Fungal Genomics

at Utrecht University

General Properties

Protein IDAni_SJS100_1|g4394.t1
Gene name
Locationscaffold_022:139293..140288
Strand-
Gene length (bp)995
Transcript length (bp)663
Coding sequence length (bp)663
Protein length (aa) 221

Your browser does not support drawing a protein figure.

PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF01423 LSM LSM domain 3.7E-19 9 89

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)		 D score
(significance: > 0.45)
No 1 - 44 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ani_SJS100_1|g4394.t1
MAANKQGKMQNLINYRMRVTLNDGRQMTGQMLAFDKHMNLVLADTEEFRRVKRKSKPAAGSTNAPLVEAEEKRTL
GLTIVRGTHVVSCSVDGPPPADPSARLGAAGPSAAAAAATLAAGPGISKPAGRGLPVGLGGPAAGVGGPPPPPGG
FPGFPPGGSFPGVPPPGFAGRGGAPGGPPGFAPPPGFAPQGAPPGAFQPPPGFQPPGQGRGFPPPGFGGR*
Coding >Ani_SJS100_1|g4394.t1
ATGGCGGCTAATAAGCAGGGCAAGATGCAAAACCTCATCAACTACCGGATGAGAGTCACCCTCAATGATGGCCGA
CAGATGACGGGACAGATGCTCGCTTTCGATAAGCACATGAACCTTGTCCTCGCCGATACAGAAGAATTCCGTCGC
GTCAAGCGCAAGTCCAAGCCCGCCGCCGGTTCGACCAACGCACCTCTTGTTGAGGCCGAAGAAAAGCGCACCCTG
GGCCTTACCATTGTTCGCGGTACACATGTCGTCTCTTGCTCAGTTGATGGACCTCCTCCTGCCGATCCCTCTGCC
CGACTCGGTGCTGCTGGTCCTAGCGCAGCTGCCGCTGCTGCCACTCTCGCTGCTGGCCCTGGAATTAGCAAACCC
GCTGGACGTGGTCTGCCGGTCGGTCTGGGAGGCCCTGCTGCAGGTGTTGGTGGCCCTCCCCCGCCGCCCGGCGGT
TTTCCCGGCTTCCCTCCTGGTGGTAGTTTCCCTGGAGTGCCGCCTCCGGGCTTCGCTGGTCGTGGTGGTGCCCCT
GGTGGACCTCCTGGCTTTGCTCCTCCCCCGGGATTCGCTCCCCAGGGTGCTCCTCCGGGTGCCTTCCAACCCCCA
CCGGGATTCCAGCCCCCTGGACAAGGACGCGGATTCCCTCCACCCGGCTTTGGTGGACGGTGA
Transcript >Ani_SJS100_1|g4394.t1
ATGGCGGCTAATAAGCAGGGCAAGATGCAAAACCTCATCAACTACCGGATGAGAGTCACCCTCAATGATGGCCGA
CAGATGACGGGACAGATGCTCGCTTTCGATAAGCACATGAACCTTGTCCTCGCCGATACAGAAGAATTCCGTCGC
GTCAAGCGCAAGTCCAAGCCCGCCGCCGGTTCGACCAACGCACCTCTTGTTGAGGCCGAAGAAAAGCGCACCCTG
GGCCTTACCATTGTTCGCGGTACACATGTCGTCTCTTGCTCAGTTGATGGACCTCCTCCTGCCGATCCCTCTGCC
CGACTCGGTGCTGCTGGTCCTAGCGCAGCTGCCGCTGCTGCCACTCTCGCTGCTGGCCCTGGAATTAGCAAACCC
GCTGGACGTGGTCTGCCGGTCGGTCTGGGAGGCCCTGCTGCAGGTGTTGGTGGCCCTCCCCCGCCGCCCGGCGGT
TTTCCCGGCTTCCCTCCTGGTGGTAGTTTCCCTGGAGTGCCGCCTCCGGGCTTCGCTGGTCGTGGTGGTGCCCCT
GGTGGACCTCCTGGCTTTGCTCCTCCCCCGGGATTCGCTCCCCAGGGTGCTCCTCCGGGTGCCTTCCAACCCCCA
CCGGGATTCCAGCCCCCTGGACAAGGACGCGGATTCCCTCCACCCGGCTTTGGTGGACGGTGA
Gene >Ani_SJS100_1|g4394.t1
ATGGCGGCTAATAAGCAGGGCAAGATGGTGAGTTAATCGGATCCTTCCCTTTCGTGTTCATATCAGCTTGTATAC
ACATGTTCGCGTGACTAACTCTTTATTCTTCATTTTTGAGTAGCAAAACCTCGTAAGTTACTGACGATACAAGTT
TCACTCGCGCGTCAAACCTGACAGTATCCTCAGATCAACTACCGGATGAGAGTCACCCTCAATGATGGCCGACAG
ATGACGGGACAGATGCTCGCTTTCGATAAGGTATATATATCTGGGTCTTTCAGTGGCCATCGGATAACACTTGTG
GTCGGCTGGTCGCTGATGCAGAATTATAGCACATGAACCTTGTCCTCGCCGATACAGAAGAATTCCGTCGCGTCA
AGCGCAAGTCCAAGCCCGCCGCCGGTTCGACCAACGCACCTCTTGTTGAGGCCGAAGAAAAGCGCACCCTGGGCC
TTACCATTGTTCGCGGTACACATGTCGTCTCTTGCTCAGTTGATGGACCTCCTCCTGCCGATCCCTCTGCCCGAC
TCGGTGCTGCTGGTCCTAGCGCAGCTGCCGCTGCTGCCACTCTCGCTGCTGGCCCTGGAATTAGCAAACCCGCTG
GACGTGGTCTGCCGGTCGGTCTGGGAGGCCCTGCTGCAGGTGTTGGTGGCCCTCCCCCGCCGCCCGGCGGTTTTC
CCGGCTTCCCTCCTGGTGGTAGTTTCCCTGGAGTGCCGCCTCCGGGCTTCGCTGGTCGTGGTGGTGCCCCTGGTG
GACCTCGTAAGTTTGCACTTTCGAGCTCGATGTTGAACTTGGTTACTGACTTAGGATATTAGCTGGCTTTGCTCC
TCCCCCGGGATTCGCTCCCCAGGGTGCTCCTCGTAAGTATCCTTGAATAGCGTGTTATGGTTATAGAGCTAACTG
ATGCTGTTGTAGCGGGTGCCTTCCAACCCCCACCGGGATTCCAGCCCCCTGGACAAGGACGCGGATTCCCTCCAC
CCGGCTTTGGTGGACGGTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail