Protein ID | Ani_SJS100_1|g4303.t1 |
Gene name | |
Location | scaffold_021:303322..304944 |
Strand | + |
Gene length (bp) | 1622 |
Transcript length (bp) | 1413 |
Coding sequence length (bp) | 1413 |
Protein length (aa) | 471 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF01490 | Aa_trans | Transmembrane amino acid transporter protein | 4.2E-35 | 50 | 449 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 63 | 0.45 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 60 | 82 | 22 |
2 | 115 | 137 | 22 |
3 | 142 | 164 | 22 |
4 | 168 | 185 | 17 |
5 | 192 | 214 | 22 |
6 | 244 | 263 | 19 |
7 | 283 | 305 | 22 |
8 | 320 | 342 | 22 |
9 | 355 | 377 | 22 |
10 | 387 | 409 | 22 |
11 | 431 | 453 | 22 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ani_SJS100_1|g4303.t1 MLKSKEISNGPEIDHMPPQVGEVFDAEKHVHDDDAVFGDVGNNGPNYRNIGLGVLGIPSVLSSVGLIPGIILLLV IGGIATWSDYIVGAFKIRHRHVYSIDDVGGMLFGPIGREIFAVALCLFFTFISGSAMLSISIAFNALSNHAICTA IFVVIAALVTFVFASIRTLGRISPLAWVGAASIIISGRSSTSGILLMALTVGTAFIVTIAVGVQDRPAGAPKQGA WESDYKLFNRPSFAEAQKGISTIIFAYAGTPAFFPIVSEMRDPRQYTKALVTCQTLVSVTYITIGVVIYYYCGTY VVSPALGSAGPTIKKVSYGVALPGLFVTAILWTHLPAKYVFVRILRGSPHLTANTLSHWITWIGSTLTITIVAYV IASSVPVFDDLVSLVGALFGTLLTIQTMGMMWLYDNWSANKRVHDRRWFIGSMWSVFTILIGTFLMISGTYSCIL AIVKSYRESGGTAAWSCADN* |
Coding | >Ani_SJS100_1|g4303.t1 ATGCTAAAATCAAAGGAAATTAGTAATGGCCCTGAAATCGACCATATGCCTCCACAAGTAGGAGAAGTATTTGAT GCAGAGAAACACGTTCACGATGATGATGCTGTTTTCGGTGACGTGGGTAACAATGGACCCAACTACCGTAATATC GGCCTTGGTGTTCTAGGAATTCCATCAGTTTTGAGCTCGGTGGGACTGATCCCTGGCATTATCCTGTTGCTTGTC ATTGGTGGTATCGCTACCTGGTCGGACTATATTGTCGGTGCCTTCAAGATTCGTCACCGTCACGTTTATAGTATT GACGATGTCGGTGGAATGCTGTTTGGCCCCATTGGCCGTGAAATCTTTGCTGTAGCTCTCTGTCTTTTCTTCACC TTTATTTCGGGCTCAGCCATGCTTAGTATCTCCATTGCCTTCAACGCGCTGTCGAATCATGCCATCTGCACTGCT ATCTTCGTGGTTATCGCAGCTCTTGTAACGTTTGTCTTTGCAAGCATCCGGACCCTTGGACGCATTAGTCCGCTT GCGTGGGTTGGTGCAGCAAGCATTATCATATCTGGCAGGTCTTCCACTAGCGGCATACTATTGATGGCTCTGACT GTTGGGACAGCTTTCATCGTCACAATTGCTGTAGGAGTACAGGACCGGCCCGCAGGAGCTCCCAAGCAAGGGGCT