Fungal Genomics

at Utrecht University

General Properties

Protein IDAni_SJS100_1|g4276.t1
Gene name
Locationscaffold_021:223066..224224
Strand+
Gene length (bp)1158
Transcript length (bp)1041
Coding sequence length (bp)1041
Protein length (aa) 347

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF04495 GRASP55_65 GRASP55/65 PDZ-like domain 3.6E-41 80 213

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 22 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ani_SJS100_1|g4276.t1
MFGALNRFIGLDAEPTRQARAQSTSDNSFGFQVLRNKDAELPLEPWFDFIVGINGRLIEDPDPNLFATEVRNCAG
SSVTFEVWSAKGQKTHTVSIPVPASNPDLGLALQLAPLSSTQNIWHVLSIPSPLSPAYRAGLLPHSDYIIGTPSG
TLRGESALGELVEDHLNRTLVLWVYNSEFDVVREVELVPTRGWGGEGALGAELGFGALHRLPVGLGEEVEGPGEV
VFEMRDDGSSAPVVEALGQGPPPSGHFLVPANMTSPPPLSGPPRNLAASPASHSSAGRRHKTRHTGSAAAVSFDD
YFAEGEQKSKEQDFAPSRRGTPLPPPPKAGVRSPPSSGSPAPAAAE*
Coding >Ani_SJS100_1|g4276.t1
ATGTTCGGGGCTCTAAATCGGTTTATTGGCTTGGATGCCGAGCCTACCCGGCAGGCGCGGGCTCAAAGCACCAGC
GACAACTCGTTTGGATTCCAGGTCCTTCGCAACAAGGATGCGGAGCTCCCTCTAGAGCCGTGGTTCGATTTCATT
GTCGGGATTAATGGGCGGTTAATAGAGGATCCCGACCCCAACCTCTTCGCTACGGAAGTGCGCAACTGCGCCGGA
TCCAGCGTGACCTTTGAAGTCTGGAGCGCCAAGGGTCAAAAAACACACACTGTCTCCATCCCCGTCCCCGCATCC
AACCCCGATCTGGGCCTGGCGCTCCAACTAGCCCCCCTCTCCTCCACCCAAAACATCTGGCACGTCCTGTCGATC
CCCTCTCCGCTCAGTCCCGCCTACCGCGCAGGCCTCCTTCCACACTCTGACTACATTATTGGCACTCCGAGCGGG
ACATTACGTGGGGAATCGGCACTTGGCGAGCTTGTCGAAGACCACCTGAACCGCACACTAGTCCTATGGGTATAC
AACAGCGAGTTTGATGTGGTGCGCGAGGTCGAGCTGGTGCCTACACGGGGCTGGGGAGGTGAGGGGGCTCTTGGC
GCAGAATTGGGCTTTGGAGCACTACACCGGTTACCGGTCGGCCTGGGCGAGGAAGTAGAAGGTCCAGGAGAAGTG
GTCTTTGAGATGCGGGACGATGGCTCATCCGCGCCGGTAGTGGAAGCTCTGGGCCAGGGGCCCCCGCCGTCTGGA
CATTTCCTGGTCCCGGCTAACATGACCTCTCCTCCGCCGTTGTCGGGACCTCCCAGGAATCTGGCAGCGTCGCCA
GCTAGTCATTCGTCTGCGGGTCGGCGGCATAAGACGCGTCATACCGGGTCAGCTGCTGCAGTGTCGTTTGATGAC
TACTTTGCGGAGGGCGAGCAGAAGAGCAAGGAGCAAGACTTCGCGCCGTCCCGCAGGGGAACGCCGCTACCGCCT
CCGCCCAAGGCTGGGGTGCGGTCACCGCCTAGCTCGGGCAGTCCGGCGCCAGCGGCTGCCGAATAG
Transcript >Ani_SJS100_1|g4276.t1
ATGTTCGGGGCTCTAAATCGGTTTATTGGCTTGGATGCCGAGCCTACCCGGCAGGCGCGGGCTCAAAGCACCAGC
GACAACTCGTTTGGATTCCAGGTCCTTCGCAACAAGGATGCGGAGCTCCCTCTAGAGCCGTGGTTCGATTTCATT
GTCGGGATTAATGGGCGGTTAATAGAGGATCCCGACCCCAACCTCTTCGCTACGGAAGTGCGCAACTGCGCCGGA
