGGAGCTGTACTTCATCAGCCAGAGATTTCCTGACCGCCGGAAGGCCATCTTCAACGACATCGATCGCGAG
GAGGGTGCAGTTTGGTCGCAAATCCTGCAAGCCGCCACAGATGTCATCACGGGCGTTACCACTCGCATCAGCGAG
GCTAAGAATCCATCATCTGGCCCTAAGCCTGCACCGGTCCAGCAGTCCGAGCCCGTCCTTCACTCCCTGCCACGG
CTGACGGACCCCCCTAAGGCGGACAACATCTTCGCTCCGTCCCCCAAGGCAACAACTCGCCAACAAAAGTTCGGC
GAAGCCCTCACCACCACCGCCAGAGCCTACGGCAACTCCCCTGACTGGACGCCTACCGCACGCGCCAAAGCCCGC
GATGTCTTGGACCGCGCCTCCTCCGCCATGCTGAGCCCTGAACGCAAGCAGAAGCTGCTCGGTTCCTCCCAGGAC
CTCAAGATGCTCACCGCGCCATCAACTAGCAAGCCCGAGAACCTGCACCCCTTCCTCGCTCAGCTCCTCCGCTCT
CCACTAGGCCGACTCTTCCGCCAAACCTACGCTCGTCGCCTCTCCGGCATTGTCCTCGGCACACCCCACGCCAAC
CTCTGCTCCGTCATCGACGCCACCGAATCCCTCACCTGCCTTCTCATCAAGAGTCTCGCGGAGGACCAATACGGA
AAGGTCCAAGCCGACGTAGCCACCGTCGTACGCCTACTGACCGATACCATCACGACCCTCGAACCTTTTATTAAC
GGCGGCCTCGATGCTCACTGGACAGACGTCAACTTCCCCCCATCCAGCAACCCGGAGGCACAAGCTGCGGCTCGC
CGTGTCCCTGATGTCGACCTCGTCCTGGACACAATGAAGGCATCCCTCAAGGACCTTCTGTCTTCATTCGGCCCT
TACTTCAAGAACCTCGGCCTTGGAGCCAAGGACTTAAGACTGGCCAAGGAAGCAGCCGGTGTCGTGGAAGAGGAT
CCCTTTAACTAA
Gene >Ani_SJS100_1|g4457.t1
ATGGCTGCAGCACAGCCTCGCCCGTATCGGCGCATCTTGACCTCTGCGCTGCACAGACGATTCGTTCATGCGTCG
GCACTGGCGCTTCTGGTCTGCTATGTAGTGGCATTTGCTATTGGCGATAAGTCATCTTGTAAGTTTACACCAACA
CCGAGCGGCGTTTGACAAGCTGTGATCGCTAACCAGCTGTGATATCTCGATAGTCTTGTGGGCTTGGTTCCCCAT
TGGAGGATGTGGAGTTCGCACAGTTCTTCTCTTCCTCTGCAGTCTCGTTGTCTTCGTCCTCCGTGTTGGTCAGAT
GCACATCGGTGCCAGGACAACCTCCTCCCCGCTTAGCACCTTCAAATACCTCGTTCCCCTCGACGTTATACAGAC
TTTTGGCTGGTACTTGTTCTCCGCCTGGTGGTTCACTGAAATCTACAGGTGGTCTTCTTCAAGTAGCGCACACCT
GGAATTGGTGAACCGAGCTAGGTATGTTTCCTGCGACGACGAGCTCAAGCGGTTCTCTTGAATTCGCCTAACTAG
TTATGCTAGACCTCACGAACGAGCAAGCTTAAACGAAAGAGCAATCTACCTTTATACCTACCACTTTCTCCTGGC
AGTCGCGCAGTCAGTGGTTCATCTTTACTACGACTACGATCGTGTCTTTCTTTCCGTTGCCAGGAGGGTCGCTGG
CTCCGCTGATGAAGATAGCCGGCAGGAGCAATCGATCTCTAAACGCCTCCAGTCAGCATTGCCGCAGCTCATCAA
AGATGGGATGAAACGGAGTATCTTGGTTTCCATTCTTTGCCCATTCGCATACGCCTTCGTCCTCCGGCGCCCGGC
ATGGAGCACTACACTGTACTTTGCAAAGCTATTCTGGGATTTCCCGAGATCCGCTGCATCCCCTCCCGGCATTAT
CCCGCCAATCCTCGGAGTTATCGTGCGAACCTTGATTTCAGGAGGCCTCCTGGTTCTCTGCTGGCAGACAGCTAA
CCTCTTTTTCTCCGTGTTCCTCAGCAAAGAGCCGCTCAAGCGAGGCCAGCCCTTGACGGCTGAAGCCAAGGATCC
CAACGGCAGCTTGCTGAATGGACTAAAAGCAAAGAAGGAAACCGTTCGCGCTTTTGCATTCTGGGAGCTGTACTT
CATCAGCCAGAGATTTCCTGACCGCCGGAAGGCCATCTTCAACGACATCGATCGCGAGGAGGGTGCAGTTTGGTC
GCAAATCCTGCAAGCCGCCACAGATGTCATCACGGGCGTTACCACTCGCATCAGCGAGGCTAAGAATCCATCATC
TGGCCCTAAGCCTGCACCGGTCCAGCAGTCCGAGCCCGTCCTTCACTCCCTGCCACGGCTGACGGACCCCCCTAA
GGCGGACAACATCTTCGCTCCGTCCCCCAAGGCAACAACTCGCCAACAAAAGTTCGGCGAAGCCCTCACCACCAC
CGCCAGAGCCTACGGCAACTCCCCTGACTGGACGCCTACCGCACGCGCCAAAGCCCGCGATGTCTTGGACCGCGC
CTCCTCCGCCATGCTGAGCCCTGAACGCAAGCAGAAGCTGCTCGGTTCCTCCCAGGACCTCAAGATGCTCACCGC
GCCATCAACTAGCAAGCCCGAGAACCTGCACCCCTTCCTCGCTCAGCTCCTCCGCTCTCCACTAGGCCGACTCTT
CCGCCAAACCTACGCTCGTCGCCTCTCCGGCATTGTCCTCGGCACACCCCACGCCAACCTCTGCTCCGTCATCGA
CGCCACCGAATCCCTCACCTGCCTTCTCATCAAGAGTCTCGCGGAGGACCAATACGGAAAGGTCCAAGCCGACGT
AGCCACCGTCGTACGCCTACTGACCGATACCATCACGACCCTCGAACCTTTTATTAACGGCGGCCTCGATGCTCA
CTGGACAGACGTCAACTTCCCCCCATCCAGCAACCCGGAGGCACAAGCTGCGGCTCGCCGTGTCCCTGATGTCGA
CCTCGTCCTGGACACAATGAAGGCATCCCTCAAGGACCTTCTGTCTTCATTCGGCCCTTACTTCAAGAACCTCGG
CCTTGGAGCCAAGGACTTAAGACTGGCCAAGGAAGCAGCCGGTGTCGTGGAAGAGGATCCCTTTAACTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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