Fungal Genomics

at Utrecht University

General Properties

Protein IDAni_SJS100_1|g4262.t1
Gene name
Locationscaffold_021:178107..179348
Strand-
Gene length (bp)1241
Transcript length (bp)957
Coding sequence length (bp)957
Protein length (aa) 319

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF05368 NmrA NmrA-like family 3.1E-23 4 227
PF13460 NAD_binding_10 NAD(P)H-binding 2.2E-18 8 147
PF01370 Epimerase NAD dependent epimerase/dehydratase family 1.8E-06 4 83

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 16 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ani_SJS100_1|g4262.t1
MVKIAIAGGSGGVGREVIDALIAANKHEIIVLTRKDASAKTSIQGITWVKADYSDITQLTKVLQGVHTVLSFVTA
QDDPASTVQKNLIDAAVQAGVKRFAPSEWASSGLDYLDWYAYKGETRRYLQELNKERMVLEYTLFQPGVFVNYLT
HPHQSARHLPTIGTPFDFANRRMILVDGDDKARLTWTAVQDLAGVVARAVDYEGEWPVVGGIQGANISVGQLITL
GEKVRGGLSFTIERVKAQDLEAGTWETSWTPTVDHASIPPEQAAVASKYMTSRIILAADAGSYLVSDEWNRLLPD
FKFTAIEEFLAEAWKGKA*
Coding >Ani_SJS100_1|g4262.t1
ATGGTCAAAATTGCAATTGCTGGTGGCTCTGGCGGTGTTGGCCGAGAGGTCATCGACGCACTCATTGCTGCGAAT
AAGCATGAGATCATTGTCCTTACCAGAAAGGATGCCTCAGCCAAAACTTCTATTCAAGGCATCACTTGGGTAAAG
GCCGATTACAGCGACATTACCCAATTAACCAAAGTTCTGCAAGGAGTGCACACTGTTCTCTCCTTCGTCACCGCG
CAGGATGATCCCGCAAGCACCGTTCAGAAGAACCTCATCGATGCCGCTGTGCAGGCCGGAGTGAAGCGCTTCGCG
CCGAGTGAATGGGCCTCATCCGGCTTAGATTACCTGGACTGGTACGCTTACAAAGGCGAGACGCGCCGATACCTC
CAAGAGCTGAACAAGGAGAGAATGGTCCTCGAGTATACTCTCTTCCAACCCGGCGTGTTCGTCAACTATCTGACC
CATCCACATCAATCGGCCCGCCACCTGCCCACGATCGGAACTCCCTTTGATTTTGCCAACCGCCGAATGATCTTG
GTGGATGGGGACGATAAGGCCCGTCTCACCTGGACGGCTGTTCAGGACCTTGCTGGAGTTGTAGCTAGAGCTGTC
GACTACGAGGGCGAGTGGCCGGTGGTTGGGGGTATCCAGGGTGCTAATATCTCCGTTGGCCAACTCATCACTCTG
GGAGAGAAGGTTCGCGGTGGGCTGTCCTTCACAATCGAACGGGTGAAGGCGCAGGACCTTGAAGCCGGAACGTGG
GAAACCTCATGGACACCAACAGTGGATCACGCTTCCATTCCGCCCGAGCAGGCGGCAGTGGCTTCAAAGTATATG
ACCAGTCGAATTATTTTGGCGGCTGATGCTGGCTCCTATCTAGTCTCCGATGAATGGAACCGTCTACTGCCTGAC
TTCAAATTTACAGCCATCGAGGAGTTCTTGGCTGAGGCGTGGAAGGGAAAGGCTTGA
Transcript >Ani_SJS100_1|g4262.t1
ATGGTCAAAATTGCAATTGCTGGTGGCTCTGGCGGTGTTGGCCGAGAGGTCATCGACGCACTCATTGCTGCGAAT
AAGCATGAGATCATTGTCCTTACCAGAAAGGATGCCTCAGCCAAAACTTCTATTCAAGGCATCACTTGGGTAAAG
GCCGATTACAGCGACATTACCCAATTAACCAAAGTTCTGCAAGGAGTGCACACTGTTCTCTCCTTCGTCACCGCG
CAGGATGATCCCGCAAGCACCGTTCAGAAGAACCTCATCGATGCCGCTGTGCAGGCCGGAGTGAAGCGCTTCGCG
CCGAGTGAATGGGCCTCATCCGGCTTAGATTACCTGGACTGGTACGCTTACAAAGGCGAGACGCGCCGATACCTC
CAAGAGCTGAACAAGGAGAGAATGGTCCTCGAGTATACTCTCTTCCAACCCGGCGTGTTCGTCAACTATCTGACC
CATCCACATCAATCGGCCCGCCACCTGCCCACGATCGGAACTCCCTTTGATTTTGCCAACCGCCGAATGATCTTG
GTGGATGGGGACGATAAGGCCCGTCTCACCTGGACGGCTGTTCAGGACCTTGCTGGAGTTGTAGCTAGAGCTGTC
GACTACGAGGGCGAGTGGCCGGTGGTTGGGGGTATCCAGGGTGCTAATATCTCCGTTGGCCAACTCATCACTCTG
GGAGAGAAGGTTCGCGGTGGGCTGTCCTTCACAATCGAACGGGTGAAGGCGCAGGACCTTGAAGCCGGAACGTGG
GAAACCTCATGGACACCAACAGTGGATCACGCTTCCATTCCGCCCGAGCAGGCGGCAGTGGCTTCAAAGTATATG
ACCAGTCGAATTATTTTGGCGGCTGATGCTGGCTCCTATCTAGTCTCCGATGAATGGAACCGTCTACTGCCTGAC
TTCAAATTTACAGCCATCGAGGAGTTCTTGGCTGAGGCGTGGAAGGGAAAGGCTTGA
Gene >Ani_SJS100_1|g4262.t1
ATGGTCAAAATTGCAATTGCTGGTGGCTCTGGCGGTAGGTCCTTCCCGCTGTGCCTGCTCTGGTCAGTTATATTA
CTGACCTTCAACCAGGTGTTGGCCGAGAGGTCATCGACGCACTCATTGCTGCGAATAAGCATGAGATCATTGTCC
TTACCAGAAAGGTTGGCTATCTCATAATATTCGTAGCCAATGAGAGTATTGTGACATTAACCAGCCCCTGTAGGA
TGCCTCAGCCAAAACTTCTATTCAAGGCATCACTTGGGTAAAGGCCGATTACAGCGACATTACCCAATTAACCAA
AGTTCTGCAAGGAGTGCACACTGTTCTCTCCTTCGTCACCGCGCAGGATGATCCCGCAAGCACCGTTCAGAAGAA
CCTCATCGATGCCGCTGTGCAGGCCGGAGTGAAGCGCTTCGCGCCGAGTGAATGGGCCTCGTGAGAATTCTGCAT
CCTGGTTCTACCATCATCCAAACACTGACCTAGTACAGATCCGGCTTAGATTACCTGGACTGGTACGCTTACAAA
GGCGAGACGCGCCGATACCTCCAAGAGCTGAACAAGGAGAGAATGGTACGATCAGGCAGCATTTCAGTGGGCGGA
ATAGCTAACAGTAAATAAACCAGGTCCTCGAGTATACTCTCTTCCAACCCGGCGTGTTCGTCAACTATCTGACCC
ATCCACATCAATCGGCCCGCCACCTGCCCACGATCGGAACTCCCTTTGATTTTGCCAACCGCCGAATGATCTTGG
TGGATGGGGACGATAAGGCCCGTCTCACCTGGACGGCTGTTCAGGACCTTGCTGGAGTTGTAGCTAGAGCTGTCG
ACTACGAGGGCGAGTGGCCGGTGGTTGGGGGTATCCAGGGTGCTAATATCTCCGTTGGCCAACTCATCACTCTGG
GAGAGAAGGTTCGCGGTGAGTTTATAATCTCTCAGGCTATGCCATATAAATTGTATGTTGACTATTTCTCTCTAG
GTGGGCTGTCCTTCACAATCGAACGGGTGAAGGCGCAGGACCTTGAAGCCGGAACGTGGGAAACCTCATGGACAC
CAACAGTGGATCACGCTTCCATTCCGCCCGAGCAGGCGGCAGTGGCTTCAAAGTATATGACCAGTCGAATTATTT
TGGCGGCTGATGCTGGCTCCTATCTAGTCTCCGATGAATGGAACCGTCTACTGCCTGACTTCAAATTTACAGCCA
TCGAGGAGTTCTTGGCTGAGGCGTGGAAGGGAAAGGCTTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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