Protein ID | Ani_SJS100_1|g4228.t1 |
Gene name | |
Location | scaffold_021:66777..69754 |
Strand | - |
Gene length (bp) | 2977 |
Transcript length (bp) | 1857 |
Coding sequence length (bp) | 1857 |
Protein length (aa) | 619 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF10544 | T5orf172 | T5orf172 domain | 1.2E-16 | 76 | 174 |
PF13455 | MUG113 | Meiotically up-regulated gene 113 | 2.6E-07 | 91 | 173 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 11 | 0.45 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 326 | 348 | 22 |
2 | 361 | 383 | 22 |
3 | 403 | 425 | 22 |
4 | 438 | 460 | 22 |
5 | 517 | 539 | 22 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ani_SJS100_1|g4228.t1 MAGSPSSPPRSREVPRFSGGPVGDAISPGVKDVFQDAVEEQVQSPAEDDKPGVTTEAILSSMHNIIRGSYNENNK GYAYVYRDSKDECQRFKIGSTDRPEVRKKELDKQCKYVDWELVQDPKLPIWEYKRLERLAHSELQNLRCNFICPG DGIKHREYFYGSNATASEVLERWSRWLVEHEPYDEKSKLKPFWSERLEWFTGNKTASFYFNCKKADCSRRDSIPA ACQECLRIGWKVWTEPTTLDKVRYYCPCYAKAIWERTPALPTCFLFILCGRLIGPMILAHFHDYGLRGEVIVTDV VICIGDLVQSAPSMSDEHPNGFGQPFFIVTWAEFGLAIIFMIARGVAASKLIHNVTMDCYLAIVTFVLGAASMAM ITVGATYGLGRPQDMLSFNQSKMALLYGWVNQLIALVAIGLGKLTIVAFLEQVQGYQTKARSIFLWSVAGSNLVL NCIAAILMMLQCSPRRMLWEAYAKGNCPYRSRIQIFGYIQGPWSAFCDFALALYPVSFLARVHAFSIATRIGLCV LMGFGVVAGACAIVKTVQLTVLTKIHDPSQQIGTVIVWNQTEMWVVFIVSCIPPTKVFFKHIYRRSSIRLGSFVD QMRPREQEIKPNESFQSS* |
Coding | >Ani_SJS100_1|g4228.t1 ATGGCCGGCTCTCCCTCTTCACCACCCCGATCACGTGAGGTTCCAAGATTCAGTGGTGGCCCTGTGGGCGATGCC ATTTCGCCAGGGGTGAAGGATGTATTTCAGGATGCTGTGGAGGAGCAGGTCCAGAGTCCTGCAGAAGATGACAAG CCAGGGGTTACGACAGAGGCTATTCTTTCCAGCATGCACAACATCATTCGGGGATCTTACAACGAAAATAATAAG GGATACGCTTACGTTTACCGGGACAGTAAGGATGAGTGTCAGCGCTTCAAGATTGGATCGACGGATCGGCCAGAA GTTCGCAAAAAGGAGCTCGACAAACAGTGCAAATACGTGGACTGGGAATTAGTACAGGATCCTAAATTGCCTATC TGGGAGTATAAACGACTAGAAAGACTGGCCCACAGTGAGCTGCAAAATTTGAGATGCAATTTCATATGCCCCGGT GACGGTATCAAGCATCGAGAGTACTTCTATGGCTCAAACGCTACTGCCTCTGAGGTCCTCGAACGCTGGTCGCGG TGGTTAGTAGAACACGAGCCATATGACGAGAAAAGCAAGCTGAAGCCTTTCTGGTCCGAGCGCCTCGAATGGTTC ACCGGTAACAAAACGGCATCGTTCTATTTCAACTGCAAAAAGGCTGATTGCTCACGGCGAGACTCCATTCCTGCT GCTTGCCAGGAATGTCTTCGGATAGGATGGAAAGTGTGGACAGAACCAACGACGCTCGACAAGGTTAGGTACTAC TGTCCTTGTTATGCCAAGGCCATATGGGAGCGCACACCCGCACTGCCTACCTGTTTCCTCTTCATTTTGTGCGGC AGATTGATTGGGCCAATGATCCTTGCTCATTTTCATGATTACGGACTTCGTGGAGAGGTCATCGTGACTGACGTT GTTATATGCATAGGGGATCTGGTACAAAGCGCACCGTCAATGAGCGACGAGCATCCGAATGGCTTTGGCCAGCCA TTCTTCATTGTGACATGGGCCGAGTTTGGACTGGCGATCATCTTCATGATCGCTCGAGGCGTTGCTGCTTCCAAA TTGATTCATAACGTGACAATGGACTGCTATTTGGCCATAGTCACATTTGTTTTGGGAGCTGCAAGCATGGCGATG ATTACAGTGGGGGCTACATACGGGCTCGGCCGACCGCAGGACATGCTAAGTTTCAATCAGAGCAAGATGGCACTA CTCTATGGCTGGGTCAACCAGCTTATTGCCCTCGTTGCGATTGGTTTAGGGAAGCTTACCATTGTCGCATTTCTC GAACAAGTCCAAGGCTATCAGACCAAAGCCAGAAGCATCTTTCTCTGGTCTGTGGCGGGCAGCAACCTCGTCCTG AATTGTATCGCTGCCATCCTGATGATGCTTCAATGCTCGCCGAGGAGGATGCTGTGGGAGGCATATGCTAAGGGA AATTGTCCTTATCGCAGCCGTATACAGATATTTGGCTATATTCAAGGGCCTTGGTCTGCTTTTTGCGACTTTGCA CTAGCATTATACCCAGTTTCTTTCCTTGCACGGGTCCACGCTTTCTCGATAGCGACCCGGATCGGTCTTTGCGTA CTGATGGGATTTGGCGTCGTAGCAGGGGCATGTGCAATAGTAAAAACAGTTCAATTGACTGTTCTCACCAAAATC CACGACCCGAGTCAACAGATTGGGACTGTCATTGTTTGGAATCAAACCGAAATGTGGGTCGTATTCATTGTCAGC TGTATACCGCCGACGAAAGTGTTCTTCAAGCATATATATCGCCGGAGCTCTATCCGGCTAGGTTCATTTGTCGAC CAAATGCGGCCCCGGGAACAGGAGATAAAGCCGAATGAGTCGTTTCAGTCTAGTTGA |
Transcript | >Ani_SJS100_1|g4228.t1 ATGGCCGGCTCTCCCTCTTCACCACCCCGATCACGTGAGGTTCCAAGATTCAGTGGTGGCCCTGTGGGCGATGCC ATTTCGCCAGGGGTGAAGGATGTATTTCAGGATGCTGTGGAGGAGCAGGTCCAGAGTCCTGCAGAAGATGACAAG CCAGGGGTTACGACAGAGGCTATTCTTTCCAGCATGCACAACATCATTCGGGGATCTTACAACGAAAATAATAAG GGATACGCTTACGTTTACCGGGACAGTAAGGATGAGTGTCAGCGCTTCAAGATTGGATCGACGGATCGGCCAGAA GTTCGCAAAAAGGAGCTCGACAAACAGTGCAAATACGTGGACTGGGAATTAGTACAGGATCCTAAATTGCCTATC TGGGAGTATAAACGACTAGAAAGACTGGCCCACAGTGAGCTGCAAAATTTGAGATGCAATTTCATATGCCCCGGT GACGGTATCAAGCATCGAGAGTACTTCTATGGCTCAAACGCTACTGCCTCTGAGGTCCTCGAACGCTGGTCGCGG TGGTTAGTAGAACACGAGCCATATGACGAGAAAAGCAAGCTGAAGCCTTTCTGGTCCGAGCGCCTCGAATGGTTC ACCGGTAACAAAACGGCATCGTTCTATTTCAACTGCAAAAAGGCTGATTGCTCACGGCGAGACTCCATTCCTGCT GCTTGCCAGGAATGTCTTCGGATAGGATGGAAAGTGTGGACAGAACCAACGACGCTCGACAAGGTTAGGTACTAC TGTCCTTGTTATGCCAAGGCCATATGGGAGCGCACACCCGCACTGCCTACCTGTTTCCTCTTCATTTTGTGCGGC AGATTGATTGGGCCAATGATCCTTGCTCATTTTCATGATTACGGACTTCGTGGAGAGGTCATCGTGACTGACGTT GTTATATGCATAGGGGATCTGGTACAAAGCGCACCGTCAATGAGCGACGAGCATCCGAATGGCTTTGGCCAGCCA TTCTTCATTGTGACATGGGCCGAGTTTGGACTGGCGATCATCTTCATGATCGCTCGAGGCGTTGCTGCTTCCAAA TTGATTCATAACGTGACAATGGACTGCTATTTGGCCATAGTCACATTTGTTTTGGGAGCTGCAAGCATGGCGATG ATTACAGTGGGGGCTACATACGGGCTCGGCCGACCGCAGGACATGCTAAGTTTCAATCAGAGCAAGATGGCACTA CTCTATGGCTGGGTCAACCAGCTTATTGCCCTCGTTGCGATTGGTTTAGGGAAGCTTACCATTGTCGCATTTCTC GAACAAGTCCAAGGCTATCAGACCAAAGCCAGAAGCATCTTTCTCTGGTCTGTGGCGGGCAGCAACCTCGTCCTG AATTGTATCGCTGCCATCCTGATGATGCTTCAATGCTCGCCGAGGAGGATGCTGTGGGAGGCATATGCTAAGGGA AATTGTCCTTATCGCAGCCGTATACAGATATTTGGCTATATTCAAGGGCCTTGGTCTGCTTTTTGCGACTTTGCA CTAGCATTATACCCAGTTTCTTTCCTTGCACGGGTCCACGCTTTCTCGATAGCGACCCGGATCGGTCTTTGCGTA CTGATGGGATTTGGCGTCGTAGCAGGGGCATGTGCAATAGTAAAAACAGTTCAATTGACTGTTCTCACCAAAATC CACGACCCGAGTCAACAGATTGGGACTGTCATTGTTTGGAATCAAACCGAAATGTGGGTCGTATTCATTGTCAGC TGTATACCGCCGACGAAAGTGTTCTTCAAGCATATATATCGCCGGAGCTCTATCCGGCTAGGTTCATTTGTCGAC CAAATGCGGCCCCGGGAACAGGAGATAAAGCCGAATGAGTCGTTTCAGTCTAGTTGA |
Gene | >Ani_SJS100_1|g4228.t1 ATGGCCGGCTCTCCCTCTTCACCACCCCGATCACGTGAGGTTCCAAGATTCAGTGGTGGCCCTGTGGGCGATGCC ATTTCGCCAGGGGTGAAGGATGTATTTCAGGATGCTGTGGAGGAGCAGGTCCAGAGTCCTGCAGAAGATGACAAG CCAGGGGTTACGACAGAGGCTATTCTTTCCAGCATGCACAACATCATTCGGGGATCTTACAACGAAAATAATAAG GGATACGCTTACGTTTACCGGGACAGTAAGGATGAGTGTCAGCGCTTCAAGATTGGATCGACGGATCGGCCAGAA GTTCGCAAAAAGGAGCTCGACAAACAGTGCAAATACGTGGACTGGGAATTAGTACAGGATCCTAAATTGCCTATC TGGGAGTATAAACGACTAGAAAGACTGGCCCACAGTGAGCTGCAAAATTTGAGATGCAATTTCATATGCCCCGGT GACGGTATCAAGCATCGAGAGTACTTCTATGGCTCAAACGCTACTGCCTCTGAGGTCCTCGAACGCTGGTCGCGG TGGTTAGTAGAACACGAGCCATATGACGAGAAAAGCAAGCTGAAGCCTTTCTGGTCCGAGCGCCTCGAATGGTTC ACCGGTAACAAAACGGCATCGTTCTATTTCAACTGCAAAAAGGCTGATTGCTCACGGCGAGACTCCATTCCTGCT GCTTGCCAGGAATGTCTTCGGATAGGATGGAAAGTGTGGACAGAACCAACGACGCTCGACAAGGTTAGGTACTAC TGTCCTTGTTATGCCAAGGCCATATGGGAGCGCACACCCGCACTGCCTACCTGTTTCCTCTTCATTTTGTGCGGC AGATTGATTGGGCCAATGATCCTTGCTCATTTTCATGATTACGGACTTCGTGGAGAGGTCATCGTGACTGACGTT GTTATATGCATGTGCGCCTTTCTCTGTCACTATTCCCAAAATAAGGCACTTCAAAAGGCACTTCAGAGGGGATCT GGTACAAAGCGCACCGGTAAGAGGGCTACATCAGCTTCAGGGCAATTCTTTATCTCTCCAGAGGGGCACTCCAGC AGGCATGACCAAGAAGGAACTCCTGCGAAGAAGAGAAAGCGATCATAGCAATTTCGGACAATTCATGACAGGGCA AGTCCGGGGAAGGTCCGTTGCTCTTCGGAATAGGCACGGTGAAGTATACGGTGATTTTCATGACATATCGCTACT ATTGACGTGAATATGCTTTATCCATCATTGCAGAGACTATTCACAAGGAACTAGGTTGTCAATCAAACACTAGAT GGCAATCATGGCAATCTAGTGTGTAGCTCCGAGGTTGTGCTGTGATACCCACCCGCGATGATGTCAACAGGGTTT CCCGACCCACCCGGATGCTTGCAAGGCACAGCTGGGGAGGCTCGACCTTGCACTGTATCTGTAGATCGGGGTTAG TGATATCAGATCTCACCCAAGAGCCAGGAACAGCGATTGCCAAAAGAAACTTCCAGTTATTGTGGAAAAACCCAA AACCCTGGGTGTTGACGTAGGCGGTCCGTCACCTGACAGCCAGCCAACCCAAATTGCAGCTATCTTAACTTTGGA TCCACTGGAAGGTTCATCACAATCCTCATCTTCTTACCATTCTCGATTGACGAGATAGTGGAATTTTGCATTTTG TCGTGGCGGGTGCTCAGGATTGTGTTGTGTTGAGCAATGCCACTTGCCTTTCCACATCAACAAACCCCGACTAGC CGAGCAACTCATGTTGATCTTGGTTGTACCAGAAATGCAGCGACTGCGCCATCGTAACAAATTAGCAAACTCAAC AATTAACAGTCAATGAGCGACGAGCATCCGAATGGCTTTGGCCAGCCATTCTTCATTGTGACATGGGCCGAGTTT GGACTGGCGATCATCTTCATGATCGCTCGAGGCGTTGCTGCTTCCAAATTGATTCATAACGTGACAATGGACTGC TATTTGGCCATAGTCACATTTGTAAGTACCTCTTCCACCTTGTAATATCGCTGCTCATATTGATATGACAGGTTT TGGGAGCTGCAAGCATGGCGATGATTACAGTGGGGGCTACATACGGGCTCGGCCGACCGCAGGACATGCTAAGTT TCAATCAGAGCAAGATGGCACTACTCTATGGCTGGGTCAACCAGCTTATTGCCCTCGTTGCGATTGGTTTAGGGA AGCTTACCATTGTCGCATTTCTCGAACAAGTCCAAGGCTATCAGACCAAAGCCAGAAGCATCTTTCTCTGGTCTG TGGCGGGCAGCAACCTCGTCCTGAATTGTATCGCTGCCATCCTGATGATGCTTCAATGCTCGCCGAGGAGGATGC TGTGGGAGGCATATGCTAAGGGAAATTGTCCTTATCGCAGCCGTATACAGATATTTGGCTATATTCAAGGGCGTG AGTGTGTCCTCTCGCTTCATGGGTTCTTGTCTAACGTTGACAGCTTGGTCTGCTTTTTGCGACTTTGCACTAGCA TTATACCCAGTTTCTTTCCTTGCACGGGTCCACGCTTTCTCGATAGCGACCCGGATCGGTCTTTGCGTACTGATG GGATTTGGCGTCGTGTACTGCACATTTCCTCTTACTGGATGATTTAGTGCTGACGCAGAGTAGAGCAGGGGCATG TGCAATAGTAAAAACAGTTCAATTGACTGTTCTCACCAAAATCCACGACCCGAGTCGTGAGTGACTGCTGTCCAT CAGCTTGCGAGATGAGAGCTAACAGACATTATAGAACAGATTGGGACTGTCATTGTTTGGAATCAGTGAGTAATA CTTGACATCTGTTATACCATCTCTAATAATCAAATATAGAACCGAAATGTGGGTCGTATTCATTGTCAGCTGTAT ACCGCCGACGAAAGTGTTCTTCAAGCATATATATCGCCGGAGCTCTATCCGGCTAGGTTCATTTGTCGACCAAAT GCGGCCCCGGGAACAGGAGATAAAGCCGAATGAGTCGTTTCAGTCTAGTTGA |