© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ani_SJS100_1|g43.t1 |
| Gene name | |
| Location | scaffold_001:149733..152626 |
| Strand | + |
| Gene length (bp) | 2893 |
| Transcript length (bp) | 2826 |
| Coding sequence length (bp) | 2826 |
| Protein length (aa) | 942 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF04109 | ATG9 | Autophagy protein ATG9 | 1.2E-211 | 208 | 697 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0006914 | autophagy | Yes |
| GO:0044248 | cellular catabolic process | No |
| GO:0008150 | biological_process | No |
| GO:0009056 | catabolic process | No |
| GO:0008152 | metabolic process | No |
| GO:0061919 | process utilizing autophagic mechanism | No |
| GO:0009987 | cellular process | No |
| GO:0044237 | cellular metabolic process | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 18 | 0.45 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 235 | 257 | 22 |
| 2 | 288 | 307 | 19 |
| 3 | 458 | 480 | 22 |
| 4 | 541 | 563 | 22 |
| 5 | 578 | 597 | 19 |
| 6 | 645 | 667 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS100_1|g43.t1 MMTSNILSRFLPPNGSPSVYETIRQHDNHSDASDVEERAGMAFEDEHGDRFSDRELEDALADAGRDDSPGPSEPF LPRSPPTKRDEGGFLKAGSRRRKFSRSGRIHAASPRHKFDDSDDDVPPSLLVEGDQDDDDVLRSKLPPPPRSIDP PNVEPPPRPSPRDDRVHWEAARDRLPLHDTNRRAHHASLWSAGYPNLALVDPKEKALWMWANVENLDNFLKEVYT YFLGNGIWSILLNRVLSLLTFAFVVGFSIFLTNCIDYHKVRGSRTLDDILIQKCTKQMSMSATFLLWLLSFFWIG KAFQYLLDIRRLKHMHDFYHYLLGISDAEIQSISWQEVVSRLMTLRDSNPATAGAVSAKHRKFMGSQSKQRMDAH DIANRLMRKENYLIALINKDILDLTLPIPFLRNRQLFSRTLEWNINLCIMDYVFNEQGQVRTLFLKDTHRRALSE GLRRRFMFAGIMNIFVAPFIVVYFMMHYFFRYFNEYKKNPSQIGSRQYTPLAEWKFREFNELWHLFERRVNMSYP FASRYVDQFPKDKMVQFAGFVAFVSGALASVLALASVVDPELFLGFEITHDRTVLFYLGVFGSIWAVAQGLVPEE TNVFDPEYALLEVINFTHYFPGHWKGRLHSDDVRKDFAVLYQMKIVIFLEEILSMIFTPFILWFSLPKCSDRLID FFREFTVHVDGMGYLCSFAVFDFKKGTNVISQGDTGRRDAARQDLRADYFSTKDGKMLASYYGFLDNYGANPRSG HPSTKRQFHPPPTFPTLGSPSAIEMGNFGDRPAAAGLMGQQSTYGAAPRFGPAGMGDHLSPAPSMLLDPHHQPSA SGFRSTHRANPYPRYRASRPPPTISDPIEDEDPPAGKGRSAVKSSPGVGSSGGGIGTSDSNLGESWRMNLVGDEV EEEDEGGENVDTLAGGGGVLGLIQQFQKVNQDNRGRTTVGI* |
