Fungal Genomics

at Utrecht University

General Properties

Protein IDAni_SJS100_1|g4405.t1
Gene name
Locationscaffold_022:177122..178105
Strand-
Gene length (bp)983
Transcript length (bp)639
Coding sequence length (bp)639
Protein length (aa) 213

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00160 Pro_isomerase Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 5.1E-49 39 193

GO

GO Term Description Terminal node
GO:0000413 protein peptidyl-prolyl isomerization Yes
GO:0003755 peptidyl-prolyl cis-trans isomerase activity Yes
GO:0003674 molecular_function No
GO:0018208 peptidyl-proline modification No
GO:0140096 catalytic activity, acting on a protein No
GO:0043170 macromolecule metabolic process No
GO:0071704 organic substance metabolic process No
GO:0016853 isomerase activity No
GO:0016859 cis-trans isomerase activity No
GO:0019538 protein metabolic process No
GO:0044238 primary metabolic process No
GO:0043412 macromolecule modification No
GO:0008152 metabolic process No
GO:1901564 organonitrogen compound metabolic process No
GO:0018193 peptidyl-amino acid modification No
GO:0008150 biological_process No
GO:0006807 nitrogen compound metabolic process No
GO:0036211 protein modification process No
GO:0003824 catalytic activity No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 24 0.45

Transmembrane Domains

Domain # Start End Length
1 5 23 18

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ani_SJS100_1|g4405.t1
MNFKNIFLSFFFVLAVGLALVHAEDAQPRGPKITSKVFFDIEHGDKPLGRVVLGLYGKTVPKTAENFRALATGEK
GFGYEGSTFHRVIKDFMIQGGDFTRGDGTGGKSIYGEKFADENFKLRHTRKGLLSMANAGKDTNGSQFFITTVPT
PWLDGRHVVFGEVLEGYEIVAQIENVPKGRSDRPVETVKIVKSGELESEDKAGEKGSSHEEL*
Coding >Ani_SJS100_1|g4405.t1
ATGAACTTCAAGAACATTTTTCTATCTTTCTTCTTCGTCCTGGCGGTTGGACTTGCTCTTGTCCACGCCGAAGAT
GCTCAGCCCCGGGGCCCCAAGATCACCAGTAAGGTGTTCTTTGATATAGAGCACGGAGACAAGCCTCTGGGCAGA
GTCGTGCTTGGCTTGTATGGCAAGACTGTTCCTAAGACCGCTGAGAACTTCCGCGCTCTCGCTACTGGTGAGAAG
GGCTTTGGCTATGAAGGATCTACCTTCCACCGTGTCATTAAGGACTTCATGATCCAGGGTGGTGACTTCACTCGT
GGCGATGGTACCGGTGGAAAGTCGATCTACGGTGAGAAGTTTGCCGACGAAAACTTCAAGCTGAGGCATACGCGC
AAGGGGCTCCTGAGCATGGCCAACGCCGGCAAGGACACCAACGGCTCCCAGTTCTTCATCACCACCGTTCCTACA
CCTTGGCTTGATGGCCGCCATGTCGTCTTCGGTGAAGTGCTCGAGGGCTACGAGATCGTCGCTCAGATTGAGAAC
GTGCCCAAGGGCCGTTCTGACAGACCCGTGGAGACTGTCAAGATCGTCAAGAGTGGAGAGTTGGAGTCTGAGGAC
AAGGCTGGAGAAAAAGGTAGCAGCCACGAGGAGCTGTAG
Transcript >Ani_SJS100_1|g4405.t1
ATGAACTTCAAGAACATTTTTCTATCTTTCTTCTTCGTCCTGGCGGTTGGACTTGCTCTTGTCCACGCCGAAGAT
GCTCAGCCCCGGGGCCCCAAGATCACCAGTAAGGTGTTCTTTGATATAGAGCACGGAGACAAGCCTCTGGGCAGA
GTCGTGCTTGGCTTGTATGGCAAGACTGTTCCTAAGACCGCTGAGAACTTCCGCGCTCTCGCTACTGGTGAGAAG
GGCTTTGGCTATGAAGGATCTACCTTCCACCGTGTCATTAAGGACTTCATGATCCAGGGTGGTGACTTCACTCGT
GGCGATGGTACCGGTGGAAAGTCGATCTACGGTGAGAAGTTTGCCGACGAAAACTTCAAGCTGAGGCATACGCGC
AAGGGGCTCCTGAGCATGGCCAACGCCGGCAAGGACACCAACGGCTCCCAGTTCTTCATCACCACCGTTCCTACA
CCTTGGCTTGATGGCCGCCATGTCGTCTTCGGTGAAGTGCTCGAGGGCTACGAGATCGTCGCTCAGATTGAGAAC
GTGCCCAAGGGCCGTTCTGACAGACCCGTGGAGACTGTCAAGATCGTCAAGAGTGGAGAGTTGGAGTCTGAGGAC
AAGGCTGGAGAAAAAGGTAGCAGCCACGAGGAGCTGTAG
Gene >Ani_SJS100_1|g4405.t1
ATGAACTTCAAGAACATTTTTCTATCTTTCTTCTTCGTCCTGGCGGTTGGACTTGCTCTTGTCCACGCCGAAGAT
GCTCAGCCCCGGGGCCCCAAGATCACCAGTAAGGTGTGTATAGTTATGATTTTCGGCGCTTACAACCAGTGTCGA
CTTCTTTCCAAATATGACATACTAATTGCATCTACATACAGGTGTTCTTTGATATAGAGCACGGAGACAAGCCTC
TGGGCAGAGTCGTGCTTGGCTTGTATGGCAAGACTGTTCCTAAGGTACGTGATCGTCGCCATGCTATTATCTCTC
GGAGCTCCTGTACTGATCATATTATTATTGCTTTTCTAGACCGCTGAGAACTTCCGGTATGATTTCAGGACTCGA
TCTCAGATGAAGCTTCTGCACCCTGCTGACATTGCTCGGTTCCAGCGCTCTCGCTACTGGTGAGAAGGGCTTTGG
CTATGAAGGATCTACCTTCCACCGTGTCATTAAGGACTTCATGATCCAGGGTGGTGACTTCACTCGTGGCGATGG
TCAGTAATATGAGGATCTTGGTTATATGTGTACAATTTCCCCGCCAAATGCTGACTGTTCATGCGAAAAGGTACC
GGTGGAAAGTCGATCTACGGTGAGAAGTTTGCCGACGAAAACTTCAAGCTGAGGCATACGCGCAAGGGGCTCCTG
AGCATGGCCAACGCCGGCAAGGACACCAACGGCTCCCAGTTCTTCATCACCACCGTTCCTACACCGTAAGTCTAT
GCCGATTTCGTCTAGCGATAACAGCCAGCTTATGATTGCGGGACAGTTGGCTTGATGGCCGCCATGTCGTCTTCG
GTGAAGTGCTCGAGGGCTACGAGATCGTCGCTCAGATTGAGAACGTGCCCAAGGGCCGTTCTGACAGACCCGTGG
AGACTGTCAAGATCGTCAAGAGTGGAGAGTTGGAGTCTGAGGACAAGGCTGGAGAAAAAGGTAGCAGCCACGAGG
AGCTGTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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