Fungal Genomics

at Utrecht University

General Properties

Protein ID	Ani_SJS100_1\|g4276.t1
Gene name
Location	scaffold_021:223066..224224
Strand	+
Gene length (bp)	1158
Transcript length (bp)	1041
Coding sequence length (bp)	1041
Protein length (aa)	347

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF04495	GRASP55_65	GRASP55/65 PDZ-like domain	3.6E-41	80	213

GO

(None)

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 22	0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Ani_SJS100_1\|g4276.t1 MFGALNRFIGLDAEPTRQARAQSTSDNSFGFQVLRNKDAELPLEPWFDFIVGINGRLIEDPDPNLFATEVRNCAG SSVTFEVWSAKGQKTHTVSIPVPASNPDLGLALQLAPLSSTQNIWHVLSIPSPLSPAYRAGLLPHSDYIIGTPSG TLRGESALGELVEDHLNRTLVLWVYNSEFDVVREVELVPTRGWGGEGALGAELGFGALHRLPVGLGEEVEGPGEV VFEMRDDGSSAPVVEALGQGPPPSGHFLVPANMTSPPPLSGPPRNLAASPASHSSAGRRHKTRHTGSAAAVSFDD YFAEGEQKSKEQDFAPSRRGTPLPPPPKAGVRSPPSSGSPAPAAAE*
Coding	>Ani_SJS100_1\|g4276.t1 ATGTTCGGGGCTCTAAATCGGTTTATTGGCTTGGATGCCGAGCCTACCCGGCAGGCGCGGGCTCAAAGCACCAGC GACAACTCGTTTGGATTCCAGGTCCTTCGCAACAAGGATGCGGAGCTCCCTCTAGAGCCGTGGTTCGATTTCATT GTCGGGATTAATGGGCGGTTAATAGAGGATCCCGACCCCAACCTCTTCGCTACGGAAGTGCGCAACTGCGCCGGA TCCAGCGTGACCTTTGAAGTCTGGAGCGCCAAGGGTCAAAAAACACACACTGTCTCCATCCCCGTCCCCGCATCC AACCCCGATCTGGGCCTGGCGCTCCAACTAGCCCCCCTCTCCTCCACCCAAAACATCTGGCACGTCCTGTCGATC CCCTCTCCGCTCAGTCCCGCCTACCGCGCAGGCCTCCTTCCACACTCTGACTACATTATTGGCACTCCGAGCGGG ACATTACGTGGGGAATCGGCACTTGGCGAGCTTGTCGAAGACCACCTGAACCGCACACTAGTCCTATGGGTATAC AACAGCGAGTTTGATGTGGTGCGCGAGGTCGAGCTGGTGCCTACACGGGGCTGGGGAGGTGAGGGGGCTCTTGGC GCAGAATTGGGCTTTGGAGCACTACACCGGTTACCGGTCGGCCTGGGCGAGGAAGTAGAAGGTCCAGGAGAAGTG GTCTTTGAGATGCGGGACGATGGCTCATCCGCGCCGGTAGTGGAAGCTCTGGGCCAGGGGCCCCCGCCGTCTGGA CATTTCCTGGTCCCGGCTAACATGACCTCTCCTCCGCCGTTGTCGGGACCTCCCAGGAATCTGGCAGCGTCGCCA GCTAGTCATTCGTCTGCGGGTCGGCGGCATAAGACGCGTCATACCGGGTCAGCTGCTGCAGTGTCGTTTGATGAC TACTTTGCGGAGGGCGAGCAGAAGAGCAAGGAGCAAGACTTCGCGCCGTCCCGCAGGGGAACGCCGCTACCGCCT CCGCCCAAGGCTGGGGTGCGGTCACCGCCTAGCTCGGGCAGTCCGGCGCCAGCGGCTGCCGAATAG
