Protein ID | Ani_SJS100_1|g437.t1 |
Gene name | |
Location | scaffold_001:1435738..1437232 |
Strand | - |
Gene length (bp) | 1494 |
Transcript length (bp) | 1494 |
Coding sequence length (bp) | 1494 |
Protein length (aa) | 498 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF12937 | F-box-like | F-box-like | 1.7E-05 | 2 | 45 |
GO Term | Description | Terminal node |
---|---|---|
GO:0005515 | protein binding | Yes |
GO:0005488 | binding | No |
GO:0003674 | molecular_function | No |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 12 | 0.45 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ani_SJS100_1|g437.t1 MDRLPLELHIRIGRHLHTQDLYQLVLVSKSYHSTFTPELYREIMISGEYQESNTNSYWPSVPVTRKSRPPGRCLP YALSEHPVLAGFVRSLVLLPLAHQGSPQLKPSRALQETDWLDSLLPHPVTRRTILCWQKALDSDEKLDSRQPLRN PWFALLLLQLKNLRRLSVYLPCEERVSGLNYTSATPYFDSVIHGAAKPGSGILPRLTHLTINEAHLRWHHKRSGI PLSQLAPFLRIPSLRYIRVGQLTENNKQALPRDFSCGITHIDIEECDKTITQLPRLLSGCSKLESFTWALEESTH HFYNDPHSPAYHWNPNRVYAPLYEARSTLRHLTMISYECSGNMFLFHDLEYPQPAYFGPLCDFPVLETLNMPMVN LMPFHPGTHVPVSPLWETLPSSLKSLSIYGCLLQSSHMLCDELEDLAAHCQTHFPLLNMVYIVYSSFEKINGQQC RACRGELSPKYDMVKRDPVIDGRLEALKVRFKMLGVILAVNESMNWF* |
Coding | >Ani_SJS100_1|g437.t1 ATGGATCGATTGCCCCTCGAACTGCATATACGAATCGGCCGACATCTGCACACCCAAGATTTATACCAGCTGGTT CTCGTCTCAAAATCCTATCATTCCACTTTCACCCCGGAGCTTTACCGCGAGATCATGATTTCGGGAGAATACCAG GAGTCTAACACCAATTCCTACTGGCCATCTGTCCCGGTAACGCGCAAGAGCCGCCCTCCTGGCCGATGTCTCCCT TATGCCCTTAGTGAACACCCAGTCCTTGCTGGTTTCGTCCGCTCACTGGTGTTGCTCCCACTCGCACACCAGGGT TCTCCACAACTCAAACCGTCACGAGCTCTTCAGGAAACAGATTGGCTAGACTCCTTGCTCCCCCATCCGGTGACC AGACGGACAATCCTGTGTTGGCAAAAGGCCCTTGATTCTGACGAGAAACTCGATTCTCGCCAGCCCCTGAGAAAT CCCTGGTTCGCCCTGCTATTGCTTCAGCTCAAGAATCTACGGCGTCTTTCTGTTTATTTGCCATGCGAGGAACGC GTGTCTGGACTAAACTACACCTCTGCGACGCCTTATTTTGACAGCGTCATCCATGGGGCAGCAAAACCCGGATCA GGGATCCTCCCCCGCTTGACCCATCTCACTATCAACGAAGCTCACTTACGGTGGCATCATAAGCGGTCAGGTATA CCCCTGAGTCAGCTGGCACCATTTCTTCGGATCCCTTCCCTGAGATATATACGTGTTGGGCAGCTCACTGAGAAT AATAAGCAAGCTCTCCCTCGCGACTTCAGCTGCGGAATAACCCATATTGATATCGAAGAGTGTGATAAAACCATC ACTCAATTGCCACGCCTCCTCTCGGGGTGTTCAAAGCTCGAATCCTTCACATGGGCGCTCGAGGAGTCAACACAT CATTTCTATAATGACCCGCACAGTCCTGCTTACCACTGGAATCCCAACCGCGTGTATGCTCCTCTTTACGAAGCC CGCTCCACGCTGCGGCACCTTACTATGATATCTTATGAGTGCAGTGGCAACATGTTCCTCTTTCACGATCTGGAG TATCCCCAGCCAGCATACTTCGGGCCCCTGTGTGACTTTCCTGTCCTGGAAACCCTAAACATGCCGATGGTTAAT CTAATGCCTTTTCATCCCGGCACACATGTCCCGGTTTCTCCTCTGTGGGAGACTCTCCCAAGCTCGCTCAAGTCC CTATCCATATACGGGTGTCTTTTGCAGAGTTCGCATATGCTCTGCGACGAGCTGGAAGACTTGGCAGCACATTGC CAGACACATTTCCCTCTGCTTAATATGGTGTACATCGTGTATTCCAGTTTTGAGAAGATCAATGGGCAGCAATGT AGGGCCTGTCGCGGCGAACTTTCTCCTAAGTACGATATGGTCAAGCGAGACCCAGTGATCGATGGGCGGCTTGAA GCTTTGAAAGTCAGGTTTAAAATGCTCGGGGTCATTTTGGCCGTCAATGAATCCATGAACTGGTTCTGA |
Transcript | >Ani_SJS100_1|g437.t1 ATGGATCGATTGCCCCTCGAACTGCATATACGAATCGGCCGACATCTGCACACCCAAGATTTATACCAGCTGGTT CTCGTCTCAAAATCCTATCATTCCACTTTCACCCCGGAGCTTTACCGCGAGATCATGATTTCGGGAGAATACCAG GAGTCTAACACCAATTCCTACTGGCCATCTGTCCCGGTAACGCGCAAGAGCCGCCCTCCTGGCCGATGTCTCCCT TATGCCCTTAGTGAACACCCAGTCCTTGCTGGTTTCGTCCGCTCACTGGTGTTGCTCCCACTCGCACACCAGGGT TCTCCACAACTCAAACCGTCACGAGCTCTTCAGGAAACAGATTGGCTAGACTCCTTGCTCCCCCATCCGGTGACC AGACGGACAATCCTGTGTTGGCAAAAGGCCCTTGATTCTGACGAGAAACTCGATTCTCGCCAGCCCCTGAGAAAT CCCTGGTTCGCCCTGCTATTGCTTCAGCTCAAGAATCTACGGCGTCTTTCTGTTTATTTGCCATGCGAGGAACGC GTGTCTGGACTAAACTACACCTCTGCGACGCCTTATTTTGACAGCGTCATCCATGGGGCAGCAAAACCCGGATCA GGGATCCTCCCCCGCTTGACCCATCTCACTATCAACGAAGCTCACTTACGGTGGCATCATAAGCGGTCAGGTATA CCCCTGAGTCAGCTGGCACCATTTCTTCGGATCCCTTCCCTGAGATATATACGTGTTGGGCAGCTCACTGAGAAT AATAAGCAAGCTCTCCCTCGCGACTTCAGCTGCGGAATAACCCATATTGATATCGAAGAGTGTGATAAAACCATC ACTCAATTGCCACGCCTCCTCTCGGGGTGTTCAAAGCTCGAATCCTTCACATGGGCGCTCGAGGAGTCAACACAT CATTTCTATAATGACCCGCACAGTCCTGCTTACCACTGGAATCCCAACCGCGTGTATGCTCCTCTTTACGAAGCC CGCTCCACGCTGCGGCACCTTACTATGATATCTTATGAGTGCAGTGGCAACATGTTCCTCTTTCACGATCTGGAG TATCCCCAGCCAGCATACTTCGGGCCCCTGTGTGACTTTCCTGTCCTGGAAACCCTAAACATGCCGATGGTTAAT CTAATGCCTTTTCATCCCGGCACACATGTCCCGGTTTCTCCTCTGTGGGAGACTCTCCCAAGCTCGCTCAAGTCC CTATCCATATACGGGTGTCTTTTGCAGAGTTCGCATATGCTCTGCGACGAGCTGGAAGACTTGGCAGCACATTGC CAGACACATTTCCCTCTGCTTAATATGGTGTACATCGTGTATTCCAGTTTTGAGAAGATCAATGGGCAGCAATGT AGGGCCTGTCGCGGCGAACTTTCTCCTAAGTACGATATGGTCAAGCGAGACCCAGTGATCGATGGGCGGCTTGAA GCTTTGAAAGTCAGGTTTAAAATGCTCGGGGTCATTTTGGCCGTCAATGAATCCATGAACTGGTTCTGA |
Gene | >Ani_SJS100_1|g437.t1 ATGGATCGATTGCCCCTCGAACTGCATATACGAATCGGCCGACATCTGCACACCCAAGATTTATACCAGCTGGTT CTCGTCTCAAAATCCTATCATTCCACTTTCACCCCGGAGCTTTACCGCGAGATCATGATTTCGGGAGAATACCAG GAGTCTAACACCAATTCCTACTGGCCATCTGTCCCGGTAACGCGCAAGAGCCGCCCTCCTGGCCGATGTCTCCCT TATGCCCTTAGTGAACACCCAGTCCTTGCTGGTTTCGTCCGCTCACTGGTGTTGCTCCCACTCGCACACCAGGGT TCTCCACAACTCAAACCGTCACGAGCTCTTCAGGAAACAGATTGGCTAGACTCCTTGCTCCCCCATCCGGTGACC AGACGGACAATCCTGTGTTGGCAAAAGGCCCTTGATTCTGACGAGAAACTCGATTCTCGCCAGCCCCTGAGAAAT CCCTGGTTCGCCCTGCTATTGCTTCAGCTCAAGAATCTACGGCGTCTTTCTGTTTATTTGCCATGCGAGGAACGC GTGTCTGGACTAAACTACACCTCTGCGACGCCTTATTTTGACAGCGTCATCCATGGGGCAGCAAAACCCGGATCA GGGATCCTCCCCCGCTTGACCCATCTCACTATCAACGAAGCTCACTTACGGTGGCATCATAAGCGGTCAGGTATA CCCCTGAGTCAGCTGGCACCATTTCTTCGGATCCCTTCCCTGAGATATATACGTGTTGGGCAGCTCACTGAGAAT AATAAGCAAGCTCTCCCTCGCGACTTCAGCTGCGGAATAACCCATATTGATATCGAAGAGTGTGATAAAACCATC ACTCAATTGCCACGCCTCCTCTCGGGGTGTTCAAAGCTCGAATCCTTCACATGGGCGCTCGAGGAGTCAACACAT CATTTCTATAATGACCCGCACAGTCCTGCTTACCACTGGAATCCCAACCGCGTGTATGCTCCTCTTTACGAAGCC CGCTCCACGCTGCGGCACCTTACTATGATATCTTATGAGTGCAGTGGCAACATGTTCCTCTTTCACGATCTGGAG TATCCCCAGCCAGCATACTTCGGGCCCCTGTGTGACTTTCCTGTCCTGGAAACCCTAAACATGCCGATGGTTAAT CTAATGCCTTTTCATCCCGGCACACATGTCCCGGTTTCTCCTCTGTGGGAGACTCTCCCAAGCTCGCTCAAGTCC CTATCCATATACGGGTGTCTTTTGCAGAGTTCGCATATGCTCTGCGACGAGCTGGAAGACTTGGCAGCACATTGC CAGACACATTTCCCTCTGCTTAATATGGTGTACATCGTGTATTCCAGTTTTGAGAAGATCAATGGGCAGCAATGT AGGGCCTGTCGCGGCGAACTTTCTCCTAAGTACGATATGGTCAAGCGAGACCCAGTGATCGATGGGCGGCTTGAA GCTTTGAAAGTCAGGTTTAAAATGCTCGGGGTCATTTTGGCCGTCAATGAATCCATGAACTGGTTCTGA |