© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ani_SJS100_1|g4201.t1 |
| Gene name | |
| Location | scaffold_020:417763..418989 |
| Strand | + |
| Gene length (bp) | 1226 |
| Transcript length (bp) | 1056 |
| Coding sequence length (bp) | 1056 |
| Protein length (aa) | 352 |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 11 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 10 | 32 | 22 |
| 2 | 44 | 66 | 22 |
| 3 | 91 | 113 | 22 |
| 4 | 120 | 142 | 22 |
| 5 | 167 | 189 | 22 |
| 6 | 201 | 223 | 22 |
| 7 | 233 | 255 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS100_1|g4201.t1 MAISPNGARLMVWEIVFAVVTTLMMGLRLWAIRIRRSSIQMHDYFVFIAYLSTCCMEGVCFWAIANGLGAHTDTL TSYEIGVQYQLFISTYVTWTTGTVCCKFSMLALYTSLFPSKRFRYAVWVMYGAVFVYYVFFLSFFMTQCHPISYG WNPVPGGYCKSVMLEEILSIALNMGLDTVIALLPMPLLWKVQMPFRNKLTISVMFAMGLFVVGVMAWRMAITLMP STQTDFVHGLYLVGLVSFMELWFSMIIVSLPTVAPLFRRYVEPFYKTLTGRSNSNTNPRRLKEAQHTIGSEPGQA KRSKSWQLEDGYLELDDTESGSKGHAEAWSGMSRASLIDASENTPSHAITK* |
| Coding | >Ani_SJS100_1|g4201.t1 ATGGCTATTAGTCCAAACGGGGCCCGGCTTATGGTCTGGGAGATTGTCTTCGCGGTGGTGACCACCCTCATGATG GGACTGAGGCTGTGGGCCATTCGCATCAGACGGTCGTCCATTCAAATGCATGACTATTTTGTCTTTATTGCCTAC TTGAGCACCTGTTGCATGGAAGGAGTGTGCTTTTGGGCCATCGCCAACGGTCTGGGCGCACACACGGACACACTC ACGAGCTACGAAATTGGGGTTCAATACCAGCTTTTCATCAGCACCTACGTAACGTGGACCACGGGAACCGTATGC TGCAAATTCTCTATGCTCGCCCTCTACACCTCTCTCTTCCCTTCGAAACGATTCCGGTATGCAGTCTGGGTCATG TACGGCGCTGTATTCGTCTACTACGTCTTCTTCCTATCGTTCTTCATGACCCAATGTCATCCAATCTCCTATGGC TGGAATCCTGTGCCGGGCGGGTACTGCAAGTCCGTAATGTTGGAGGAGATCCTCTCAATCGCCTTGAACATGGGT CTTGATACTGTAATTGCACTCCTCCCGATGCCACTGCTCTGGAAGGTACAAATGCCTTTCAGGAACAAACTGACT ATTAGCGTCATGTTCGCCATGGGTCTCTTTGTTGTCGGAGTCATGGCCTGGCGTATGGCCATCACGCTCATGCCT TCGACCCAGACTGACTTTGTCCACGGTCTGTACCTCGTCGGACTAGTTAGTTTTATGGAACTCTGGTTCAGCATG ATCATCGTCTCGCTGCCGACAGTGGCGCCTTTGTTCCGGCGCTACGTCGAGCCGTTCTACAAGACGCTCACTGGG CGATCAAATTCCAATACCAATCCACGACGCCTAAAGGAAGCTCAACACACGATAGGCAGTGAGCCCGGACAGGCG AAGCGTTCGAAGAGTTGGCAGCTCGAAGACGGGTATTTGGAATTGGATGACACGGAGTCGGGGTCGAAGGGCCAT GCGGAGGCGTGGAGTGGAATGTCTCGGGCCTCGTTGATTGATGCGAGTGAAAACACCCCCTCGCATGCTATTACA AAATGA |
| Transcript | >Ani_SJS100_1|g4201.t1 ATGGCTATTAGTCCAAACGGGGCCCGGCTTATGGTCTGGGAGATTGTCTTCGCGGTGGTGACCACCCTCATGATG GGACTGAGGCTGTGGGCCATTCGCATCAGACGGTCGTCCATTCAAATGCATGACTATTTTGTCTTTATTGCCTAC TTGAGCACCTGTTGCATGGAAGGAGTGTGCTTTTGGGCCATCGCCAACGGTCTGGGCGCACACACGGACACACTC ACGAGCTACGAAATTGGGGTTCAATACCAGCTTTTCATCAGCACCTACGTAACGTGGACCACGGGAACCGTATGC TGCAAATTCTCTATGCTCGCCCTCTACACCTCTCTCTTCCCTTCGAAACGATTCCGGTATGCAGTCTGGGTCATG TACGGCGCTGTATTCGTCTACTACGTCTTCTTCCTATCGTTCTTCATGACCCAATGTCATCCAATCTCCTATGGC TGGAATCCTGTGCCGGGCGGGTACTGCAAGTCCGTAATGTTGGAGGAGATCCTCTCAATCGCCTTGAACATGGGT CTTGATACTGTAATTGCACTCCTCCCGATGCCACTGCTCTGGAAGGTACAAATGCCTTTCAGGAACAAACTGACT ATTAGCGTCATGTTCGCCATGGGTCTCTTTGTTGTCGGAGTCATGGCCTGGCGTATGGCCATCACGCTCATGCCT TCGACCCAGACTGACTTTGTCCACGGTCTGTACCTCGTCGGACTAGTTAGTTTTATGGAACTCTGGTTCAGCATG ATCATCGTCTCGCTGCCGACAGTGGCGCCTTTGTTCCGGCGCTACGTCGAGCCGTTCTACAAGACGCTCACTGGG CGATCAAATTCCAATACCAATCCACGACGCCTAAAGGAAGCTCAACACACGATAGGCAGTGAGCCCGGACAGGCG AAGCGTTCGAAGAGTTGGCAGCTCGAAGACGGGTATTTGGAATTGGATGACACGGAGTCGGGGTCGAAGGGCCAT GCGGAGGCGTGGAGTGGAATGTCTCGGGCCTCGTTGATTGATGCGAGTGAAAACACCCCCTCGCATGCTATTACA AAATGA |
| Gene | >Ani_SJS100_1|g4201.t1 ATGGCTATTAGTCCAAACGGGGCCCGGCTTATGGTCTGGGAGATTGTCTTCGCGGTGGTGACCACCCTCATGATG GGACTGAGGCTGTGGGCCATTCGCATCAGACGGTCGTCCATTCAAATGCATGACTATTTTGTCTTTATTGCCTAC GTGTGTTTCTCTTCAGCCTTTCTCCCAGATATTATCTGACGTTCTCACAGTTGAGCACCTGTTGCATGGAAGGAG TGTGCTTTTGGGCCATCGCCAACGGTCTGGGCGCACACACGGACACACTCACGAGCTACGAAATTGGGGTTCAAT ACCAGGTAAGCCAGTCTCAATTTAACACATTACAGCATCATAGCCTTCTAAGCGATATGTCGCAGCTTTTCATCA GCACCTACGTAACGTGGACCACGGGAACCGTATGCTGCAAATTCTCTATGCTCGCCCTCTACACCTCTCTCTTCC CTTCGAAACGATTCCGGTATGCAGTCTGGGTCATGTACGGCGCTGTATTCGTCTACTACGTCTTCTTCCTATCGT TCTTCATGACCCAATGTCATCCAATCTCCTATGGCTGGAATCCTGTGCCGGGCGGGTACTGCAAGTCCGTAATGT TGGAGGAGATCCTCTCAATCGCCTTGAACATGGGTCTTGATACTGTAATTGCACTCCTCCCGATGCCACTGCTCT GGAAGGTACAAATGCCTTTCAGGAACAAACTGACTATTAGCGTCATGTTCGCCATGGGTCTCTTGTACGGATATT CCCTTTCTCTGCTACTTCATCTGGTATACAACATACTAACACGCCGCAGTGTTGTCGGAGTCATGGCCTGGCGTA TGGCCATCACGCTCATGCCTTCGACCCAGACTGACTTTGTCCACGGTCTGTACCTCGTCGGACTAGTTAGTTTTA TGGAACTCTGGTTCAGCATGATCATCGTCTCGCTGCCGACAGTGGCGCCTTTGTTCCGGCGCTACGTCGAGCCGT TCTACAAGACGCTCACTGGGCGATCAAATTCCAATACCAATCCACGACGCCTAAAGGAAGCTCAACACACGATAG GCAGTGAGCCCGGACAGGCGAAGCGTTCGAAGAGTTGGCAGCTCGAAGACGGGTATTTGGAATTGGATGACACGG AGTCGGGGTCGAAGGGCCATGCGGAGGCGTGGAGTGGAATGTCTCGGGCCTCGTTGATTGATGCGAGTGAAAACA CCCCCTCGCATGCTATTACAAAATGA |