TGGGAGTCAGACTATAAGCTCTTCAATCGCCCATCATTTGCCGAAGCCCAGAAGGGTATTTCGACTATCATATTT GCGTATGCAGGTACCCCGGCCTTCTTTCCCATTGTCTCCGAGATGCGTGACCCGCGCCAGTATACGAAGGCCCTC GTTACATGCCAGACCCTTGTTTCCGTGACATATATCACTATTGGCGTCGTGATCTACTATTACTGCGGCACCTAC GTTGTCTCACCAGCATTGGGCTCAGCAGGGCCGACCATCAAGAAGGTTTCTTATGGTGTGGCTCTGCCTGGACTG TTTGTGACCGCTATCTTGTGGACACATCTCCCTGCCAAGTACGTCTTTGTCCGCATTTTGCGAGGGTCACCGCAT CTCACTGCCAACACTCTAAGCCACTGGATAACATGGATTGGGTCAACCCTCACTATCACCATAGTGGCTTACGTC ATCGCCAGTAGTGTCCCGGTGTTTGATGATTTAGTGTCCCTTGTAGGTGCCCTATTCGGGACTTTGTTGACCATC CAGACCATGGGAATGATGTGGTTGTACGACAATTGGTCAGCCAATAAGAGGGTCCACGATCGGCGGTGGTTTATC GGTTCGATGTGGAGTGTTTTTACTATACTAATCGGCACGTTCTTGATGATTAGTGGAACTTATAGCTGCATTCTC GCCATTGTCAAGTCTTATCGTGAATCTGGCGGCACGGCTGCGTGGAGTTGCGCGGACAACTGA |
Transcript | >Ani_SJS100_1|g4303.t1 ATGCTAAAATCAAAGGAAATTAGTAATGGCCCTGAAATCGACCATATGCCTCCACAAGTAGGAGAAGTATTTGAT GCAGAGAAACACGTTCACGATGATGATGCTGTTTTCGGTGACGTGGGTAACAATGGACCCAACTACCGTAATATC GGCCTTGGTGTTCTAGGAATTCCATCAGTTTTGAGCTCGGTGGGACTGATCCCTGGCATTATCCTGTTGCTTGTC ATTGGTGGTATCGCTACCTGGTCGGACTATATTGTCGGTGCCTTCAAGATTCGTCACCGTCACGTTTATAGTATT GACGATGTCGGTGGAATGCTGTTTGGCCCCATTGGCCGTGAAATCTTTGCTGTAGCTCTCTGTCTTTTCTTCACC TTTATTTCGGGCTCAGCCATGCTTAGTATCTCCATTGCCTTCAACGCGCTGTCGAATCATGCCATCTGCACTGCT ATCTTCGTGGTTATCGCAGCTCTTGTAACGTTTGTCTTTGCAAGCATCCGGACCCTTGGACGCATTAGTCCGCTT GCGTGGGTTGGTGCAGCAAGCATTATCATATCTGGCAGGTCTTCCACTAGCGGCATACTATTGATGGCTCTGACT GTTGGGACAGCTTTCATCGTCACAATTGCTGTAGGAGTACAGGACCGGCCCGCAGGAGCTCCCAAGCAAGGGGCT TGGGAGTCAGACTATAAGCTCTTCAATCGCCCATCATTTGCCGAAGCCCAGAAGGGTATTTCGACTATCATATTT GCGTATGCAGGTACCCCGGCCTTCTTTCCCATTGTCTCCGAGATGCGTGACCCGCGCCAGTATACGAAGGCCCTC GTTACATGCCAGACCCTTGTTTCCGTGACATATATCACTATTGGCGTCGTGATCTACTATTACTGCGGCACCTAC GTTGTCTCACCAGCATTGGGCTCAGCAGGGCCGACCATCAAGAAGGTTTCTTATGGTGTGGCTCTGCCTGGACTG TTTGTGACCGCTATCTTGTGGACACATCTCCCTGCCAAGTACGTCTTTGTCCGCATTTTGCGAGGGTCACCGCAT CTCACTGCCAACACTCTAAGCCACTGGATAACATGGATTGGGTCAACCCTCACTATCACCATAGTGGCTTACGTC ATCGCCAGTAGTGTCCCGGTGTTTGATGATTTAGTGTCCCTTGTAGGTGCCCTATTCGGGACTTTGTTGACCATC CAGACCATGGGAATGATGTGGTTGTACGACAATTGGTCAGCCAATAAGAGGGTCCACGATCGGCGGTGGTTTATC GGTTCGATGTGGAGTGTTTTTACTATACTAATCGGCACGTTCTTGATGATTAGTGGAACTTATAGCTGCATTCTC GCCATTGTCAAGTCTTATCGTGAATCTGGCGGCACGGCTGCGTGGAGTTGCGCGGACAACTGA |
