Protein ID | Ani_SJS100_1|g4392.t1 |
Gene name | |
Location | scaffold_022:134888..137204 |
Strand | + |
Gene length (bp) | 2316 |
Transcript length (bp) | 2253 |
Coding sequence length (bp) | 2253 |
Protein length (aa) | 751 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF01490 | Aa_trans | Transmembrane amino acid transporter protein | 5.5E-84 | 353 | 731 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 70 | 0.45 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 355 | 377 | 22 |
2 | 381 | 403 | 22 |
3 | 428 | 450 | 22 |
4 | 465 | 484 | 19 |
5 | 491 | 512 | 21 |
6 | 532 | 554 | 22 |
7 | 567 | 589 | 22 |
8 | 613 | 635 | 22 |
9 | 656 | 673 | 17 |
10 | 683 | 702 | 19 |
11 | 715 | 737 | 22 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ani_SJS100_1|g4392.t1 MSSSRMSDNGEGSSSQRNRSSSPISTSAMRSGSPAGDVSSSYRHASIARLVSPIPSPSNSYSSRQVPLPIQPTAA TNQDLRRVDNPSSLPGPGQSMIASALQDYLGRSPPPRAGTPPRRTASPALLNQPVRSNYGSFDNKAGREGSIYSA GPYEDPEVVKRHLVQPQNVVENRDIHSSGGAQSNAEDEFSSLQLQGGDITRQVYRWAEDAEAGSSLRKPNRSRSF SHARPAPEDETTNINSIRVPGGFRRDYLRRAVGPNLPGDLDGSGAQASAAQPQLPTSSFLEFLTLYGHFAGEELE EDDEVLGPDEYFSSDTYDEAEGREPGEDSALLRPDTAGRRKRKPRGGTGTNTRTGAALLLLKSFVGTGVLFLPRA FLNGGMLFSSMVLLGVSLLSFYCFILLVNTRLKIDGSFGDIGGALYGKHMRRIILGSIVLSQLGFVSAYIVFTAE NLQAFVLAVSKCKSFIDIKFMVLLQLVIFLPLSLIRDISKLGFTALIADLFIMLGLVYLFYYDFLTISNQGGVSD IISFNPSTWTLFIGTAIFTYEGIGLIIPIQESMKHPQKFPGVLAMVMVIITVIFLSAGAFSYAAYGSATKTVVIL NMPQDDKFVNAVQFLYSLAILLSTPLQLFPAIRILENELFTRSGKYNPSIKWKKNCFRFFLVMICAFIAWGGAED LDKFVSLVGSFACVPLIYVYPPLLHLKACAQSRRQQIADIALSVFGVLSCLYTTALTLNNWINGSDVKAPGYCDS * |
Coding | >Ani_SJS100_1|g4392.t1 ATGTCATCCTCCAGGATGTCCGACAACGGTGAGGGCTCATCCTCTCAGCGTAACCGTTCATCGTCGCCGATCTCC ACGTCCGCGATGCGCTCGGGATCGCCTGCAGGAGATGTTTCTTCTTCTTATAGGCATGCTTCGATAGCCCGGCTA GTATCACCAATTCCTTCTCCCTCGAACTCCTATTCGTCAAGACAGGTACCGCTGCCGATTCAACCAACCGCGGCA ACCAACCAAGACCTTCGGAGAGTCGACAATCCATCATCCTTACCCGGCCCCGGACAATCCATGATTGCATCTGCG CTCCAGGATTACCTTGGCCGATCTCCTCCTCCGAGAGCGGGTACCCCTCCGAGGCGGACTGCTTCGCCTGCCCTC CTGAACCAGCCTGTCAGGTCGAATTACGGTTCCTTTGATAACAAGGCTGGGAGAGAGGGTTCAATATACTCAGCA GGTCCATACGAGGATCCCGAAGTTGTCAAGAGGCATTTGGTGCAACCCCAGAATGTGGTCGAGAATCGGGATATC CACTCGTCTGGCGGCGCCCAAAGTAACGCCGAGGATGAGTTCTCTAGTCTGCAACTCCAGGGTGGTGATATCACG AGACAGGTATACAGATGGGCTGAGGATGCAGAAGCTGGAAGCTCTTTGCGGAAACCGAACCGGAGCAGGAGCTTC AGTCATGCTCGACCTGCACCTGAGGATGAAACAACGAACATCAACAGTATCCGTGTCCCAGGAGGTTTCAGAAGG GACTATCTAAGACGGGCAGTAGGCCCTAACCTTCCTGGAGATCTGGATGGCTCGGGTGCGCAGGCTTCTGCTGCT CAGCCACAGCTTCCAACAAGCAGCTTTTTGGAATTCCTGACTCTATACGGTCACTTTGCTGGTGAAGAGCTCGAA GAGGATGACGAGGTCCTGGGCCCCGATGAGTATTTCTCATCGGATACTTATGACGAAGCAGAAGGCAGAGAACCA GGTGAAGATTCAGCTCTCCTCAGGCCAGACACAGCTGGCCGGAGGAAGCGCAAGCCACGCGGTGGGACGGGAACC AACACGAGGACCGGAGCAGCATTACTTCTACTCAAGTCTTTCGTTGGCACAGGAGTTTTGTTCTTGCCAAGAGCT TTCTTGAATGGTGGCATGCTGTTCAGTAGTATGGTACTTCTTGGCGTATCACTACTCAGCTTTTACTGCTTCATC CTTCTGGTTAATACGCGGCTGAAGATTGATGGTTCCTTTGGTGACATTGGTGGTGCGCTCTATGGAAAGCATATG AGGCGCATCATCCTTGGATCCATTGTGTTGAGTCAATTGGGTTTCGTGTCGGCATATATTGTTTTCACGGCCGAG AATCTACAAGCCTTCGTTCTGGCTGTCAGCAAATGCAAATCTTTCATTGACATCAAGTTCATGGTGTTGCTGCAG CTGGTCATCTTCCTCCCTCTCTCATTGATCCGCGATATCAGCAAGCTCGGGTTCACTGCTCTCATTGCAGATCTG TTTATCATGCTGGGGCTGGTTTACCTCTTCTATTATGATTTCTTGACTATCTCGAACCAAGGAGGTGTGTCGGAT ATCATCTCCTTCAACCCATCCACCTGGACACTTTTCATCGGCACGGCTATTTTCACGTATGAGGGAATTGGTTTG ATCATCCCAATCCAGGAATCAATGAAGCACCCGCAAAAGTTTCCCGGTGTTCTGGCAATGGTGATGGTCATAATC ACGGTCATCTTCCTCAGCGCTGGTGCATTCAGCTATGCGGCATATGGATCCGCAACGAAGACGGTAGTCATCCTC AACATGCCTCAGGATGACAAGTTTGTAAATGCCGTGCAGTTCTTGTACTCTCTGGCGATTCTTCTCAGTACCCCA CTGCAGCTTTTCCCGGCCATTCGAATTTTGGAGAATGAGCTTTTCACTCGCAGCGGAAAGTACAATCCCAGTATC AAATGGAAGAAGAATTGCTTCCGTTTCTTCCTTGTCATGATCTGTGCATTCATTGCCTGGGGCGGAGCAGAAGAC TTGGACAAGTTTGTTTCGCTTGTCGGAAGTTTCGCCTGTGTCCCCTTGATTTATGTATATCCGCCTTTGCTGCAT CTTAAGGCCTGTGCCCAATCGAGACGACAGCAGATTGCCGATATCGCACTCTCCGTTTTCGGTGTCCTTAGCTGT TTGTATACGACCGCCCTGACACTCAACAACTGGATCAATGGGTCGGACGTCAAAGCTCCCGGGTACTGTGACTCA TAG |
Transcript | >Ani_SJS100_1|g4392.t1 ATGTCATCCTCCAGGATGTCCGACAACGGTGAGGGCTCATCCTCTCAGCGTAACCGTTCATCGTCGCCGATCTCC ACGTCCGCGATGCGCTCGGGATCGCCTGCAGGAGATGTTTCTTCTTCTTATAGGCATGCTTCGATAGCCCGGCTA GTATCACCAATTCCTTCTCCCTCGAACTCCTATTCGTCAAGACAGGTACCGCTGCCGATTCAACCAACCGCGGCA ACCAACCAAGACCTTCGGAGAGTCGACAATCCATCATCCTTACCCGGCCCCGGACAATCCATGATTGCATCTGCG CTCCAGGATTACCTTGGCCGATCTCCTCCTCCGAGAGCGGGTACCCCTCCGAGGCGGACTGCTTCGCCTGCCCTC