Fungal Genomics

at Utrecht University

General Properties

Protein IDAni_SJS100_1|g4248.t1
Gene name
Locationscaffold_021:141200..142328
Strand+
Gene length (bp)1128
Transcript length (bp)954
Coding sequence length (bp)954
Protein length (aa) 318

Your browser does not support drawing a protein figure.

PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF01569 PAP2 PAP2 superfamily 1.5E-25 113 259

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 11 0.5

Transmembrane Domains

Domain # Start End Length
1 32 54 22
2 80 102 22
3 111 130 19
4 184 203 19
5 210 227 17
6 237 255 18

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ani_SJS100_1|g4248.t1
MPRSGLAAGSASPRSPVREATGTMSRLYQRSYPVVDAVALACIVGAWILIQIFATPFHRMFSLDNKSIQYPFAVV
ERVPVVWSIVYAGVIPFLVLLAWAAVFRPYPHKVQVTLLGFLIALMLTSLITDIIKNAAGRPRPDLISRCLPRKG
TPKDLLVSWTVCTQTNEHILQEGWRSFPSGHSSFSFGGLGYMSLFLSGQMHVFRPRTDLCRCLVAFVPLLGALLI
AISRLDDYRHDVYDVTCGSLLGLTVAYFSYRRYYPALRSIKCDCPYGRDDIIGPDGFSKLPGDEEQQLPGSASVA
RQWDARESYQLAESASS*
Coding >Ani_SJS100_1|g4248.t1
ATGCCTCGCAGTGGACTTGCTGCTGGCTCAGCAAGCCCCCGCTCCCCAGTGAGAGAAGCAACTGGCACAATGTCC
CGCTTGTATCAGCGCTCGTACCCGGTCGTCGACGCTGTCGCGCTGGCGTGCATTGTAGGGGCTTGGATACTGATT
CAGATTTTTGCGACTCCCTTTCATCGCATGTTCTCCCTCGACAATAAAAGTATCCAGTATCCCTTCGCTGTCGTG
GAGAGAGTTCCCGTTGTTTGGTCTATCGTCTATGCTGGGGTCATTCCGTTTCTTGTCCTCCTCGCCTGGGCAGCT
GTGTTCCGTCCATACCCTCACAAGGTCCAAGTGACCTTGCTGGGCTTCCTCATCGCGCTTATGCTAACGAGCCTT
ATCACCGATATCATAAAGAACGCCGCTGGGCGACCTCGCCCTGATTTGATTTCTCGCTGTTTACCAAGGAAGGGT
ACCCCCAAGGATTTGTTGGTCTCATGGACGGTGTGCACTCAAACCAACGAGCACATCCTACAAGAAGGATGGAGG
AGTTTTCCCAGTGGCCACAGTAGCTTCTCATTTGGTGGACTCGGTTATATGTCATTATTCCTCTCCGGTCAAATG
CACGTCTTCAGACCGAGGACCGACCTCTGTCGCTGCCTTGTGGCTTTTGTTCCGCTCCTCGGCGCTCTGTTAATT
GCCATTTCTCGTCTGGACGACTACCGTCACGATGTGTACGATGTTACTTGTGGATCGCTGCTTGGGTTGACGGTA
GCTTATTTCTCATACCGACGATATTATCCGGCCCTTCGGTCAATCAAGTGCGACTGCCCCTATGGCAGAGACGAT
ATCATCGGCCCAGATGGATTCTCCAAACTGCCTGGTGATGAGGAACAGCAACTGCCGGGCTCAGCATCTGTTGCG
CGTCAATGGGATGCTCGGGAATCCTATCAACTTGCGGAGTCTGCATCCTCGTAA
Transcript >Ani_SJS100_1|g4248.t1
ATGCCTCGCAGTGGACTTGCTGCTGGCTCAGCAAGCCCCCGCTCCCCAGTGAGAGAAGCAACTGGCACAATGTCC
