Fungal Genomics

at Utrecht University

General Properties

Protein IDAni_SJS100_1|g441.t1
Gene name
Locationscaffold_001:1445755..1447035
Strand+
Gene length (bp)1280
Transcript length (bp)1152
Coding sequence length (bp)1152
Protein length (aa) 384

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PFAM Domains

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 44 0.45

Transmembrane Domains

Domain # Start End Length
1 228 250 22
2 262 284 22
3 304 326 22
4 353 375 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ani_SJS100_1|g441.t1
MAHDVRDSHLQPPDAAPLSDEQLSEQPSATEWMSAQSNHSTGALHSDNDIVHPHDAVDYSAGHSRSPESTVVGEF
DNIPAMGKKPRTLPAWIRSVEYTEDEADAAVTDRLLPSQPGEAVVAQHNHSPYAASRPTLSSGQGESSRGIIGRE
RESRWKNFSRDIAYPREQGVQEKPVTPDWLNENLGDYSEPWRGQGEPDEDTEDPLRMRRRREIWFKRFHNTLLKS
PMVPLIFRLTVWCFSLTALALGGSIQHLSGKYQHPQGPSALMAIIVDAVALVYLVYITFDEYTSKPLGLRSPSAK
ARLILLDIFFIVFDSANLSLAFESLSTVRGACTMAEVNQEVAPKNDAICDRQIALACVLLIALLAWLTTFSISVL
RLVERVAS*
Coding >Ani_SJS100_1|g441.t1
ATGGCACACGATGTGCGCGACTCACATTTGCAGCCTCCGGATGCCGCTCCGCTCTCCGACGAACAGCTGTCGGAG
CAACCATCCGCTACCGAGTGGATGTCGGCGCAATCAAACCATTCGACTGGCGCGCTCCACAGCGACAACGATATC
GTTCACCCACATGATGCAGTAGACTACTCGGCTGGACACTCACGTTCGCCAGAGAGTACAGTCGTGGGCGAATTC
GACAACATCCCGGCAATGGGGAAGAAACCTCGGACTTTACCAGCATGGATCCGTTCGGTAGAGTATACGGAGGAC
GAGGCAGATGCAGCTGTCACAGATCGGCTGCTTCCATCACAGCCCGGAGAAGCCGTTGTCGCCCAGCACAACCAT
TCGCCGTATGCGGCATCAAGACCTACCCTTTCGAGTGGACAGGGCGAAAGTAGCAGAGGTATCATCGGACGAGAG
CGCGAGTCGCGCTGGAAGAACTTTTCCAGGGACATCGCATATCCCCGAGAACAAGGAGTTCAAGAGAAACCCGTC
ACGCCGGACTGGTTGAATGAGAACCTCGGTGATTATTCTGAACCCTGGCGAGGTCAGGGCGAACCGGATGAAGAT
ACCGAAGACCCCTTGAGGATGAGACGACGACGAGAAATCTGGTTCAAGCGCTTCCACAACACGCTTCTCAAGAGT
CCTATGGTCCCATTAATCTTTCGACTTACGGTGTGGTGTTTTTCCCTCACTGCATTGGCTCTTGGGGGCTCTATC
CAGCATCTCTCAGGGAAGTACCAGCATCCCCAAGGCCCCTCTGCGCTAATGGCAATTATCGTCGATGCGGTTGCC
TTGGTCTACCTCGTTTACATTACATTTGACGAATACACATCCAAGCCGTTGGGTCTTCGCTCTCCATCCGCCAAG
GCACGACTCATTCTTCTGGATATCTTTTTCATTGTATTCGACTCCGCCAATCTCAGTTTGGCGTTCGAATCACTC
TCGACTGTGAGGGGCGCATGTACAATGGCTGAAGTGAACCAAGAAGTTGCGCCGAAAAACGACGCAATATGCGAC
CGGCAGATCGCCCTAGCTTGTGTGCTGCTGATTGCGCTGCTAGCCTGGCTCACCACCTTTTCTATCAGTGTCCTC
AGACTTGTCGAACGAGTTGCTTCATGA
Transcript >Ani_SJS100_1|g441.t1
ATGGCACACGATGTGCGCGACTCACATTTGCAGCCTCCGGATGCCGCTCCGCTCTCCGACGAACAGCTGTCGGAG
CAACCATCCGCTACCGAGTGGATGTCGGCGCAATCAAACCATTCGACTGGCGCGCTCCACAGCGACAACGATATC
GTTCACCCACATGATGCAGTAGACTACTCGGCTGGACACTCACGTTCGCCAGAGAGTACAGTCGTGGGCGAATTC
GACAACATCCCGGCAATGGGGAAGAAACCTCGGACTTTACCAGCATGGATCCGTTCGGTAGAGTATACGGAGGAC
GAGGCAGATGCAGCTGTCACAGATCGGCTGCTTCCATCACAGCCCGGAGAAGCCGTTGTCGCCCAGCACAACCAT
TCGCCGTATGCGGCATCAAGACCTACCCTTTCGAGTGGACAGGGCGAAAGTAGCAGAGGTATCATCGGACGAGAG
CGCGAGTCGCGCTGGAAGAACTTTTCCAGGGACATCGCATATCCCCGAGAACAAGGAGTTCAAGAGAAACCCGTC
ACGCCGGACTGGTTGAATGAGAACCTCGGTGATTATTCTGAACCCTGGCGAGGTCAGGGCGAACCGGATGAAGAT
ACCGAAGACCCCTTGAGGATGAGACGACGACGAGAAATCTGGTTCAAGCGCTTCCACAACACGCTTCTCAAGAGT
CCTATGGTCCCATTAATCTTTCGACTTACGGTGTGGTGTTTTTCCCTCACTGCATTGGCTCTTGGGGGCTCTATC
CAGCATCTCTCAGGGAAGTACCAGCATCCCCAAGGCCCCTCTGCGCTAATGGCAATTATCGTCGATGCGGTTGCC
TTGGTCTACCTCGTTTACATTACATTTGACGAATACACATCCAAGCCGTTGGGTCTTCGCTCTCCATCCGCCAAG
GCACGACTCATTCTTCTGGATATCTTTTTCATTGTATTCGACTCCGCCAATCTCAGTTTGGCGTTCGAATCACTC
TCGACTGTGAGGGGCGCATGTACAATGGCTGAAGTGAACCAAGAAGTTGCGCCGAAAAACGACGCAATATGCGAC
CGGCAGATCGCCCTAGCTTGTGTGCTGCTGATTGCGCTGCTAGCCTGGCTCACCACCTTTTCTATCAGTGTCCTC
AGACTTGTCGAACGAGTTGCTTCATGA
Gene >Ani_SJS100_1|g441.t1
ATGGCACACGATGTGCGCGACTCACATTTGCAGCCTCCGGATGCCGCTCCGCTCTCCGACGAACAGCTGTCGGAG
CAACCATCCGCTACCGAGTGGATGTCGGCGCAATCAAACCATTCGACTGGCGCGCTCCACAGCGACAACGATATC
GTTCACCCACATGATGCAGTAGACTACTCGGCTGGACACTCACGTTCGCCAGAGAGTACAGTCGTGGGCGAATTC
GACAACATCCCGGCAATGGGGAAGAAACCTCGGACTTTACCAGGTGAGTTTCCCTTTGTGTCCTGATCGATCTCG
GATTCACCGGGTGAAGTCAACTAACCAACGATAACCTGTATAGCATGGATCCGTTCGGTAGAGTATACGGAGGAC
GAGGCAGATGCAGCTGTCACAGATCGGCTGCTTCCATCACAGCCCGGAGAAGCCGTTGTCGCCCAGCACAACCAT
TCGCCGTATGCGGCATCAAGACCTACCCTTTCGAGTGGACAGGGCGAAAGTAGCAGAGGTATCATCGGACGAGAG
CGCGAGTCGCGCTGGAAGAACTTTTCCAGGGACATCGCATATCCCCGAGAACAAGGAGTTCAAGAGAAACCCGTC
ACGCCGGACTGGTTGAATGAGAACCTCGGTGATTATTCTGAACCCTGGCGAGGTCAGGGCGAACCGGATGAAGAT
ACCGAAGACCCCTTGAGGATGAGACGACGACGAGAAATCTGGTTCAAGCGCTTCCACAACACGCTTCTCAAGAGT
CCTATGGTCCCATTAATCTTTCGACTTACGGTGTGGTGTTTTTCCCTCACTGCATTGGCTCTTGGGGGCTCTATC
CAGCATCTCTCAGGGAAGTACCAGCATCCCCAAGGCCCCTCTGCGCTAATGGCAATTATCGTCGATGCGGTTGCC
TTGGTCTACCTCGTTTACATTACATTTGACGAATACACATCCAAGCCGTTGGGTCTTCGCTCTCCATCCGCCAAG
GCACGACTCATTCTTCTGGATATCTTTTTCATTGTATTCGACTCCGCCAATCTCAGTTTGGCGTTCGAATCACTC
TCGACTGTGAGGGGCGCATGTACAATGGCTGAAGTGAACCAAGAAGTTGCGCCGAAAAACGACGCAATATGCGAC
CGGCAGATCGCCCTAGCTTGTGTGCTGCTGATTGCGCTGCTAGCCTGGCTCACCACCTTTTCTATCAGTGTCCTC
AGGTACGAGAGTCTGCCATGTTACACAGATGACGATACTGACAGCTTCGATTTAGACTTGTCGAACGAGTTGCTT
CATGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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