CTGAACCAGCCTGTCAGGTCGAATTACGGTTCCTTTGATAACAAGGCTGGGAGAGAGGGTTCAATATACTCAGCA GGTCCATACGAGGATCCCGAAGTTGTCAAGAGGCATTTGGTGCAACCCCAGAATGTGGTCGAGAATCGGGATATC CACTCGTCTGGCGGCGCCCAAAGTAACGCCGAGGATGAGTTCTCTAGTCTGCAACTCCAGGGTGGTGATATCACG AGACAGGTATACAGATGGGCTGAGGATGCAGAAGCTGGAAGCTCTTTGCGGAAACCGAACCGGAGCAGGAGCTTC AGTCATGCTCGACCTGCACCTGAGGATGAAACAACGAACATCAACAGTATCCGTGTCCCAGGAGGTTTCAGAAGG GACTATCTAAGACGGGCAGTAGGCCCTAACCTTCCTGGAGATCTGGATGGCTCGGGTGCGCAGGCTTCTGCTGCT CAGCCACAGCTTCCAACAAGCAGCTTTTTGGAATTCCTGACTCTATACGGTCACTTTGCTGGTGAAGAGCTCGAA GAGGATGACGAGGTCCTGGGCCCCGATGAGTATTTCTCATCGGATACTTATGACGAAGCAGAAGGCAGAGAACCA GGTGAAGATTCAGCTCTCCTCAGGCCAGACACAGCTGGCCGGAGGAAGCGCAAGCCACGCGGTGGGACGGGAACC AACACGAGGACCGGAGCAGCATTACTTCTACTCAAGTCTTTCGTTGGCACAGGAGTTTTGTTCTTGCCAAGAGCT TTCTTGAATGGTGGCATGCTGTTCAGTAGTATGGTACTTCTTGGCGTATCACTACTCAGCTTTTACTGCTTCATC CTTCTGGTTAATACGCGGCTGAAGATTGATGGTTCCTTTGGTGACATTGGTGGTGCGCTCTATGGAAAGCATATG AGGCGCATCATCCTTGGATCCATTGTGTTGAGTCAATTGGGTTTCGTGTCGGCATATATTGTTTTCACGGCCGAG AATCTACAAGCCTTCGTTCTGGCTGTCAGCAAATGCAAATCTTTCATTGACATCAAGTTCATGGTGTTGCTGCAG CTGGTCATCTTCCTCCCTCTCTCATTGATCCGCGATATCAGCAAGCTCGGGTTCACTGCTCTCATTGCAGATCTG TTTATCATGCTGGGGCTGGTTTACCTCTTCTATTATGATTTCTTGACTATCTCGAACCAAGGAGGTGTGTCGGAT ATCATCTCCTTCAACCCATCCACCTGGACACTTTTCATCGGCACGGCTATTTTCACGTATGAGGGAATTGGTTTG ATCATCCCAATCCAGGAATCAATGAAGCACCCGCAAAAGTTTCCCGGTGTTCTGGCAATGGTGATGGTCATAATC ACGGTCATCTTCCTCAGCGCTGGTGCATTCAGCTATGCGGCATATGGATCCGCAACGAAGACGGTAGTCATCCTC AACATGCCTCAGGATGACAAGTTTGTAAATGCCGTGCAGTTCTTGTACTCTCTGGCGATTCTTCTCAGTACCCCA CTGCAGCTTTTCCCGGCCATTCGAATTTTGGAGAATGAGCTTTTCACTCGCAGCGGAAAGTACAATCCCAGTATC AAATGGAAGAAGAATTGCTTCCGTTTCTTCCTTGTCATGATCTGTGCATTCATTGCCTGGGGCGGAGCAGAAGAC TTGGACAAGTTTGTTTCGCTTGTCGGAAGTTTCGCCTGTGTCCCCTTGATTTATGTATATCCGCCTTTGCTGCAT CTTAAGGCCTGTGCCCAATCGAGACGACAGCAGATTGCCGATATCGCACTCTCCGTTTTCGGTGTCCTTAGCTGT TTGTATACGACCGCCCTGACACTCAACAACTGGATCAATGGGTCGGACGTCAAAGCTCCCGGGTACTGTGACTCA TAG |
