Fungal Genomics

at Utrecht University

General Properties

Protein ID	Ani_SJS100_1\|g4430.t1
Gene name
Location	scaffold_022:247154..247994
Strand	-
Gene length (bp)	840
Transcript length (bp)	699
Coding sequence length (bp)	699
Protein length (aa)	233

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF01105	EMP24_GP25L	emp24/gp25L/p24 family/GOLD	3.4E-49	29	226

GO

(None)

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
Yes	1 - 30	0.45

Transmembrane Domains

Domain #	Start	End	Length
1	10	32	22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Ani_SJS100_1\|g4430.t1 MAPVRSSASWLSSVMAVCAILCLSVPANALYFYMDGRQTKCFFEELPKDTLVVGTYSTAVINQQSNTYNVDPNLK MLVTVDEIFDNDHRVVSKRDSHSGRFTFSAADAGLHKICVTPETNAATGGGWLSGAPSGAVQVTLDMAIGETSKI ETEDKDKMQDIVQKVKDLNGRLQDIRREQVFQREREAEFRDQSEATNSRVVRWTLIQLAVLSVACAWQLSHLRSF FIKQKLT*
Coding	>Ani_SJS100_1\|g4430.t1 ATGGCTCCGGTCAGATCCTCCGCCTCATGGCTGTCCTCTGTGATGGCCGTGTGTGCCATCCTGTGTCTCTCGGTG CCCGCCAACGCCCTCTACTTCTACATGGACGGCCGCCAAACAAAGTGCTTCTTTGAGGAGCTCCCTAAAGATACC CTGGTTGTCGGTACCTACTCCACCGCCGTGATCAACCAGCAATCCAACACCTACAATGTGGACCCTAACCTTAAG ATGCTCGTCACCGTCGACGAGATCTTCGACAACGACCACCGCGTCGTCTCCAAGCGTGACAGCCACTCCGGACGC TTTACCTTCTCCGCTGCCGACGCCGGCCTGCACAAGATCTGCGTGACCCCCGAGACCAACGCCGCAACTGGCGGT GGCTGGCTGTCGGGCGCCCCGTCCGGTGCGGTCCAGGTCACTCTGGACATGGCTATCGGTGAAACGAGCAAGATT GAGACGGAAGACAAGGACAAGATGCAGGATATTGTGCAGAAGGTGAAGGATCTGAACGGCCGGTTGCAGGATATT CGTAGGGAGCAGGTGTTCCAGCGGGAACGTGAAGCTGAATTCCGTGACCAGTCCGAGGCCACCAACTCCCGCGTG GTTCGGTGGACTCTCATCCAGCTGGCTGTGCTGTCGGTGGCATGTGCTTGGCAGCTTTCGCATCTGCGGTCGTTC TTCATCAAGCAGAAGTTGACATAA
Transcript	>Ani_SJS100_1\|g4430.t1 ATGGCTCCGGTCAGATCCTCCGCCTCATGGCTGTCCTCTGTGATGGCCGTGTGTGCCATCCTGTGTCTCTCGGTG CCCGCCAACGCCCTCTACTTCTACATGGACGGCCGCCAAACAAAGTGCTTCTTTGAGGAGCTCCCTAAAGATACC CTGGTTGTCGGTACCTACTCCACCGCCGTGATCAACCAGCAATCCAACACCTACAATGTGGACCCTAACCTTAAG ATGCTCGTCACCGTCGACGAGATCTTCGACAACGACCACCGCGTCGTCTCCAAGCGTGACAGCCACTCCGGACGC TTTACCTTCTCCGCTGCCGACGCCGGCCTGCACAAGATCTGCGTGACCCCCGAGACCAACGCCGCAACTGGCGGT GGCTGGCTGTCGGGCGCCCCGTCCGGTGCGGTCCAGGTCACTCTGGACATGGCTATCGGTGAAACGAGCAAGATT GAGACGGAAGACAAGGACAAGATGCAGGATATTGTGCAGAAGGTGAAGGATCTGAACGGCCGGTTGCAGGATATT CGTAGGGAGCAGGTGTTCCAGCGGGAACGTGAAGCTGAATTCCGTGACCAGTCCGAGGCCACCAACTCCCGCGTG GTTCGGTGGACTCTCATCCAGCTGGCTGTGCTGTCGGTGGCATGTGCTTGGCAGCTTTCGCATCTGCGGTCGTTC TTCATCAAGCAGAAGTTGACATAA
Gene	>Ani_SJS100_1\|g4430.t1 ATGGCTCCGGTCAGATCCTCCGCCTCATGGCTGTCCTCTGTGATGGCCGTGTGTGCCATCCTGTGTCTCTCGGTG CCCGCCAACGCCCTCTACTTCTACATGGACGGCCGCCAAACAAAGTGCTTCTTTGAGGAGCTCCCTAAAGATACC CTGGTTGTCGGTATGCTTCTCACCACGTGCTCCCTCAATTTATTTACCACTTAATTCTAATACGATGTGGGAATA ATAAAGGTACCTACTCCACCGCCGTGATCAACCAGCAATCCAACACCTACAATGTGGACCCTAACCTTAAGATGC TCGTCACCGTCGACGAGATCTTCGACAACGACCACCGCGTCGTCTCCAAGCGTGACAGCCACTCCGGACGCTTTA CCTTCTCCGCTGCCGACGCCGGCCTGCACAAGATCTGCGTGACCCCCGAGACCAACGCCGCAACTGGCGGTGGCT GGCTGTCGGGCGCCCCGTCCGGTGCGGTCCAGGTCACTCTGGACATGGCTATCGGTGAAACGAGCAAGATTGAGA CGGAAGACAAGGACAAGATGCAGGATATTGTGCAGAAGGTGAAGGATCTGAACGGCCGGTTGCAGGATATTCGTA GGGAGCAGGTGTTCCAGCGGGTATGTTTTCCACCACCGGGATGCCATAGGCAGGATCTTTAGTGACTTGACTAAC AATCTGTTTAAACAGGAACGTGAAGCTGAATTCCGTGACCAGTCCGAGGCCACCAACTCCCGCGTGGTTCGGTGG ACTCTCATCCAGCTGGCTGTGCTGTCGGTGGCATGTGCTTGGCAGCTTTCGCATCTGCGGTCGTTCTTCATCAAG CAGAAGTTGACATAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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