CGCTTGTATCAGCGCTCGTACCCGGTCGTCGACGCTGTCGCGCTGGCGTGCATTGTAGGGGCTTGGATACTGATT
CAGATTTTTGCGACTCCCTTTCATCGCATGTTCTCCCTCGACAATAAAAGTATCCAGTATCCCTTCGCTGTCGTG
GAGAGAGTTCCCGTTGTTTGGTCTATCGTCTATGCTGGGGTCATTCCGTTTCTTGTCCTCCTCGCCTGGGCAGCT
GTGTTCCGTCCATACCCTCACAAGGTCCAAGTGACCTTGCTGGGCTTCCTCATCGCGCTTATGCTAACGAGCCTT
ATCACCGATATCATAAAGAACGCCGCTGGGCGACCTCGCCCTGATTTGATTTCTCGCTGTTTACCAAGGAAGGGT
ACCCCCAAGGATTTGTTGGTCTCATGGACGGTGTGCACTCAAACCAACGAGCACATCCTACAAGAAGGATGGAGG
AGTTTTCCCAGTGGCCACAGTAGCTTCTCATTTGGTGGACTCGGTTATATGTCATTATTCCTCTCCGGTCAAATG
CACGTCTTCAGACCGAGGACCGACCTCTGTCGCTGCCTTGTGGCTTTTGTTCCGCTCCTCGGCGCTCTGTTAATT
GCCATTTCTCGTCTGGACGACTACCGTCACGATGTGTACGATGTTACTTGTGGATCGCTGCTTGGGTTGACGGTA
GCTTATTTCTCATACCGACGATATTATCCGGCCCTTCGGTCAATCAAGTGCGACTGCCCCTATGGCAGAGACGAT
ATCATCGGCCCAGATGGATTCTCCAAACTGCCTGGTGATGAGGAACAGCAACTGCCGGGCTCAGCATCTGTTGCG
CGTCAATGGGATGCTCGGGAATCCTATCAACTTGCGGAGTCTGCATCCTCGTAA
Gene >Ani_SJS100_1|g4248.t1
ATGCCTCGCAGTGGACTTGCTGCTGGCTCAGCAAGCCCCCGCTCCCCAGTGAGAGAAGCAACTGGCACAATGTCC
CGCTTGTATCAGCGCTCGTACCCGGTCGTCGACGCTGTCGCGCTGGCGTGCATTGTAGGGGCTTGGATACTGGTA
CGTCTTCAGTCCTGCCTCTCGATTGGCTCATACACTAATTAGAATGTTTCATGTAGATTCAGATTTTTGCGACTC
CCTTTCATCGCATGTTCTCCCTCGACAATAAAAGTATCCAGTATCCCTTCGCTGTCGTGGAGAGAGTTCCCGTTG
GTGAGATGCTGCACCCTGCCCCGTCACCGTCGACTTTCCTTGTTGCTTACTATTGATTCTTAGTTTGGTCTATCG
TCTATGCTGGGGTCATTCCGTTTCTTGTCCTCCTCGCCTGGGCAGCTGTGTTCCGTCCATACCCTCACAAGGTCC
AAGTGACCTTGCTGGGCTTCCTCATCGCGCTTATGCTAACGAGCCTTATCACCGATATCATAAAGAACGCCGCTG
GGCGACCTCGCCCTGATTTGATTTCTCGCTGTTTACCAAGGAAGGGTACCCCCAAGGATTTGTTGGTCTCATGGA
CGGTGTGCACTCAAACCAACGAGCACATCCTACAAGAAGGATGGAGGAGTTTTCCCAGTGGCCACAGTAGCTTCT
CATTTGGTGGACTCGGTTATATGTCATTGTAAGCTTCAATGCCGCGAGAGCTCAGAGAAAGCGCGCTGATTTATT
TCCAGATTCCTCTCCGGTCAAATGCACGTCTTCAGACCGAGGACCGACCTCTGTCGCTGCCTTGTGGCTTTTGTT
CCGCTCCTCGGCGCTCTGTTAATTGCCATTTCTCGTCTGGACGACTACCGTCACGATGTGTACGATGTTACTTGT
GGATCGCTGCTTGGGTTGACGGTAGCTTATTTCTCATACCGACGATATTATCCGGCCCTTCGGTCAATCAAGTGC
GACTGCCCCTATGGCAGAGACGATATCATCGGCCCAGATGGATTCTCCAAACTGCCTGGTGATGAGGAACAGCAA
CTGCCGGGCTCAGCATCTGTTGCGCGTCAATGGGATGCTCGGGAATCCTATCAACTTGCGGAGTCTGCATCCTCG
TAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail