© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ani_SJS100_1|g4422.t1 |
| Gene name | |
| Location | scaffold_022:219177..220787 |
| Strand | - |
| Gene length (bp) | 1610 |
| Transcript length (bp) | 1422 |
| Coding sequence length (bp) | 1422 |
| Protein length (aa) | 474 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF00097 | zf-C3HC4 | Zinc finger, C3HC4 type (RING finger) | 6.9E-08 | 49 | 89 |
| PF13639 | zf-RING_2 | Ring finger domain | 1.4E-07 | 48 | 90 |
| PF13923 | zf-C3HC4_2 | Zinc finger, C3HC4 type (RING finger) | 1.7E-07 | 48 | 89 |
| PF13920 | zf-C3HC4_3 | Zinc finger, C3HC4 type (RING finger) | 2.3E-07 | 47 | 94 |
| PF13445 | zf-RING_UBOX | RING-type zinc-finger | 1.4E-05 | 49 | 87 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0046872 | metal ion binding | Yes |
| GO:0043169 | cation binding | No |
| GO:0005488 | binding | No |
| GO:0043167 | ion binding | No |
| GO:0003674 | molecular_function | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 21 | 0.45 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS100_1|g4422.t1 MSEPTPAGAALSNGSESTSTSNVNTGDNASGLFQTLQGHVDDIRSLLQCGVCIRPLYEPYTLACGHTFCYSCLTS WFVGGRHNKTCPDCRAPVKAQPAPAYLVRAVVQMFTSRPELLDKGETTDEHLSHQREEAERLEKDKANTHPREGG LFRGTFNKKLPVAQPIVDLEDNVVRCPRCSWELEEDEGCAQCGYRQDDESVTGSSGWSESDENSEMTDYLEDDDE IEDGFGDADEYGWDPSHDQLPLDIQPADIDQLYRQWYGLAPGDLPGVRTTGPFRRQNHYGWPSGVSSALEEDSDM DDEDEDADMDSFIDDDLEHDDYSESDRSTVVGRHEISVTHTIGTDLSTFDEMSEESDEESLDDESHDDDDDDDDD DDEDPILPPVGGIRRNRIQTYRIQSSSPSCENGTSGTASGRSESRSQGDIRHDPRLQQQVSAGSTVMNAISVDDD SDEGPVRPTRRTRDRGNRRPSAY* |
| Coding | >Ani_SJS100_1|g4422.t1 ATGTCCGAACCTACCCCCGCTGGAGCTGCCTTGAGCAATGGCTCCGAGAGCACCAGCACATCAAATGTCAATACT GGAGATAACGCGTCAGGGCTCTTTCAAACCCTGCAAGGTCATGTCGACGATATCCGTTCTCTCCTACAATGCGGC GTTTGCATCCGACCACTTTATGAACCCTATACCCTTGCCTGCGGACATACTTTTTGCTACAGTTGTCTAACATCA TGGTTTGTTGGTGGGAGGCACAACAAGACATGCCCGGACTGTCGAGCACCGGTGAAAGCGCAACCAGCTCCTGCT TACTTGGTCCGCGCTGTTGTTCAAATGTTCACAAGTCGCCCGGAGCTGCTTGATAAGGGCGAGACCACAGACGAA CACCTAAGCCATCAACGCGAAGAAGCGGAGCGACTGGAAAAAGACAAGGCCAACACACACCCGCGGGAAGGGGGC CTGTTCCGTGGTACGTTCAACAAGAAGCTTCCAGTCGCGCAACCTATCGTGGACCTCGAGGACAATGTTGTGCGT TGTCCACGTTGTTCCTGGGAGCTAGAGGAAGATGAAGGATGTGCACAATGCGGGTATCGACAAGATGATGAGTCT GTGACTGGCAGTTCAGGCTGGAGTGAGTCAGACGAAAACTCCGAGATGACGGACTATTTGGAAGACGATGATGAG ATTGAAGATGGGTTTGGGGACGCGGATGAATATGGCTGGGATCCCAGCCATGACCAGCTGCCCCTTGATATTCAA CCTGCCGACATAGACCAACTTTATCGTCAGTGGTATGGCCTAGCGCCTGGCGACCTTCCGGGTGTGCGCACAACT GGGCCTTTTCGCCGGCAGAACCATTATGGCTGGCCTTCTGGAGTTTCGTCAGCTCTCGAGGAAGATAGCGACATG GATGATGAGGACGAGGATGCAGACATGGATTCGTTCATCGACGATGACTTGGAACACGATGATTATTCCGAATCT GACCGATCCACAGTGGTTGGGCGGCATGAAATTTCCGTCACCCACACTATTGGAACTGACTTGTCAACCTTTGAT GAGATGTCTGAGGAAAGCGACGAGGAGAGCCTGGACGATGAAAGTCATGATGATGACGACGATGACGATGACGAT GACGACGAGGATCCGATTCTGCCTCCTGTTGGTGGCATTCGGCGCAATCGCATCCAAACCTACCGAATACAGTCG AGTTCGCCATCTTGCGAGAATGGGACTTCCGGTACAGCGTCGGGACGCAGTGAATCCAGATCCCAGGGAGATATC CGTCATGATCCGCGGTTACAACAGCAAGTGTCCGCTGGATCTACTGTCATGAATGCAATCAGCGTGGATGACGAT TCTGACGAAGGCCCCGTGCGACCAACTAGGCGGACAAGAGACAGGGGCAATCGCCGACCCTCGGCCTACTAA |
| Transcript | >Ani_SJS100_1|g4422.t1 ATGTCCGAACCTACCCCCGCTGGAGCTGCCTTGAGCAATGGCTCCGAGAGCACCAGCACATCAAATGTCAATACT GGAGATAACGCGTCAGGGCTCTTTCAAACCCTGCAAGGTCATGTCGACGATATCCGTTCTCTCCTACAATGCGGC GTTTGCATCCGACCACTTTATGAACCCTATACCCTTGCCTGCGGACATACTTTTTGCTACAGTTGTCTAACATCA TGGTTTGTTGGTGGGAGGCACAACAAGACATGCCCGGACTGTCGAGCACCGGTGAAAGCGCAACCAGCTCCTGCT TACTTGGTCCGCGCTGTTGTTCAAATGTTCACAAGTCGCCCGGAGCTGCTTGATAAGGGCGAGACCACAGACGAA CACCTAAGCCATCAACGCGAAGAAGCGGAGCGACTGGAAAAAGACAAGGCCAACACACACCCGCGGGAAGGGGGC CTGTTCCGTGGTACGTTCAACAAGAAGCTTCCAGTCGCGCAACCTATCGTGGACCTCGAGGACAATGTTGTGCGT TGTCCACGTTGTTCCTGGGAGCTAGAGGAAGATGAAGGATGTGCACAATGCGGGTATCGACAAGATGATGAGTCT GTGACTGGCAGTTCAGGCTGGAGTGAGTCAGACGAAAACTCCGAGATGACGGACTATTTGGAAGACGATGATGAG ATTGAAGATGGGTTTGGGGACGCGGATGAATATGGCTGGGATCCCAGCCATGACCAGCTGCCCCTTGATATTCAA CCTGCCGACATAGACCAACTTTATCGTCAGTGGTATGGCCTAGCGCCTGGCGACCTTCCGGGTGTGCGCACAACT GGGCCTTTTCGCCGGCAGAACCATTATGGCTGGCCTTCTGGAGTTTCGTCAGCTCTCGAGGAAGATAGCGACATG GATGATGAGGACGAGGATGCAGACATGGATTCGTTCATCGACGATGACTTGGAACACGATGATTATTCCGAATCT GACCGATCCACAGTGGTTGGGCGGCATGAAATTTCCGTCACCCACACTATTGGAACTGACTTGTCAACCTTTGAT