TCCAGCGTGACCTTTGAAGTCTGGAGCGCCAAGGGTCAAAAAACACACACTGTCTCCATCCCCGTCCCCGCATCC
AACCCCGATCTGGGCCTGGCGCTCCAACTAGCCCCCCTCTCCTCCACCCAAAACATCTGGCACGTCCTGTCGATC
CCCTCTCCGCTCAGTCCCGCCTACCGCGCAGGCCTCCTTCCACACTCTGACTACATTATTGGCACTCCGAGCGGG
ACATTACGTGGGGAATCGGCACTTGGCGAGCTTGTCGAAGACCACCTGAACCGCACACTAGTCCTATGGGTATAC
AACAGCGAGTTTGATGTGGTGCGCGAGGTCGAGCTGGTGCCTACACGGGGCTGGGGAGGTGAGGGGGCTCTTGGC
GCAGAATTGGGCTTTGGAGCACTACACCGGTTACCGGTCGGCCTGGGCGAGGAAGTAGAAGGTCCAGGAGAAGTG
GTCTTTGAGATGCGGGACGATGGCTCATCCGCGCCGGTAGTGGAAGCTCTGGGCCAGGGGCCCCCGCCGTCTGGA
CATTTCCTGGTCCCGGCTAACATGACCTCTCCTCCGCCGTTGTCGGGACCTCCCAGGAATCTGGCAGCGTCGCCA
GCTAGTCATTCGTCTGCGGGTCGGCGGCATAAGACGCGTCATACCGGGTCAGCTGCTGCAGTGTCGTTTGATGAC
TACTTTGCGGAGGGCGAGCAGAAGAGCAAGGAGCAAGACTTCGCGCCGTCCCGCAGGGGAACGCCGCTACCGCCT
CCGCCCAAGGCTGGGGTGCGGTCACCGCCTAGCTCGGGCAGTCCGGCGCCAGCGGCTGCCGAATAG
Gene >Ani_SJS100_1|g4276.t1
ATGTTCGGGGCTCTAAATCGGTTTATTGGCTTGGATGCCGAGCCTACCCGGCAGGCGCGGGCTCAAAGCACCAGC
GACAACTCGTTTGGATTCCAGGTCCTTCGCAACAAGGATGCGGAGCTCCCTCTAGAGCCGTGGTTCGATTTCATT
GTCGGGATTAATGGGCGGTTAATAGTAAGACACTTCACTCTACAGGCAGACCTCTTGACATGCGCGGGTTCGACT
AACTAGCTACCAGGAGGATCCCGACCCCAACCTCTTCGCTACGGAAGTGCGCAACTGCGCCGGATCCAGCGTGAC
CTTTGAAGTCTGGAGCGCCAAGGTACAAACATATTCCAATATCCTCCGGTTAAATCTACTAATATCGTTGTGAAG
GGTCAAAAAACACACACTGTCTCCATCCCCGTCCCCGCATCCAACCCCGATCTGGGCCTGGCGCTCCAACTAGCC
CCCCTCTCCTCCACCCAAAACATCTGGCACGTCCTGTCGATCCCCTCTCCGCTCAGTCCCGCCTACCGCGCAGGC
CTCCTTCCACACTCTGACTACATTATTGGCACTCCGAGCGGGACATTACGTGGGGAATCGGCACTTGGCGAGCTT
GTCGAAGACCACCTGAACCGCACACTAGTCCTATGGGTATACAACAGCGAGTTTGATGTGGTGCGCGAGGTCGAG
CTGGTGCCTACACGGGGCTGGGGAGGTGAGGGGGCTCTTGGCGCAGAATTGGGCTTTGGAGCACTACACCGGTTA
CCGGTCGGCCTGGGCGAGGAAGTAGAAGGTCCAGGAGAAGTGGTCTTTGAGATGCGGGACGATGGCTCATCCGCG
CCGGTAGTGGAAGCTCTGGGCCAGGGGCCCCCGCCGTCTGGACATTTCCTGGTCCCGGCTAACATGACCTCTCCT
CCGCCGTTGTCGGGACCTCCCAGGAATCTGGCAGCGTCGCCAGCTAGTCATTCGTCTGCGGGTCGGCGGCATAAG
ACGCGTCATACCGGGTCAGCTGCTGCAGTGTCGTTTGATGACTACTTTGCGGAGGGCGAGCAGAAGAGCAAGGAG
CAAGACTTCGCGCCGTCCCGCAGGGGAACGCCGCTACCGCCTCCGCCCAAGGCTGGGGTGCGGTCACCGCCTAGC
TCGGGCAGTCCGGCGCCAGCGGCTGCCGAATAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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