Fungal Genomics

at Utrecht University

General Properties

Protein IDAni_SJS100_1|g437.t1
Gene name
Locationscaffold_001:1435738..1437232
Strand-
Gene length (bp)1494
Transcript length (bp)1494
Coding sequence length (bp)1494
Protein length (aa) 498

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF12937 F-box-like F-box-like 1.7E-05 2 45

GO

GO Term Description Terminal node
GO:0005515 protein binding Yes
GO:0005488 binding No
GO:0003674 molecular_function No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 12 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ani_SJS100_1|g437.t1
MDRLPLELHIRIGRHLHTQDLYQLVLVSKSYHSTFTPELYREIMISGEYQESNTNSYWPSVPVTRKSRPPGRCLP
YALSEHPVLAGFVRSLVLLPLAHQGSPQLKPSRALQETDWLDSLLPHPVTRRTILCWQKALDSDEKLDSRQPLRN
PWFALLLLQLKNLRRLSVYLPCEERVSGLNYTSATPYFDSVIHGAAKPGSGILPRLTHLTINEAHLRWHHKRSGI
PLSQLAPFLRIPSLRYIRVGQLTENNKQALPRDFSCGITHIDIEECDKTITQLPRLLSGCSKLESFTWALEESTH
HFYNDPHSPAYHWNPNRVYAPLYEARSTLRHLTMISYECSGNMFLFHDLEYPQPAYFGPLCDFPVLETLNMPMVN
LMPFHPGTHVPVSPLWETLPSSLKSLSIYGCLLQSSHMLCDELEDLAAHCQTHFPLLNMVYIVYSSFEKINGQQC
RACRGELSPKYDMVKRDPVIDGRLEALKVRFKMLGVILAVNESMNWF*
Coding >Ani_SJS100_1|g437.t1
ATGGATCGATTGCCCCTCGAACTGCATATACGAATCGGCCGACATCTGCACACCCAAGATTTATACCAGCTGGTT
CTCGTCTCAAAATCCTATCATTCCACTTTCACCCCGGAGCTTTACCGCGAGATCATGATTTCGGGAGAATACCAG
GAGTCTAACACCAATTCCTACTGGCCATCTGTCCCGGTAACGCGCAAGAGCCGCCCTCCTGGCCGATGTCTCCCT
TATGCCCTTAGTGAACACCCAGTCCTTGCTGGTTTCGTCCGCTCACTGGTGTTGCTCCCACTCGCACACCAGGGT
TCTCCACAACTCAAACCGTCACGAGCTCTTCAGGAAACAGATTGGCTAGACTCCTTGCTCCCCCATCCGGTGACC
AGACGGACAATCCTGTGTTGGCAAAAGGCCCTTGATTCTGACGAGAAACTCGATTCTCGCCAGCCCCTGAGAAAT
CCCTGGTTCGCCCTGCTATTGCTTCAGCTCAAGAATCTACGGCGTCTTTCTGTTTATTTGCCATGCGAGGAACGC
GTGTCTGGACTAAACTACACCTCTGCGACGCCTTATTTTGACAGCGTCATCCATGGGGCAGCAAAACCCGGATCA
GGGATCCTCCCCCGCTTGACCCATCTCACTATCAACGAAGCTCACTTACGGTGGCATCATAAGCGGTCAGGTATA
CCCCTGAGTCAGCTGGCACCATTTCTTCGGATCCCTTCCCTGAGATATATACGTGTTGGGCAGCTCACTGAGAAT
AATAAGCAAGCTCTCCCTCGCGACTTCAGCTGCGGAATAACCCATATTGATATCGAAGAGTGTGATAAAACCATC
ACTCAATTGCCACGCCTCCTCTCGGGGTGTTCAAAGCTCGAATCCTTCACATGGGCGCTCGAGGAGTCAACACAT
CATTTCTATAATGACCCGCACAGTCCTGCTTACCACTGGAATCCCAACCGCGTGTATGCTCCTCTTTACGAAGCC
CGCTCCACGCTGCGGCACCTTACTATGATATCTTATGAGTGCAGTGGCAACATGTTCCTCTTTCACGATCTGGAG
TATCCCCAGCCAGCATACTTCGGGCCCCTGTGTGACTTTCCTGTCCTGGAAACCCTAAACATGCCGATGGTTAAT
CTAATGCCTTTTCATCCCGGCACACATGTCCCGGTTTCTCCTCTGTGGGAGACTCTCCCAAGCTCGCTCAAGTCC
CTATCCATATACGGGTGTCTTTTGCAGAGTTCGCATATGCTCTGCGACGAGCTGGAAGACTTGGCAGCACATTGC
CAGACACATTTCCCTCTGCTTAATATGGTGTACATCGTGTATTCCAGTTTTGAGAAGATCAATGGGCAGCAATGT
AGGGCCTGTCGCGGCGAACTTTCTCCTAAGTACGATATGGTCAAGCGAGACCCAGTGATCGATGGGCGGCTTGAA
GCTTTGAAAGTCAGGTTTAAAATGCTCGGGGTCATTTTGGCCGTCAATGAATCCATGAACTGGTTCTGA
Transcript >Ani_SJS100_1|g437.t1
ATGGATCGATTGCCCCTCGAACTGCATATACGAATCGGCCGACATCTGCACACCCAAGATTTATACCAGCTGGTT
CTCGTCTCAAAATCCTATCATTCCACTTTCACCCCGGAGCTTTACCGCGAGATCATGATTTCGGGAGAATACCAG
GAGTCTAACACCAATTCCTACTGGCCATCTGTCCCGGTAACGCGCAAGAGCCGCCCTCCTGGCCGATGTCTCCCT
TATGCCCTTAGTGAACACCCAGTCCTTGCTGGTTTCGTCCGCTCACTGGTGTTGCTCCCACTCGCACACCAGGGT
TCTCCACAACTCAAACCGTCACGAGCTCTTCAGGAAACAGATTGGCTAGACTCCTTGCTCCCCCATCCGGTGACC
AGACGGACAATCCTGTGTTGGCAAAAGGCCCTTGATTCTGACGAGAAACTCGATTCTCGCCAGCCCCTGAGAAAT
CCCTGGTTCGCCCTGCTATTGCTTCAGCTCAAGAATCTACGGCGTCTTTCTGTTTATTTGCCATGCGAGGAACGC
GTGTCTGGACTAAACTACACCTCTGCGACGCCTTATTTTGACAGCGTCATCCATGGGGCAGCAAAACCCGGATCA
GGGATCCTCCCCCGCTTGACCCATCTCACTATCAACGAAGCTCACTTACGGTGGCATCATAAGCGGTCAGGTATA
CCCCTGAGTCAGCTGGCACCATTTCTTCGGATCCCTTCCCTGAGATATATACGTGTTGGGCAGCTCACTGAGAAT
AATAAGCAAGCTCTCCCTCGCGACTTCAGCTGCGGAATAACCCATATTGATATCGAAGAGTGTGATAAAACCATC
ACTCAATTGCCACGCCTCCTCTCGGGGTGTTCAAAGCTCGAATCCTTCACATGGGCGCTCGAGGAGTCAACACAT
CATTTCTATAATGACCCGCACAGTCCTGCTTACCACTGGAATCCCAACCGCGTGTATGCTCCTCTTTACGAAGCC
CGCTCCACGCTGCGGCACCTTACTATGATATCTTATGAGTGCAGTGGCAACATGTTCCTCTTTCACGATCTGGAG
TATCCCCAGCCAGCATACTTCGGGCCCCTGTGTGACTTTCCTGTCCTGGAAACCCTAAACATGCCGATGGTTAAT
CTAATGCCTTTTCATCCCGGCACACATGTCCCGGTTTCTCCTCTGTGGGAGACTCTCCCAAGCTCGCTCAAGTCC
CTATCCATATACGGGTGTCTTTTGCAGAGTTCGCATATGCTCTGCGACGAGCTGGAAGACTTGGCAGCACATTGC
CAGACACATTTCCCTCTGCTTAATATGGTGTACATCGTGTATTCCAGTTTTGAGAAGATCAATGGGCAGCAATGT
AGGGCCTGTCGCGGCGAACTTTCTCCTAAGTACGATATGGTCAAGCGAGACCCAGTGATCGATGGGCGGCTTGAA
GCTTTGAAAGTCAGGTTTAAAATGCTCGGGGTCATTTTGGCCGTCAATGAATCCATGAACTGGTTCTGA
Gene >Ani_SJS100_1|g437.t1
ATGGATCGATTGCCCCTCGAACTGCATATACGAATCGGCCGACATCTGCACACCCAAGATTTATACCAGCTGGTT
CTCGTCTCAAAATCCTATCATTCCACTTTCACCCCGGAGCTTTACCGCGAGATCATGATTTCGGGAGAATACCAG
GAGTCTAACACCAATTCCTACTGGCCATCTGTCCCGGTAACGCGCAAGAGCCGCCCTCCTGGCCGATGTCTCCCT
TATGCCCTTAGTGAACACCCAGTCCTTGCTGGTTTCGTCCGCTCACTGGTGTTGCTCCCACTCGCACACCAGGGT
TCTCCACAACTCAAACCGTCACGAGCTCTTCAGGAAACAGATTGGCTAGACTCCTTGCTCCCCCATCCGGTGACC
AGACGGACAATCCTGTGTTGGCAAAAGGCCCTTGATTCTGACGAGAAACTCGATTCTCGCCAGCCCCTGAGAAAT
CCCTGGTTCGCCCTGCTATTGCTTCAGCTCAAGAATCTACGGCGTCTTTCTGTTTATTTGCCATGCGAGGAACGC
GTGTCTGGACTAAACTACACCTCTGCGACGCCTTATTTTGACAGCGTCATCCATGGGGCAGCAAAACCCGGATCA
GGGATCCTCCCCCGCTTGACCCATCTCACTATCAACGAAGCTCACTTACGGTGGCATCATAAGCGGTCAGGTATA
CCCCTGAGTCAGCTGGCACCATTTCTTCGGATCCCTTCCCTGAGATATATACGTGTTGGGCAGCTCACTGAGAAT
AATAAGCAAGCTCTCCCTCGCGACTTCAGCTGCGGAATAACCCATATTGATATCGAAGAGTGTGATAAAACCATC
ACTCAATTGCCACGCCTCCTCTCGGGGTGTTCAAAGCTCGAATCCTTCACATGGGCGCTCGAGGAGTCAACACAT
CATTTCTATAATGACCCGCACAGTCCTGCTTACCACTGGAATCCCAACCGCGTGTATGCTCCTCTTTACGAAGCC
CGCTCCACGCTGCGGCACCTTACTATGATATCTTATGAGTGCAGTGGCAACATGTTCCTCTTTCACGATCTGGAG
TATCCCCAGCCAGCATACTTCGGGCCCCTGTGTGACTTTCCTGTCCTGGAAACCCTAAACATGCCGATGGTTAAT
CTAATGCCTTTTCATCCCGGCACACATGTCCCGGTTTCTCCTCTGTGGGAGACTCTCCCAAGCTCGCTCAAGTCC
CTATCCATATACGGGTGTCTTTTGCAGAGTTCGCATATGCTCTGCGACGAGCTGGAAGACTTGGCAGCACATTGC
CAGACACATTTCCCTCTGCTTAATATGGTGTACATCGTGTATTCCAGTTTTGAGAAGATCAATGGGCAGCAATGT
AGGGCCTGTCGCGGCGAACTTTCTCCTAAGTACGATATGGTCAAGCGAGACCCAGTGATCGATGGGCGGCTTGAA
GCTTTGAAAGTCAGGTTTAAAATGCTCGGGGTCATTTTGGCCGTCAATGAATCCATGAACTGGTTCTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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