Gene | >Ani_SJS100_1|g4392.t1 ATGTCATCCTCCAGGATGTCCGACAACGGTGAGGGCTCATCCTCTCAGCGTAACCGTTCATCGTCGCCGATCTCC ACGTCCGCGATGCGCTCGGGATCGCCTGCAGGAGATGTTTCTTCTTCTTATAGGCATGCTTCGATAGCCCGGCTA GTATCACCAATTCCTTCTCCCTCGAACTCCTATTCGTCAAGACAGGTACCGCTGCCGATTCAACCAACCGCGGCA ACCAACCAAGACCTTCGGAGAGTCGACAATCCATCATCCTTACCCGGCCCCGGACAATCCATGATTGCATCTGCG CTCCAGGATTACCTTGGCCGATCTCCTCCTCCGAGAGCGGGTACCCCTCCGAGGCGGACTGCTTCGCCTGCCCTC CTGAACCAGCCTGTCAGGTCGAATTACGGTTCCTTTGATAACAAGGCTGGGAGAGAGGGTTCAATATACTCAGCA GGTCCATACGAGGATCCCGAAGTTGTCAAGAGGCATTTGGTGCAACCCCAGAATGTGGTCGAGAATCGGGATATC CACTCGTCTGGCGGCGCCCAAAGTAACGCCGAGGATGAGTTCTCTAGTCTGCAACTCCAGGGTGGTGATATCACG AGACAGGTATACAGATGGGCTGAGGATGCAGAAGCTGGAAGCTCTTTGCGGAAACCGAACCGGAGCAGGAGCTTC AGTCATGCTCGACCTGCACCTGAGGATGAAACAACGAACATCAACAGTATCCGTGTCCCAGGAGGTTTCAGAAGG GACTATCTAAGACGGGCAGTAGGCCCTAACCTTCCTGGAGATCTGGATGGCTCGGGTGCGCAGGCTTCTGCTGCT CAGCCACAGCTTCCAACAAGCAGCTTTTTGGAATTCCTGACTCTATACGGTCACTTTGCTGGTGAAGAGCTCGAA GAGGATGACGAGGTCCTGGGCCCCGATGAGTATTTCTCATCGGATACTTATGACGAAGCAGAAGGCAGAGAACCA GGTGAAGATTCAGCTCTCCTCAGGCCAGACACAGCTGGCCGGAGGAAGCGCAAGCCACGCGGTGGGACGGGAACC AACACGAGGACCGGAGCAGCATTACTTCTACTCAAGTCTTTCGTTGGCACAGGAGTTTTGTTCTTGCCAAGAGCT TTCTTGAATGGTGGCATGCTGTTCAGTAGTATGGTACTTCTTGGCGTATCACTACTCAGCTTTTACTGCTTCATC CTTCTGGTTAATACGCGGCTGAAGATTGATGGTTCCTTTGGTGACATTGGTGGTGCGCTCTATGGAAAGCATATG AGGCGCATCATCCTTGGATCCATTGTGTTGAGTCAATTGGGTTTCGTGTCGGCATATATTGTTTTCACGGCCGAG AATCTACAAGCCTTCGTTCTGGCTGTCAGCAAATGCAAATCTTTCATTGACATCAAGTTCATGGTGTTGCTGCAG CTGGTCATCTTCCTCCCTCTCTCATTGATCCGCGATATCAGCAAGCTCGGGTTCACTGCTCTCATTGCAGATCTG TTTATCATGCTGGGGCTGGTTTACCTCTTCTATTATGATTTCTTGACTATCTCGAACCAAGGAGGTGTGTCGGAT ATCATCTCCTTCAACCCATCCACCTGGACACTTTTCATCGGCACGGCTATTTTCACGTATGAGGGAATTGGTTTG ATCATCCCAATCCAGGAATCAATGAAGCACCCGCAAAAGTTTCCCGGTGTTCTGGCAATGGTGATGGTCATAATC ACGGTCATCTTCCTCAGCGCTGGTGCATTCAGCTATGCGGCATATGGATCCGCAACGAAGACGGTAGTCATCCTC AACATGCCTCAGGATGACAAGTTTGTAAATGCCGTGCAGTTCTTGTACTCTCTGGCGATTCTTCTCAGTACCCCA CTGCAGCTTTTCCCGGCCATTCGAATTTTGGAGAATGAGCTTTTCACTCGCAGCGGAAAGTACAATCCCAGTATC AAATGGAAGAAGAATTGCTTCCGTTTCTTCCTTGTCATGATCTGTGCATTCATTGCCTGGGGCGGAGCAGAAGAC TTGGACAAGTTTGTTTCGCTTGTCGGAAGTTTCGCCTGTGTCCCCTTGATTTATGTATATCCGGTGAGTTAACCT GTTAAGTACCTTCAATTCGGTCCGCCAAATTGGTTACTAACTTGTGCTTAGCCTTTGCTGCATCTTAAGGCCTGT GCCCAATCGAGACGACAGCAGATTGCCGATATCGCACTCTCCGTTTTCGGTGTCCTTAGCTGTTTGTATACGACC GCCCTGACACTCAACAACTGGATCAATGGGTCGGACGTCAAAGCTCCCGGGTACTGTGACTCATAG |