© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ani_SJS100_1|g4275.t1 |
| Gene name | |
| Location | scaffold_021:221946..222849 |
| Strand | - |
| Gene length (bp) | 903 |
| Transcript length (bp) | 723 |
| Coding sequence length (bp) | 723 |
| Protein length (aa) | 241 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF09445 | Methyltransf_15 | RNA cap guanine-N2 methyltransferase | 2.2E-51 | 78 | 235 |
| PF02475 | Met_10 | Met-10+ like-protein | 6.2E-11 | 77 | 221 |
| PF03602 | Cons_hypoth95 | Conserved hypothetical protein 95 | 1.0E-07 | 75 | 160 |
| PF01170 | UPF0020 | Putative RNA methylase family UPF0020 | 3.6E-05 | 100 | 159 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0008168 | methyltransferase activity | Yes |
| GO:0001510 | RNA methylation | Yes |
| GO:0009452 | 7-methylguanosine RNA capping | Yes |
| GO:0044237 | cellular metabolic process | No |
| GO:0090304 | nucleic acid metabolic process | No |
| GO:1901360 | organic cyclic compound metabolic process | No |
| GO:0016070 | RNA metabolic process | No |
| GO:0071704 | organic substance metabolic process | No |
| GO:0043170 | macromolecule metabolic process | No |
| GO:0044238 | primary metabolic process | No |
| GO:0016740 | transferase activity | No |
| GO:0003674 | molecular_function | No |
| GO:0006396 | RNA processing | No |
| GO:0043412 | macromolecule modification | No |
| GO:0009987 | cellular process | No |
| GO:0008152 | metabolic process | No |
| GO:0032259 | methylation | No |
| GO:0044260 | cellular macromolecule metabolic process | No |
| GO:0034641 | cellular nitrogen compound metabolic process | No |
| GO:0036260 | RNA capping | No |
| GO:0043414 | macromolecule methylation | No |
| GO:0006725 | cellular aromatic compound metabolic process | No |
| GO:0006807 | nitrogen compound metabolic process | No |
| GO:0008150 | biological_process | No |
| GO:0046483 | heterocycle metabolic process | No |
| GO:0003824 | catalytic activity | No |
| GO:0016741 | transferase activity, transferring one-carbon groups | No |
| GO:0006139 | nucleobase-containing compound metabolic process | No |
| GO:0009451 | RNA modification | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 65 | 0.45 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS100_1|g4275.t1 MARDPTVEVPPEEVHHYNDIGEVPWDIQNYWAQRYKIFSKYDEGVWLTDDAWFGVTPEPVANKIAEHMAQSAPAG RSILVDAFAGAGGNSIAFALSGRWKRVYAIEKNPAVLQCAKHNAKIYGVADKITWFEGDCFEIIKNQLKDLAPYS VVFASPPWGGPGYRSDTVFNLSTMEPYSLAKLYKEYSLFTEHIVLYLPRTSDVKQMAKVVKEGQKSVVMHYCMEG ASKALCVYYGGFNLE* |
| Coding | >Ani_SJS100_1|g4275.t1 ATGGCTCGAGACCCTACCGTGGAGGTTCCTCCGGAGGAAGTACATCATTACAATGATATCGGCGAGGTGCCCTGG GATATTCAGAACTACTGGGCGCAACGCTACAAGATCTTTTCCAAGTATGATGAGGGTGTCTGGCTGACTGATGAT GCCTGGTTTGGGGTAACACCCGAGCCAGTAGCCAACAAAATAGCAGAACACATGGCGCAATCCGCTCCCGCAGGA CGCAGCATCCTAGTAGATGCATTCGCTGGCGCGGGCGGCAACTCAATCGCTTTCGCGCTGTCTGGTAGATGGAAG CGTGTCTACGCCATCGAGAAGAACCCCGCTGTCTTGCAGTGCGCCAAACACAACGCCAAGATCTACGGCGTCGCA GACAAGATCACCTGGTTCGAGGGAGATTGTTTCGAAATCATCAAGAATCAGCTGAAGGACTTGGCGCCGTATAGT GTGGTGTTTGCCAGTCCCCCATGGGGTGGCCCCGGGTATCGCTCCGACACGGTGTTTAATCTGAGTACGATGGAG CCGTACTCTCTCGCAAAACTTTACAAAGAGTATTCTCTGTTCACAGAACACATAGTTCTCTACCTTCCTCGGACA TCGGACGTCAAGCAGATGGCCAAGGTTGTCAAGGAGGGCCAAAAGTCAGTGGTGATGCATTACTGCATGGAAGGT GCTAGCAAGGCGTTGTGTGTTTATTATGGGGGCTTCAATCTCGAATGA |
| Transcript | >Ani_SJS100_1|g4275.t1 ATGGCTCGAGACCCTACCGTGGAGGTTCCTCCGGAGGAAGTACATCATTACAATGATATCGGCGAGGTGCCCTGG GATATTCAGAACTACTGGGCGCAACGCTACAAGATCTTTTCCAAGTATGATGAGGGTGTCTGGCTGACTGATGAT GCCTGGTTTGGGGTAACACCCGAGCCAGTAGCCAACAAAATAGCAGAACACATGGCGCAATCCGCTCCCGCAGGA CGCAGCATCCTAGTAGATGCATTCGCTGGCGCGGGCGGCAACTCAATCGCTTTCGCGCTGTCTGGTAGATGGAAG CGTGTCTACGCCATCGAGAAGAACCCCGCTGTCTTGCAGTGCGCCAAACACAACGCCAAGATCTACGGCGTCGCA GACAAGATCACCTGGTTCGAGGGAGATTGTTTCGAAATCATCAAGAATCAGCTGAAGGACTTGGCGCCGTATAGT GTGGTGTTTGCCAGTCCCCCATGGGGTGGCCCCGGGTATCGCTCCGACACGGTGTTTAATCTGAGTACGATGGAG CCGTACTCTCTCGCAAAACTTTACAAAGAGTATTCTCTGTTCACAGAACACATAGTTCTCTACCTTCCTCGGACA TCGGACGTCAAGCAGATGGCCAAGGTTGTCAAGGAGGGCCAAAAGTCAGTGGTGATGCATTACTGCATGGAAGGT GCTAGCAAGGCGTTGTGTGTTTATTATGGGGGCTTCAATCTCGAATGA |
| Gene | >Ani_SJS100_1|g4275.t1 ATGGCTCGAGACCCTACCGTGGAGGTTCCTCCGGAGGAAGTACATCATTACAATGATATCGGCGAGGTGCCCTGG GATATTCAGAAGTAAGACCATCATCCCCCGTCTATATGTTGCGGAACTGAAATCGACTAACACTGGCGCAACAGC TACTGGGCGCAACGCTACAAGATCTTTTCCAAGTATGATGAGGGTGTCTGGCTGACTGATGATGCCTGGTTTGGG GTAACACCCGAGCCAGTAGCCAAGTAGGTGTTCCATCATCTACTCACAGGATCCGGGTAGCTAATACACCACGGC AGCAAAATAGCAGAACACATGGCGCAATCCGCTCCCGCAGGACGCAGCATCCTAGTAGATGCATTCGCTGGCGCG GGCGGCAACTCAATCGCTTTCGCGCTGTCTGGTAGATGGAAGCGTGTCTACGCCATCGAGAAGAACCCCGCTGTC TTGCAGTGCGCCAAACACAACGCCAAGATCTACGGCGTCGCAGACAAGATCACCTGGTTCGAGGGAGATTGTTTC GAAATCATCAAGAATCAGCTGAAGGACTTGGCGCCGTATAGTGTGGTGTTTGCCAGTCCCCCATGGGGTGGTATG TGTCCAAACCATTCGCTTAACCTTCTAGGTACCTTGGCAGCAAGCTGATCCAATTTAGGCCCCGGGTATCGCTCC GACACGGTGTTTAATCTGAGTACGATGGAGCCGTACTCTCTCGCAAAACTTTACAAAGAGTATTCTCTGTTCACA GAACACATAGTTCTCTACCTTCCTCGGACATCGGACGTCAAGCAGATGGCCAAGGTTGTCAAGGAGGGCCAAAAG TCAGTGGTGATGCATTACTGCATGGAAGGTGCTAGCAAGGCGTTGTGTGTTTATTATGGGGGCTTCAATCTCGAA TGA |