| Coding | >Ani_SJS100_1|g43.t1 ATGATGACCTCCAATATCTTATCGCGTTTCCTCCCTCCAAACGGCTCCCCGTCAGTGTATGAGACGATTCGACAA CACGACAATCATTCGGACGCTTCGGACGTGGAGGAGCGTGCAGGAATGGCGTTTGAGGATGAACATGGGGACCGG TTCAGCGACCGTGAGCTGGAAGATGCTCTAGCAGATGCTGGGAGGGATGACTCCCCCGGTCCGAGCGAACCGTTT CTCCCCCGAAGCCCGCCAACAAAAAGGGACGAGGGTGGCTTCCTCAAGGCCGGTTCTCGTCGCCGCAAGTTTAGT CGCTCTGGTCGGATACATGCAGCTTCACCGCGTCATAAATTCGATGATAGCGATGATGATGTTCCTCCCTCACTC CTCGTGGAAGGAGATCAAGATGACGATGACGTTTTGAGATCGAAGCTCCCACCTCCGCCCCGATCGATTGACCCT CCGAATGTTGAACCTCCGCCCAGACCATCACCTCGAGACGACCGAGTCCACTGGGAAGCAGCCCGCGATCGATTA CCGCTACATGACACCAATAGGCGGGCCCATCATGCAAGTCTGTGGTCAGCGGGATATCCGAACCTAGCACTGGTA GATCCGAAAGAGAAGGCACTATGGATGTGGGCAAACGTGGAGAATCTGGACAACTTTTTGAAGGAAGTCTACACA TACTTTCTTGGGAACGGAATTTGGTCGATTCTGCTGAACAGGGTTTTGAGTCTTCTGACATTTGCATTTGTCGTA GGATTCAGCATATTCCTCACAAACTGCATTGACTACCACAAGGTACGCGGGAGTCGAACTCTGGACGACATTCTG ATTCAGAAGTGTACAAAGCAAATGTCCATGTCCGCTACCTTCTTACTATGGCTGCTTTCTTTTTTCTGGATTGGC AAGGCCTTTCAGTACTTGCTAGATATCAGAAGGCTCAAGCACATGCATGACTTTTATCACTACTTGCTTGGAATA TCGGATGCTGAAATCCAATCAATTTCCTGGCAAGAGGTCGTCAGCCGATTGATGACTCTGAGGGACTCCAACCCC GCGACTGCGGGTGCGGTCTCTGCGAAGCATCGCAAGTTCATGGGGAGTCAGTCCAAGCAGCGCATGGATGCTCAC GACATCGCGAACCGACTGATGCGCAAAGAAAACTACCTGATTGCGTTGATAAATAAAGATATACTAGACCTGACG CTCCCGATACCGTTCCTGCGAAACAGGCAACTGTTCTCTCGGACACTTGAATGGAATATCAACCTCTGCATCATG GATTATGTCTTCAACGAGCAGGGCCAAGTGCGGACGTTGTTCTTGAAAGATACCCATCGACGGGCCCTGAGTGAA GGCCTGCGACGGCGTTTCATGTTCGCAGGCATCATGAATATCTTCGTAGCCCCCTTCATTGTCGTCTATTTCATG ATGCACTATTTCTTCCGCTATTTCAATGAATACAAGAAGAATCCATCGCAGATCGGATCCCGACAATACACCCCA CTGGCTGAATGGAAGTTTCGTGAGTTCAACGAGCTATGGCACCTGTTTGAGCGGCGTGTCAATATGTCTTACCCT TTCGCGAGCCGCTATGTGGATCAGTTCCCCAAAGACAAGATGGTGCAATTCGCGGGTTTCGTGGCGTTCGTCTCT GGGGCACTGGCCTCGGTATTGGCCCTGGCTTCCGTGGTGGACCCGGAGCTGTTCTTGGGCTTTGAGATCACTCAC GACCGGACCGTGCTTTTCTACTTGGGTGTCTTCGGTTCTATCTGGGCTGTCGCGCAGGGTTTGGTACCCGAAGAG ACCAATGTGTTTGATCCCGAATACGCGCTCCTTGAAGTCATCAACTTCACTCATTACTTCCCAGGCCACTGGAAA GGCCGTCTGCATAGCGACGATGTTCGCAAGGACTTTGCCGTGCTGTATCAGATGAAGATCGTCATCTTCCTGGAG GAGATCCTAAGCATGATCTTCACGCCGTTCATCCTCTGGTTCAGTCTGCCCAAGTGCAGTGACCGTCTCATCGAC TTCTTCCGAGAATTCACCGTCCATGTCGATGGGATGGGATATCTCTGCTCCTTTGCGGTCTTCGACTTCAAGAAG GGTACCAACGTGATCTCGCAAGGGGATACGGGTCGACGGGATGCTGCACGGCAGGACCTTCGGGCGGACTACTTT TCGACCAAGGATGGTAAGATGCTCGCATCTTATTACGGGTTCTTGGACAACTATGGTGCCAATCCGCGCAGTGGT CATCCGTCAACCAAGCGGCAATTCCACCCTCCACCCACATTCCCGACCCTTGGTTCTCCATCGGCCATTGAGATG GGCAATTTTGGAGATCGACCGGCCGCAGCTGGGCTGATGGGTCAACAATCTACATACGGCGCCGCTCCTCGGTTT GGCCCCGCTGGCATGGGCGACCATCTCTCCCCGGCACCATCAATGCTGCTCGACCCGCACCATCAGCCGTCGGCG TCAGGGTTCCGGTCAACGCACCGCGCTAACCCGTATCCGCGCTATAGGGCCTCGCGACCGCCTCCCACCATCTCC GACCCCATTGAAGATGAAGATCCTCCGGCGGGCAAAGGTCGTAGTGCGGTTAAATCGTCGCCCGGGGTCGGGTCG AGCGGGGGCGGCATAGGCACGAGTGACAGTAACTTGGGGGAGTCATGGCGGATGAACCTGGTCGGCGATGAGGTT GAGGAGGAAGATGAGGGCGGCGAGAATGTCGACACCCTGGCTGGCGGTGGGGGTGTCCTGGGGCTCATTCAGCAG TTTCAGAAAGTCAACCAGGACAATCGGGGACGGACGACGGTTGGTATATAA |
| Transcript | >Ani_SJS100_1|g43.t1 ATGATGACCTCCAATATCTTATCGCGTTTCCTCCCTCCAAACGGCTCCCCGTCAGTGTATGAGACGATTCGACAA CACGACAATCATTCGGACGCTTCGGACGTGGAGGAGCGTGCAGGAATGGCGTTTGAGGATGAACATGGGGACCGG TTCAGCGACCGTGAGCTGGAAGATGCTCTAGCAGATGCTGGGAGGGATGACTCCCCCGGTCCGAGCGAACCGTTT CTCCCCCGAAGCCCGCCAACAAAAAGGGACGAGGGTGGCTTCCTCAAGGCCGGTTCTCGTCGCCGCAAGTTTAGT CGCTCTGGTCGGATACATGCAGCTTCACCGCGTCATAAATTCGATGATAGCGATGATGATGTTCCTCCCTCACTC CTCGTGGAAGGAGATCAAGATGACGATGACGTTTTGAGATCGAAGCTCCCACCTCCGCCCCGATCGATTGACCCT CCGAATGTTGAACCTCCGCCCAGACCATCACCTCGAGACGACCGAGTCCACTGGGAAGCAGCCCGCGATCGATTA CCGCTACATGACACCAATAGGCGGGCCCATCATGCAAGTCTGTGGTCAGCGGGATATCCGAACCTAGCACTGGTA GATCCGAAAGAGAAGGCACTATGGATGTGGGCAAACGTGGAGAATCTGGACAACTTTTTGAAGGAAGTCTACACA TACTTTCTTGGGAACGGAATTTGGTCGATTCTGCTGAACAGGGTTTTGAGTCTTCTGACATTTGCATTTGTCGTA GGATTCAGCATATTCCTCACAAACTGCATTGACTACCACAAGGTACGCGGGAGTCGAACTCTGGACGACATTCTG ATTCAGAAGTGTACAAAGCAAATGTCCATGTCCGCTACCTTCTTACTATGGCTGCTTTCTTTTTTCTGGATTGGC AAGGCCTTTCAGTACTTGCTAGATATCAGAAGGCTCAAGCACATGCATGACTTTTATCACTACTTGCTTGGAATA TCGGATGCTGAAATCCAATCAATTTCCTGGCAAGAGGTCGTCAGCCGATTGATGACTCTGAGGGACTCCAACCCC GCGACTGCGGGTGCGGTCTCTGCGAAGCATCGCAAGTTCATGGGGAGTCAGTCCAAGCAGCGCATGGATGCTCAC GACATCGCGAACCGACTGATGCGCAAAGAAAACTACCTGATTGCGTTGATAAATAAAGATATACTAGACCTGACG CTCCCGATACCGTTCCTGCGAAACAGGCAACTGTTCTCTCGGACACTTGAATGGAATATCAACCTCTGCATCATG GATTATGTCTTCAACGAGCAGGGCCAAGTGCGGACGTTGTTCTTGAAAGATACCCATCGACGGGCCCTGAGTGAA GGCCTGCGACGGCGTTTCATGTTCGCAGGCATCATGAATATCTTCGTAGCCCCCTTCATTGTCGTCTATTTCATG ATGCACTATTTCTTCCGCTATTTCAATGAATACAAGAAGAATCCATCGCAGATCGGATCCCGACAATACACCCCA CTGGCTGAATGGAAGTTTCGTGAGTTCAACGAGCTATGGCACCTGTTTGAGCGGCGTGTCAATATGTCTTACCCT TTCGCGAGCCGCTATGTGGATCAGTTCCCCAAAGACAAGATGGTGCAATTCGCGGGTTTCGTGGCGTTCGTCTCT GGGGCACTGGCCTCGGTATTGGCCCTGGCTTCCGTGGTGGACCCGGAGCTGTTCTTGGGCTTTGAGATCACTCAC GACCGGACCGTGCTTTTCTACTTGGGTGTCTTCGGTTCTATCTGGGCTGTCGCGCAGGGTTTGGTACCCGAAGAG ACCAATGTGTTTGATCCCGAATACGCGCTCCTTGAAGTCATCAACTTCACTCATTACTTCCCAGGCCACTGGAAA GGCCGTCTGCATAGCGACGATGTTCGCAAGGACTTTGCCGTGCTGTATCAGATGAAGATCGTCATCTTCCTGGAG GAGATCCTAAGCATGATCTTCACGCCGTTCATCCTCTGGTTCAGTCTGCCCAAGTGCAGTGACCGTCTCATCGAC TTCTTCCGAGAATTCACCGTCCATGTCGATGGGATGGGATATCTCTGCTCCTTTGCGGTCTTCGACTTCAAGAAG GGTACCAACGTGATCTCGCAAGGGGATACGGGTCGACGGGATGCTGCACGGCAGGACCTTCGGGCGGACTACTTT TCGACCAAGGATGGTAAGATGCTCGCATCTTATTACGGGTTCTTGGACAACTATGGTGCCAATCCGCGCAGTGGT CATCCGTCAACCAAGCGGCAATTCCACCCTCCACCCACATTCCCGACCCTTGGTTCTCCATCGGCCATTGAGATG GGCAATTTTGGAGATCGACCGGCCGCAGCTGGGCTGATGGGTCAACAATCTACATACGGCGCCGCTCCTCGGTTT GGCCCCGCTGGCATGGGCGACCATCTCTCCCCGGCACCATCAATGCTGCTCGACCCGCACCATCAGCCGTCGGCG TCAGGGTTCCGGTCAACGCACCGCGCTAACCCGTATCCGCGCTATAGGGCCTCGCGACCGCCTCCCACCATCTCC GACCCCATTGAAGATGAAGATCCTCCGGCGGGCAAAGGTCGTAGTGCGGTTAAATCGTCGCCCGGGGTCGGGTCG AGCGGGGGCGGCATAGGCACGAGTGACAGTAACTTGGGGGAGTCATGGCGGATGAACCTGGTCGGCGATGAGGTT GAGGAGGAAGATGAGGGCGGCGAGAATGTCGACACCCTGGCTGGCGGTGGGGGTGTCCTGGGGCTCATTCAGCAG TTTCAGAAAGTCAACCAGGACAATCGGGGACGGACGACGGTTGGTATATAA |
| Gene | >Ani_SJS100_1|g43.t1 ATGATGACCTCCAATATCTTATCGCGTTTCCTCCCTCCAAACGGCTCCCCGTCAGTGTATGAGACGATTCGACAA CACGACAATCATTCGGACGCTTCGGACGTGGAGGAGCGTGCAGGAATGGCGTTTGAGGATGAACATGGGGACCGG TTCAGCGACCGTGAGCTGGAAGATGCTCTAGCAGATGCTGGGAGGGATGACTCCCCCGGTCCGAGCGAACCGTTT CTCCCCCGAAGCCCGCCAACAAAAAGGGACGAGGGTGGCTTCCTCAAGGCCGGTTCTCGTCGCCGCAAGTTTAGT CGCTCTGGTCGGATACATGCAGCTTCACCGCGTCATAAATTCGATGATAGCGATGATGATGTTCCTCCCTCACTC CTCGTGGAAGGAGATCAAGATGACGATGACGTTTTGAGATCGAAGCTCCCACCTCCGCCCCGATCGATTGACCCT CCGAATGTTGAACCTCCGCCCAGACCATCACCTCGAGACGACCGAGTCCACTGGGAAGCAGCCCGCGATCGATTA CCGCTACATGACACCAATAGGCGGGCCCATCATGCAAGTCTGTGGTCAGCGGGATATCCGAACCTAGCACTGGTA GATCCGAAAGAGAAGGCACTATGGATGTGGGCAAACGTGGAGAATCTGGACAACTTTTTGAAGGAAGTCTACACA TACTTTCTTGGGAACGGAATTTGGTCGATTCTGCTGAACAGGGTTTTGAGTCTTCTGTAGGTCTCCCTTCCCCAT GCTTAAGTTCGCCTGAATGTTCAAGACTGACTGACACATGGGGTTCAGGACATTTGCATTTGTCGTAGGATTCAG CATATTCCTCACAAACTGCATTGACTACCACAAGGTACGCGGGAGTCGAACTCTGGACGACATTCTGATTCAGAA GTGTACAAAGCAAATGTCCATGTCCGCTACCTTCTTACTATGGCTGCTTTCTTTTTTCTGGATTGGCAAGGCCTT TCAGTACTTGCTAGATATCAGAAGGCTCAAGCACATGCATGACTTTTATCACTACTTGCTTGGAATATCGGATGC TGAAATCCAATCAATTTCCTGGCAAGAGGTCGTCAGCCGATTGATGACTCTGAGGGACTCCAACCCCGCGACTGC GGGTGCGGTCTCTGCGAAGCATCGCAAGTTCATGGGGAGTCAGTCCAAGCAGCGCATGGATGCTCACGACATCGC GAACCGACTGATGCGCAAAGAAAACTACCTGATTGCGTTGATAAATAAAGATATACTAGACCTGACGCTCCCGAT ACCGTTCCTGCGAAACAGGCAACTGTTCTCTCGGACACTTGAATGGAATATCAACCTCTGCATCATGGATTATGT CTTCAACGAGCAGGGCCAAGTGCGGACGTTGTTCTTGAAAGATACCCATCGACGGGCCCTGAGTGAAGGCCTGCG ACGGCGTTTCATGTTCGCAGGCATCATGAATATCTTCGTAGCCCCCTTCATTGTCGTCTATTTCATGATGCACTA TTTCTTCCGCTATTTCAATGAATACAAGAAGAATCCATCGCAGATCGGATCCCGACAATACACCCCACTGGCTGA ATGGAAGTTTCGTGAGTTCAACGAGCTATGGCACCTGTTTGAGCGGCGTGTCAATATGTCTTACCCTTTCGCGAG CCGCTATGTGGATCAGTTCCCCAAAGACAAGATGGTGCAATTCGCGGGTTTCGTGGCGTTCGTCTCTGGGGCACT GGCCTCGGTATTGGCCCTGGCTTCCGTGGTGGACCCGGAGCTGTTCTTGGGCTTTGAGATCACTCACGACCGGAC CGTGCTTTTCTACTTGGGTGTCTTCGGTTCTATCTGGGCTGTCGCGCAGGGTTTGGTACCCGAAGAGACCAATGT GTTTGATCCCGAATACGCGCTCCTTGAAGTCATCAACTTCACTCATTACTTCCCAGGCCACTGGAAAGGCCGTCT GCATAGCGACGATGTTCGCAAGGACTTTGCCGTGCTGTATCAGATGAAGATCGTCATCTTCCTGGAGGAGATCCT AAGCATGATCTTCACGCCGTTCATCCTCTGGTTCAGTCTGCCCAAGTGCAGTGACCGTCTCATCGACTTCTTCCG AGAATTCACCGTCCATGTCGATGGGATGGGATATCTCTGCTCCTTTGCGGTCTTCGACTTCAAGAAGGGTACCAA CGTGATCTCGCAAGGGGATACGGGTCGACGGGATGCTGCACGGCAGGACCTTCGGGCGGACTACTTTTCGACCAA GGATGGTAAGATGCTCGCATCTTATTACGGGTTCTTGGACAACTATGGTGCCAATCCGCGCAGTGGTCATCCGTC AACCAAGCGGCAATTCCACCCTCCACCCACATTCCCGACCCTTGGTTCTCCATCGGCCATTGAGATGGGCAATTT TGGAGATCGACCGGCCGCAGCTGGGCTGATGGGTCAACAATCTACATACGGCGCCGCTCCTCGGTTTGGCCCCGC TGGCATGGGCGACCATCTCTCCCCGGCACCATCAATGCTGCTCGACCCGCACCATCAGCCGTCGGCGTCAGGGTT CCGGTCAACGCACCGCGCTAACCCGTATCCGCGCTATAGGGCCTCGCGACCGCCTCCCACCATCTCCGACCCCAT TGAAGATGAAGATCCTCCGGCGGGCAAAGGTCGTAGTGCGGTTAAATCGTCGCCCGGGGTCGGGTCGAGCGGGGG CGGCATAGGCACGAGTGACAGTAACTTGGGGGAGTCATGGCGGATGAACCTGGTCGGCGATGAGGTTGAGGAGGA AGATGAGGGCGGCGAGAATGTCGACACCCTGGCTGGCGGTGGGGGTGTCCTGGGGCTCATTCAGCAGTTTCAGAA AGTCAACCAGGACAATCGGGGACGGACGACGGTTGGTATATAA |