© 2022 - Robin Ohm - Utrecht University - The Netherlands
Built with Python Django and Wagtail
| Protein ID | Ani_SJS100_1|g416.t1 |
| Gene name | |
| Location | scaffold_001:1372441..1373014 |
| Strand | + |
| Gene length (bp) | 573 |
| Transcript length (bp) | 285 |
| Coding sequence length (bp) | 285 |
| Protein length (aa) | 95 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF04418 | DUF543 | Domain of unknown function (DUF543) | 3.6E-29 | 15 | 82 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0061617 | MICOS complex | Yes |
| GO:0005743 | mitochondrial inner membrane | Yes |
| GO:0031966 | mitochondrial membrane | No |
| GO:0098796 | membrane protein complex | No |
| GO:0110165 | cellular anatomical entity | No |
| GO:0098798 | mitochondrial protein-containing complex | No |
| GO:0032991 | protein-containing complex | No |
| GO:0031090 | organelle membrane | No |
| GO:0098800 | inner mitochondrial membrane protein complex | No |
| GO:0019866 | organelle inner membrane | No |
| GO:0005575 | cellular_component | No |
| GO:0016020 | membrane | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 69 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 33 | 55 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS100_1|g416.t1 MADSNESQPVAPVPRSTKPVSEALLNEKWDRAISSLIIRSSLGLSFGVVFSVLLFKRRAWPAWVGLGFGAGRAWE EADASFRRGDSPVRDALRR* |
| Coding | >Ani_SJS100_1|g416.t1 ATGGCCGACTCCAACGAATCCCAGCCGGTCGCACCGGTCCCACGCTCCACCAAGCCCGTCAGCGAGGCCCTGCTG AACGAAAAGTGGGATCGCGCCATCTCCTCCCTCATTATCCGCTCTTCCCTCGGTCTCTCCTTCGGTGTTGTCTTC TCCGTGCTCCTCTTCAAGCGGAGAGCTTGGCCCGCGTGGGTTGGTCTCGGCTTCGGTGCCGGACGTGCTTGGGAG GAAGCTGACGCCTCCTTCCGTCGGGGCGACTCTCCGGTCAGAGATGCCCTGCGTAGGTAG |
| Transcript | >Ani_SJS100_1|g416.t1 ATGGCCGACTCCAACGAATCCCAGCCGGTCGCACCGGTCCCACGCTCCACCAAGCCCGTCAGCGAGGCCCTGCTG AACGAAAAGTGGGATCGCGCCATCTCCTCCCTCATTATCCGCTCTTCCCTCGGTCTCTCCTTCGGTGTTGTCTTC TCCGTGCTCCTCTTCAAGCGGAGAGCTTGGCCCGCGTGGGTTGGTCTCGGCTTCGGTGCCGGACGTGCTTGGGAG GAAGCTGACGCCTCCTTCCGTCGGGGCGACTCTCCGGTCAGAGATGCCCTGCGTAGGTAG |
| Gene | >Ani_SJS100_1|g416.t1 ATGGCCGACTCCAACGAATCCCAGCCGGTCGCACCGGTCCCACGCTCCACCAAGCCCGTCAGCGAGGCCCTGCTG AACGAAAAGGTACTTACACCACCATCTGAAGTTCCCATCGATCGCTTTGTTCCGTCTGGATGTTGAATGGTCTTG TTGGTTGGGCCTGTCATGGAGCCTCCGGACCTCTCCGCCCTTGAACAACCCCATCCGCAAATTGCAACTGCGGGA CACACGCACATATGTCATCGGGAAGTGTAGTCAGTAGTGCTCGGGCTAATACGGAACTTCTCAATGCACAGTGGG ATCGCGCCATCTCCTCCCTCATTATCCGCTCTTCCCTCGGTCTCTCCTTCGGTGTTGTCTTCTCCGTGCTCCTCT TCAAGCGGAGAGCTTGGCCCGCGTGGGTTGGTCTCGGCTTCGGTGCCGGACGTGCTTGGGAGGAAGCTGACGGTA CGTTCATGCAACTGCATCCAAGATCCCTTTTCTCGCACTACGGGAAGGAATTGTCCTAGCTAACTTTCTGCAGCC TCCTTCCGTCGGGGCGACTCTCCGGTCAGAGATGCCCTGCGTAGGTAG |