Gene | >Ani_SJS100_1|g4303.t1 ATGCTAAAATCAAAGGAAATTAGTAATGGCCCTGAAATCGACCATATGCCTCCACAAGTAGGAGAAGTATTTGAT GCAGAGAAACACGTTCACGATGATGATGCTGTTTTCGGTGACGTGGGTAACAATGGACCCAACTACCGTAATGTT CGCATTTCACCCAAGCTTCTAAGGACAGTCGCTGATTCCCTCCAGTTAAGATGGATAGGTACTGCAGTGCTGATG ACAAAAACCCAGATCGGCCTTGGTGTTCTAGGAATTCCATCAGTTTTGAGCTCGGTGGGACTGATCCCTGGCATT ATCCTGTTGCTTGTCATTGGTGGTATCGCTACCTGGTCGGACTATATTGTCGGTGCCTTCAAGATTCGTCACCGT CACGTTTATAGTATTGACGATGTCGGTGGAATGCTGTTTGGCCCCATTGGCCGTGAAATCTTTGCTGTAGCTCTC TGTCTTTGTAAGTGTGCCTAATCTTGTCAACTAACTTATCTATCGTCAATGGATTACTAATACTTCCAAACTATT AGTCTTCACCTTTATTTCGGGCTCAGCCATGCTTAGTATCTCCATTGCCTTCAACGCGCTGTCGAATCATGCCAT CTGCACTGCTATCTTCGTGGTTATCGCAGCTCTTGTAACGTTTGTCTTTGCAAGCATCCGGACCCTTGGACGCAT TAGTCCGCTTGCGTGGGTTGGTGCAGCAAGCATTATCATATCTGGCAGGTCTTCCACTAGCGGCATACTATTGAT GGCTCTGACTGTTGGGACAGCTTTCATCGTCACAATTGCTGTAGGAGTACAGGACCGGCCCGCAGGAGCTCCCAA GCAAGGGGCTTGGGAGTCAGACTATAAGCTCTTCAATCGCCCATCATTTGCCGAAGCCCAGAAGGGTATTTCGAC TATCATATTTGCGTATGCAGGTACCCCGGCCTTCTTTCCCATTGTCTCCGAGATGCGTGACCCGCGCCAGTATAC GAAGGCCCTCGTTACATGCCAGACCCTTGTTTCCGTGACATATATCACTATTGGCGTCGTGATCTACTATTACTG CGGCACCTACGTTGTCTCACCAGCATTGGGCTCAGCAGGGCCGACCATCAAGAAGGTTTCTTATGGTGTGGCTCT GCCTGGACTGTTTGTGACCGCTATCTTGTGGACACATGTGGGTATAACTCTTTGATCATTATGGGTGTTCGCTGA CACTGTTGAAGCTCCCTGCCAAGTACGTCTTTGTCCGCATTTTGCGAGGGTCACCGCATCTCACTGCCAACACTC TAAGCCACTGGATAACATGGATTGGGTCAACCCTCACTATCACCATAGTGGCTTACGTCATCGCCAGTAGTGTCC CGGTGTTTGATGATTTAGTGTCCCTTGTAGGTGCCCTATTCGGGACTTTGTTGACCATCCAGACCATGGGAATGA TGTGGTTGTACGACAATTGGTCAGCCAATAAGAGGGTCCACGATCGGCGGTGGTTTATCGGTTCGATGTGGAGTG TTTTTACTATACTAATCGGCACGTTCTTGATGATTAGTGGAACTTATAGCTGCATTCTCGCCATTGTCAAGTCTT ATCGTGAATCTGGCGGCACGGCTGCGTGGAGTTGCGCGGACAACTGA |