GAGATGTCTGAGGAAAGCGACGAGGAGAGCCTGGACGATGAAAGTCATGATGATGACGACGATGACGATGACGAT GACGACGAGGATCCGATTCTGCCTCCTGTTGGTGGCATTCGGCGCAATCGCATCCAAACCTACCGAATACAGTCG AGTTCGCCATCTTGCGAGAATGGGACTTCCGGTACAGCGTCGGGACGCAGTGAATCCAGATCCCAGGGAGATATC CGTCATGATCCGCGGTTACAACAGCAAGTGTCCGCTGGATCTACTGTCATGAATGCAATCAGCGTGGATGACGAT TCTGACGAAGGCCCCGTGCGACCAACTAGGCGGACAAGAGACAGGGGCAATCGCCGACCCTCGGCCTACTAA |
| Gene | >Ani_SJS100_1|g4422.t1 ATGTCCGAACCTACCCCCGCTGGAGCTGCCTTGAGCAATGGCTCCGAGAGCACCAGCACATCAAATGTCAATACT GGAGATAACGCGTCAGGGGTGAGCTTCCATTTGTAGGGTCAAGCCTTTCATGCGCTGATATATATCGTTTTTTTT TTTAGCTCTTTCAAACCCTGCAAGGTCATGTCGACGATATCCGTTCTCTCCTACAATGCGGCGTTTGCATCCGAC CACTTTATGAACCCTATACCCTTGCCTGCGGACATACTTTTTGCTACAGTGTCAGTATCGCCAATCTCGACGACA CTCATAAGTTCTGGCGTCTAACCTTTCGCTCTAGTGTCTAACATCATGGTTTGTTGGTGGGAGGCACAACAAGAC ATGCCCGGACTGTCGAGCACCGGTGAAAGCGCAACCAGCTCCTGCTTACTTGGTAGGCCTCTGCATATCATACTT GTTTCTGATCCGATGCTCAACAGGCACTAACTGAAATACTCAAGGTCCGCGCTGTTGTTCAAATGTTCACAAGTC GCCCGGAGCTGCTTGATAAGGGCGAGACCACAGACGAACACCTAAGCCATCAACGCGAAGAAGCGGAGCGACTGG AAAAAGACAAGGCCAACACACACCCGCGGGAAGGGGGCCTGTTCCGTGGTACGTTCAACAAGAAGCTTCCAGTCG CGCAACCTATCGTGGACCTCGAGGACAATGTTGTGCGTTGTCCACGTTGTTCCTGGGAGCTAGAGGAAGATGAAG GATGTGCACAATGCGGGTATCGACAAGATGATGAGTCTGTGACTGGCAGTTCAGGCTGGAGTGAGTCAGACGAAA ACTCCGAGATGACGGACTATTTGGAAGACGATGATGAGATTGAAGATGGGTTTGGGGACGCGGATGAATATGGCT GGGATCCCAGCCATGACCAGCTGCCCCTTGATATTCAACCTGCCGACATAGACCAACTTTATCGTCAGTGGTATG GCCTAGCGCCTGGCGACCTTCCGGGTGTGCGCACAACTGGGCCTTTTCGCCGGCAGAACCATTATGGCTGGCCTT CTGGAGTTTCGTCAGCTCTCGAGGAAGATAGCGACATGGATGATGAGGACGAGGATGCAGACATGGATTCGTTCA TCGACGATGACTTGGAACACGATGATTATTCCGAATCTGACCGATCCACAGTGGTTGGGCGGCATGAAATTTCCG TCACCCACACTATTGGAACTGACTTGTCAACCTTTGATGAGATGTCTGAGGAAAGCGACGAGGAGAGCCTGGACG ATGAAAGTCATGATGATGACGACGATGACGATGACGATGACGACGAGGATCCGATTCTGCCTCCTGTTGGTGGCA TTCGGCGCAATCGCATCCAAACCTACCGAATACAGTCGAGTTCGCCATCTTGCGAGAATGGGACTTCCGGTACAG CGTCGGGACGCAGTGAATCCAGATCCCAGGGAGATATCCGTCATGATCCGCGGTTACAACAGCAAGTGTCCGCTG GATCTACTGTCATGAATGCAATCAGCGTGGATGACGATTCTGACGAAGGCCCCGTGCGACCAACTAGGCGGACAA GAGACAGGGGCAATCGCCGACCCTCGGCCTACTAA |