Transcript	>Ani_SJS100_1\|g4276.t1 ATGTTCGGGGCTCTAAATCGGTTTATTGGCTTGGATGCCGAGCCTACCCGGCAGGCGCGGGCTCAAAGCACCAGC GACAACTCGTTTGGATTCCAGGTCCTTCGCAACAAGGATGCGGAGCTCCCTCTAGAGCCGTGGTTCGATTTCATT GTCGGGATTAATGGGCGGTTAATAGAGGATCCCGACCCCAACCTCTTCGCTACGGAAGTGCGCAACTGCGCCGGA TCCAGCGTGACCTTTGAAGTCTGGAGCGCCAAGGGTCAAAAAACACACACTGTCTCCATCCCCGTCCCCGCATCC AACCCCGATCTGGGCCTGGCGCTCCAACTAGCCCCCCTCTCCTCCACCCAAAACATCTGGCACGTCCTGTCGATC CCCTCTCCGCTCAGTCCCGCCTACCGCGCAGGCCTCCTTCCACACTCTGACTACATTATTGGCACTCCGAGCGGG ACATTACGTGGGGAATCGGCACTTGGCGAGCTTGTCGAAGACCACCTGAACCGCACACTAGTCCTATGGGTATAC AACAGCGAGTTTGATGTGGTGCGCGAGGTCGAGCTGGTGCCTACACGGGGCTGGGGAGGTGAGGGGGCTCTTGGC GCAGAATTGGGCTTTGGAGCACTACACCGGTTACCGGTCGGCCTGGGCGAGGAAGTAGAAGGTCCAGGAGAAGTG GTCTTTGAGATGCGGGACGATGGCTCATCCGCGCCGGTAGTGGAAGCTCTGGGCCAGGGGCCCCCGCCGTCTGGA CATTTCCTGGTCCCGGCTAACATGACCTCTCCTCCGCCGTTGTCGGGACCTCCCAGGAATCTGGCAGCGTCGCCA GCTAGTCATTCGTCTGCGGGTCGGCGGCATAAGACGCGTCATACCGGGTCAGCTGCTGCAGTGTCGTTTGATGAC TACTTTGCGGAGGGCGAGCAGAAGAGCAAGGAGCAAGACTTCGCGCCGTCCCGCAGGGGAACGCCGCTACCGCCT CCGCCCAAGGCTGGGGTGCGGTCACCGCCTAGCTCGGGCAGTCCGGCGCCAGCGGCTGCCGAATAG
Gene	>Ani_SJS100_1\|g4276.t1 ATGTTCGGGGCTCTAAATCGGTTTATTGGCTTGGATGCCGAGCCTACCCGGCAGGCGCGGGCTCAAAGCACCAGC GACAACTCGTTTGGATTCCAGGTCCTTCGCAACAAGGATGCGGAGCTCCCTCTAGAGCCGTGGTTCGATTTCATT GTCGGGATTAATGGGCGGTTAATAGTAAGACACTTCACTCTACAGGCAGACCTCTTGACATGCGCGGGTTCGACT AACTAGCTACCAGGAGGATCCCGACCCCAACCTCTTCGCTACGGAAGTGCGCAACTGCGCCGGATCCAGCGTGAC CTTTGAAGTCTGGAGCGCCAAGGTACAAACATATTCCAATATCCTCCGGTTAAATCTACTAATATCGTTGTGAAG GGTCAAAAAACACACACTGTCTCCATCCCCGTCCCCGCATCCAACCCCGATCTGGGCCTGGCGCTCCAACTAGCC CCCCTCTCCTCCACCCAAAACATCTGGCACGTCCTGTCGATCCCCTCTCCGCTCAGTCCCGCCTACCGCGCAGGC CTCCTTCCACACTCTGACTACATTATTGGCACTCCGAGCGGGACATTACGTGGGGAATCGGCACTTGGCGAGCTT GTCGAAGACCACCTGAACCGCACACTAGTCCTATGGGTATACAACAGCGAGTTTGATGTGGTGCGCGAGGTCGAG CTGGTGCCTACACGGGGCTGGGGAGGTGAGGGGGCTCTTGGCGCAGAATTGGGCTTTGGAGCACTACACCGGTTA CCGGTCGGCCTGGGCGAGGAAGTAGAAGGTCCAGGAGAAGTGGTCTTTGAGATGCGGGACGATGGCTCATCCGCG CCGGTAGTGGAAGCTCTGGGCCAGGGGCCCCCGCCGTCTGGACATTTCCTGGTCCCGGCTAACATGACCTCTCCT CCGCCGTTGTCGGGACCTCCCAGGAATCTGGCAGCGTCGCCAGCTAGTCATTCGTCTGCGGGTCGGCGGCATAAG ACGCGTCATACCGGGTCAGCTGCTGCAGTGTCGTTTGATGACTACTTTGCGGAGGGCGAGCAGAAGAGCAAGGAG CAAGACTTCGCGCCGTCCCGCAGGGGAACGCCGCTACCGCCTCCGCCCAAGGCTGGGGTGCGGTCACCGCCTAGC TCGGGCAGTCCGGCGCCAGCGGCTGCCGAATAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail