© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ani_SJS100_1|g4245.t1 |
| Gene name | |
| Location | scaffold_021:134354..136273 |
| Strand | + |
| Gene length (bp) | 1919 |
| Transcript length (bp) | 1659 |
| Coding sequence length (bp) | 1659 |
| Protein length (aa) | 553 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF00083 | Sugar_tr | Sugar (and other) transporter | 1.5E-119 | 56 | 522 |
| PF07690 | MFS_1 | Major Facilitator Superfamily | 5.2E-19 | 95 | 375 |
| PF07690 | MFS_1 | Major Facilitator Superfamily | 1.4E-10 | 326 | 516 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0055085 | transmembrane transport | Yes |
| GO:0016021 | integral component of membrane | Yes |
| GO:0022857 | transmembrane transporter activity | Yes |
| GO:0110165 | cellular anatomical entity | No |
| GO:0008150 | biological_process | No |
| GO:0005575 | cellular_component | No |
| GO:0031224 | intrinsic component of membrane | No |
| GO:0051234 | establishment of localization | No |
| GO:0051179 | localization | No |
| GO:0009987 | cellular process | No |
| GO:0005215 | transporter activity | No |
| GO:0006810 | transport | No |
| GO:0003674 | molecular_function | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 58 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 45 | 67 | 22 |
| 2 | 89 | 111 | 22 |
| 3 | 124 | 144 | 20 |
| 4 | 149 | 171 | 22 |
| 5 | 184 | 203 | 19 |
| 6 | 218 | 237 | 19 |
| 7 | 322 | 344 | 22 |
| 8 | 354 | 373 | 19 |
| 9 | 386 | 408 | 22 |
| 10 | 423 | 445 | 22 |
| 11 | 458 | 480 | 22 |
| 12 | 485 | 507 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS100_1|g4245.t1 MDKKPIDPAKELSPDGRSSIQGGTAHHAEDPLPEREPYGPPGIRGLIANPFVLMCAACSTLGGLTFGYDQGVVSV ILVMDQFLERFPEVNSGFWKGLMTAMIELGAFLGAMNQGWIADKISRRYSIIVAVCIFTVGSVLQTAAVDYAMLT VARLIGGVGIGMLSMVAPLYISEISPPECRGTLLVMEELFIVLGIVIAYWITYGTRYMSGEWAWRLPFLLQLIPG FILMAGVIVLPFSPRWLVAKGRVEEALQSLSKLRQLPPSDKRVRQELLDIKAEVRFHQELNVEKHPNLQGGGLKN AILLDLACWADCFKKGCWRRTHIGVMMMFFQQFVGINALIYYAPTLFETMGLDYSMQLLMSGIVNVGQLVGVITS ISTMDKFGRRALLLWGVAIMAICHIIVAILVSLYSDNWPAHRAQGWASVALLLVYMVAFGGSWGPVGWALPAEVF PSSLRAKGVALSTCSNWLNNFIIGLITPPLVEDTGYGAYVFFAVFCSLAFVWTLFFVPETKGKSLEQMDQVFKDN SSEAEQARRRAIEADLLREEEQAVIEA* |
| Coding | >Ani_SJS100_1|g4245.t1 ATGGATAAGAAGCCCATCGATCCTGCAAAGGAGCTGTCGCCGGATGGTCGTTCATCCATCCAAGGGGGCACTGCT CACCATGCAGAGGACCCTCTCCCCGAAAGGGAACCCTATGGCCCCCCAGGCATCAGGGGTCTTATAGCAAACCCC TTCGTCCTCATGTGTGCCGCTTGCTCGACACTAGGAGGTCTCACGTTTGGGTACGATCAAGGCGTAGTCTCGGTC ATTCTAGTCATGGACCAATTCTTGGAACGTTTCCCCGAGGTGAACTCAGGCTTCTGGAAAGGTCTCATGACGGCA ATGATCGAGTTGGGGGCATTCCTCGGTGCTATGAACCAAGGTTGGATAGCGGACAAAATCTCTCGTCGTTATTCA ATCATTGTTGCAGTCTGTATTTTCACAGTGGGGTCAGTACTGCAGACAGCAGCGGTTGACTATGCCATGTTGACT GTCGCACGACTGATTGGTGGAGTGGGAATTGGCATGTTGTCCATGGTGGCGCCCTTGTACATCTCGGAAATAAGC CCTCCCGAGTGTCGCGGTACGCTTCTGGTGATGGAAGAATTGTTTATTGTTCTCGGAATTGTCATTGCATACTGG ATCACGTACGGCACTCGGTATATGTCTGGAGAGTGGGCATGGCGCCTCCCCTTCCTGCTGCAGTTGATCCCGGGC TTCATCTTGATGGCGGGTGTCATCGTATTGCCTTTCTCTCCAAGATGGCTTGTCGCGAAAGGAAGGGTAGAGGAG GCTCTCCAGAGTTTGTCGAAATTGCGTCAATTGCCTCCATCCGATAAGCGCGTCAGACAGGAGCTTCTGGACATC AAAGCAGAGGTCCGATTCCATCAGGAACTCAACGTAGAAAAGCACCCCAATTTGCAAGGTGGTGGACTCAAGAAC GCAATCTTGTTGGATCTGGCATGCTGGGCCGATTGCTTCAAGAAGGGTTGCTGGCGGAGGACGCACATTGGTGTC ATGATGATGTTCTTTCAACAGTTCGTTGGAATCAATGCCCTCATTTACTATGCACCTACACTGTTCGAGACTATG GGATTAGACTACAGCATGCAACTCCTGATGTCGGGTATTGTGAACGTGGGACAGTTGGTGGGCGTGATCACCAGT ATCTCAACCATGGACAAATTCGGTCGACGGGCTCTTCTGCTCTGGGGTGTAGCTATTATGGCAATTTGTCACATT ATCGTGGCCATCTTGGTCAGCCTCTACTCCGACAACTGGCCCGCGCACCGCGCCCAGGGTTGGGCCAGTGTCGCT CTTCTACTTGTGTACATGGTCGCTTTTGGTGGCTCATGGGGTCCAGTAGGGTGGGCGCTGCCAGCTGAGGTCTTT CCTTCTTCTCTCCGTGCCAAGGGTGTGGCCCTCTCAACCTGTTCCAACTGGCTGAACAATTTTATTATTGGCTTG ATCACGCCGCCGCTTGTTGAAGATACCGGATACGGTGCTTACGTATTCTTTGCAGTCTTCTGTTCACTGGCCTTC GTATGGACACTCTTCTTTGTCCCTGAGACCAAGGGCAAGTCTCTGGAGCAGATGGATCAGGTCTTCAAGGATAAC TCGAGCGAAGCTGAACAAGCTCGTAGACGTGCTATCGAGGCTGATCTGTTGCGAGAGGAGGAGCAGGCCGTGATT GAGGCCTAA |
| Transcript | >Ani_SJS100_1|g4245.t1 ATGGATAAGAAGCCCATCGATCCTGCAAAGGAGCTGTCGCCGGATGGTCGTTCATCCATCCAAGGGGGCACTGCT CACCATGCAGAGGACCCTCTCCCCGAAAGGGAACCCTATGGCCCCCCAGGCATCAGGGGTCTTATAGCAAACCCC TTCGTCCTCATGTGTGCCGCTTGCTCGACACTAGGAGGTCTCACGTTTGGGTACGATCAAGGCGTAGTCTCGGTC ATTCTAGTCATGGACCAATTCTTGGAACGTTTCCCCGAGGTGAACTCAGGCTTCTGGAAAGGTCTCATGACGGCA ATGATCGAGTTGGGGGCATTCCTCGGTGCTATGAACCAAGGTTGGATAGCGGACAAAATCTCTCGTCGTTATTCA ATCATTGTTGCAGTCTGTATTTTCACAGTGGGGTCAGTACTGCAGACAGCAGCGGTTGACTATGCCATGTTGACT GTCGCACGACTGATTGGTGGAGTGGGAATTGGCATGTTGTCCATGGTGGCGCCCTTGTACATCTCGGAAATAAGC CCTCCCGAGTGTCGCGGTACGCTTCTGGTGATGGAAGAATTGTTTATTGTTCTCGGAATTGTCATTGCATACTGG ATCACGTACGGCACTCGGTATATGTCTGGAGAGTGGGCATGGCGCCTCCCCTTCCTGCTGCAGTTGATCCCGGGC TTCATCTTGATGGCGGGTGTCATCGTATTGCCTTTCTCTCCAAGATGGCTTGTCGCGAAAGGAAGGGTAGAGGAG GCTCTCCAGAGTTTGTCGAAATTGCGTCAATTGCCTCCATCCGATAAGCGCGTCAGACAGGAGCTTCTGGACATC AAAGCAGAGGTCCGATTCCATCAGGAACTCAACGTAGAAAAGCACCCCAATTTGCAAGGTGGTGGACTCAAGAAC GCAATCTTGTTGGATCTGGCATGCTGGGCCGATTGCTTCAAGAAGGGTTGCTGGCGGAGGACGCACATTGGTGTC ATGATGATGTTCTTTCAACAGTTCGTTGGAATCAATGCCCTCATTTACTATGCACCTACACTGTTCGAGACTATG GGATTAGACTACAGCATGCAACTCCTGATGTCGGGTATTGTGAACGTGGGACAGTTGGTGGGCGTGATCACCAGT ATCTCAACCATGGACAAATTCGGTCGACGGGCTCTTCTGCTCTGGGGTGTAGCTATTATGGCAATTTGTCACATT ATCGTGGCCATCTTGGTCAGCCTCTACTCCGACAACTGGCCCGCGCACCGCGCCCAGGGTTGGGCCAGTGTCGCT CTTCTACTTGTGTACATGGTCGCTTTTGGTGGCTCATGGGGTCCAGTAGGGTGGGCGCTGCCAGCTGAGGTCTTT CCTTCTTCTCTCCGTGCCAAGGGTGTGGCCCTCTCAACCTGTTCCAACTGGCTGAACAATTTTATTATTGGCTTG ATCACGCCGCCGCTTGTTGAAGATACCGGATACGGTGCTTACGTATTCTTTGCAGTCTTCTGTTCACTGGCCTTC GTATGGACACTCTTCTTTGTCCCTGAGACCAAGGGCAAGTCTCTGGAGCAGATGGATCAGGTCTTCAAGGATAAC TCGAGCGAAGCTGAACAAGCTCGTAGACGTGCTATCGAGGCTGATCTGTTGCGAGAGGAGGAGCAGGCCGTGATT GAGGCCTAA |
| Gene | >Ani_SJS100_1|g4245.t1 ATGGATAAGAAGCCCATCGATCCTGCAAAGGAGCTGTCGCCGGATGGTCGTTCATCCATCCAAGGGGGCACTGCT CACCATGCAGAGGACCCTCTCCCCGAAAGGGAACCCTATGGCCCCCCAGGCATCAGGGGTCTTATAGCAAACCCC TTCGTCCTCATGTGTGCCGCTTGCTCGACACTAGGAGGTCTCACGTTTGGGTACGATCAAGGCGTAGTCTCGGTC ATTCTAGTCATGGACCAATTCTTGGAACGTTTCCCCGAGGTGAACTCAGGCTTCTGGAAAGGTCTCATGACGGCA ATGATCGAGTTGGGGGCATTCCTCGGTGCTATGAACCAAGGTTGGATAGCGGACAAAATCTCTCGTCGTTATTCA ATCATTGTTGCAGTCTGTATTTTCACAGTGGGGTCAGTACTGCAGACAGCAGCGGTTGACTATGCCATGTTGACT GTCGCACGACTGATTGGTGGAGTGGGAATTGGCATGTTGTCCATGGTGGCGCCCTTGTACATCTCGGAAATAAGT GAGTATTGTGACTGTTCCATACCGAACCTGGTTTCATGACTTGTACAATGAGCGTCAGCTGACCTGTATTTTTAA TAGGCCCTCCCGAGTGTCGCGGTACGCTTCTGGTGATGGAAGAATTGTTTATTGTTCTCGGAATTGTCATTGCAT ACTGGATCACGTACGGCACTCGGTATATGTCTGGAGAGTGGGCATGGCGCCTCCCCTTCCTGCTGCAGTTGATCC CGGGCTTCATCTTGATGGCGGGTGTCATCGTATTGCCTTTCTCTCCAAGATGGCTTGTCGCGAAAGGAAGGGTAG AGGAGGCTCTCCAGAGTTTGTCGAAATTGCGTCAATTGCCTCCATCCGATAAGCGCGTCAGACAGGAGCTTCTGG ACATCAAAGCAGAGGTCCGATTCCATCAGGAACTCAACGTAGAAAAGCACCCCAATTTGCAAGGTGGTGGACTCA AGAACGCAATCTTGTTGGATCTGGCATGCTGGGCCGATTGCTTCAAGAAGGGTTGCTGGCGGAGGACGCACATTG GTGTCATGATGATGTTCTTTCAACAGGTGAGTCGCGAAATGCCCCCTCAGAAGTATATCCCGGAAAGCAACTAAC ACCTCGGGGATAGTTCGTTGGAATCAATGCCCTCATTTACTATGCACCTACACTGTTCGAGACTATGGGATTAGA CTACAGCATGCAACTCCTGATGTCGGGTATTGTGAACGTGGGACAGTTGGTGGGCGTGATCACCAGTATCTCAAC CATGGACAAATTCGGTCGACGGGCTCTTCTGCTCTGGGGTGTAGCTATTATGGCAATTTGTCACATTATCGTGGC CATCTTGGTCAGCCTCTACTCCGACAACTGGCCCGCGCACCGCGCCCAGGGTTGGGCCAGTGTCGCTCTTCTACT TGTGTACATGGTCGCTTTTGGTGGCTCATGGGGTCCAGTAGGGTGGGCGCTGCCAGCTGGTAAGTATCTAACCCT AATGAACGGCGGAATGCCACTCATGTCTAACTCTCATCGCAGAGGTCTTTCCTTCTTCTCTCCGTGCCAAGGGTG TGGCCCTCTCAACCTGTTCCAACTGGCTGAACAATTTTATTATTGTGAGTTCACCCGGAGATAACAGCCAGATAG TGCGCAATTCTAATAGAAATATTTAATAGGGCTTGATCACGCCGCCGCTTGTTGAAGATACCGGATACGGTGCTT ACGTATTCTTTGCAGTCTTCTGTTCACTGGCCTTCGTATGGACACTCTTCTTTGTCCCTGAGACCAAGGGCAAGT CTCTGGAGCAGATGGATCAGGTCTTCAAGGATAACTCGAGCGAAGCTGAACAAGCTCGTAGACGTGCTATCGAGG CTGATCTGTTGCGAGAGGAGGAGCAGGCCGTGATTGAGGCCTAA |