© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ani_SJS100_1|g4153.t1 |
| Gene name | |
| Location | scaffold_020:265895..267404 |
| Strand | + |
| Gene length (bp) | 1509 |
| Transcript length (bp) | 1356 |
| Coding sequence length (bp) | 1356 |
| Protein length (aa) | 452 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF03099 | BPL_LplA_LipB | Biotin/lipoate A/B protein ligase family | 4.3E-05 | 129 | 222 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0036211 | protein modification process | Yes |
| GO:0006807 | nitrogen compound metabolic process | No |
| GO:0008150 | biological_process | No |
| GO:0044238 | primary metabolic process | No |
| GO:0019538 | protein metabolic process | No |
| GO:0008152 | metabolic process | No |
| GO:0043170 | macromolecule metabolic process | No |
| GO:0071704 | organic substance metabolic process | No |
| GO:0043412 | macromolecule modification | No |
| GO:1901564 | organonitrogen compound metabolic process | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 25 | 0.45 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS100_1|g4153.t1 MRLYSSRATCWLSSLRVPHPRSSPRSNAVRWNSSFSADQFAQLASRQSSQHQIYQSLSTDPYVNLSIEHFLLEHA PADSNILFLYINRPCVVIGRNQNPWLETNLRVLHNDRGTAEHGIHSYNDTEDALYVRRRSGGGAVFHDEGNLNYS VISPRPTFTRNKHAEMVVRALHRVGATTTSVNDRHDIVMSLDEGQSQPRKISGSAFKLTRHRALHHGTCLLDSPN INTLGSFLRSPARDYIKAKGVESVRSPVANVSSVFADASIPFGIQDVIANIMTEFAELYQTSPDAVRRAQRAYVH DAELYAGDDWVVGAVGEAQGHEEPEIKKGIDELRSLEWKYTQTPQFIFSTYPVEEDPRERPALPSSLPSSTRVFL RLKHGAILESHISVSSDSSVGSEQAARLQEALKGRKLHEIRPAHWKEVLYEQLGAEEDAATVEELARFVATKLGW V* |
| Coding | >Ani_SJS100_1|g4153.t1 ATGCGTCTCTACTCCTCTCGAGCAACATGCTGGCTATCGTCGCTCCGAGTTCCCCATCCCAGATCCAGCCCGCGT TCTAATGCCGTGCGGTGGAATTCCTCATTTTCCGCCGACCAATTCGCCCAGCTCGCCAGTCGCCAGTCCTCCCAG CATCAAATCTACCAATCCCTCTCCACCGATCCCTACGTGAACCTCTCCATCGAACACTTTCTGCTGGAGCATGCG CCGGCAGACTCGAATATCCTCTTCCTATATATCAACCGGCCGTGCGTGGTAATCGGGCGTAATCAGAACCCATGG CTCGAGACCAACCTCCGAGTGCTACATAATGACCGCGGAACCGCGGAGCACGGAATCCACTCCTACAATGATACC GAAGATGCGCTCTACGTCCGACGACGGTCTGGCGGTGGTGCCGTCTTCCACGATGAGGGAAACCTCAATTACAGC GTGATCTCCCCGCGACCGACATTCACACGCAACAAACATGCGGAGATGGTCGTGCGCGCATTGCACCGTGTCGGA GCAACCACTACCAGCGTCAATGACCGTCATGACATCGTCATGTCCCTCGATGAAGGGCAATCTCAACCTCGAAAG ATCTCCGGCTCAGCATTCAAGCTTACGCGACACCGTGCGCTTCACCACGGCACCTGTCTCCTCGATTCGCCCAAC ATCAACACCCTCGGTTCATTCCTACGGTCGCCCGCACGGGACTACATCAAGGCCAAAGGCGTGGAAAGTGTGCGA TCTCCGGTCGCCAATGTGTCGTCCGTGTTCGCCGATGCCTCCATCCCATTTGGAATCCAAGACGTGATCGCCAAT ATCATGACGGAGTTTGCAGAGCTATACCAGACCAGCCCAGATGCTGTGCGCCGCGCGCAGCGTGCCTACGTCCAC GACGCAGAGTTATATGCAGGAGACGACTGGGTTGTCGGAGCTGTAGGAGAAGCCCAAGGCCACGAAGAGCCCGAG ATCAAGAAAGGAATCGACGAATTACGATCGCTGGAATGGAAATACACTCAAACACCCCAATTCATTTTCTCGACT TACCCCGTGGAAGAGGATCCTCGCGAACGCCCCGCCCTTCCATCATCCTTACCTTCTTCTACACGTGTGTTCCTC CGCCTCAAACACGGGGCAATCCTGGAGAGCCACATCTCCGTCTCGTCCGATTCCTCCGTCGGCTCGGAGCAAGCT GCCCGGCTGCAGGAGGCACTCAAGGGGCGTAAGCTTCACGAGATCCGACCGGCCCACTGGAAGGAAGTTCTATAC GAACAGTTGGGGGCGGAAGAGGATGCAGCTACTGTAGAGGAACTCGCTAGGTTTGTTGCGACTAAGCTTGGGTGG GTCTAG |
| Transcript | >Ani_SJS100_1|g4153.t1 ATGCGTCTCTACTCCTCTCGAGCAACATGCTGGCTATCGTCGCTCCGAGTTCCCCATCCCAGATCCAGCCCGCGT TCTAATGCCGTGCGGTGGAATTCCTCATTTTCCGCCGACCAATTCGCCCAGCTCGCCAGTCGCCAGTCCTCCCAG CATCAAATCTACCAATCCCTCTCCACCGATCCCTACGTGAACCTCTCCATCGAACACTTTCTGCTGGAGCATGCG CCGGCAGACTCGAATATCCTCTTCCTATATATCAACCGGCCGTGCGTGGTAATCGGGCGTAATCAGAACCCATGG CTCGAGACCAACCTCCGAGTGCTACATAATGACCGCGGAACCGCGGAGCACGGAATCCACTCCTACAATGATACC GAAGATGCGCTCTACGTCCGACGACGGTCTGGCGGTGGTGCCGTCTTCCACGATGAGGGAAACCTCAATTACAGC GTGATCTCCCCGCGACCGACATTCACACGCAACAAACATGCGGAGATGGTCGTGCGCGCATTGCACCGTGTCGGA GCAACCACTACCAGCGTCAATGACCGTCATGACATCGTCATGTCCCTCGATGAAGGGCAATCTCAACCTCGAAAG ATCTCCGGCTCAGCATTCAAGCTTACGCGACACCGTGCGCTTCACCACGGCACCTGTCTCCTCGATTCGCCCAAC ATCAACACCCTCGGTTCATTCCTACGGTCGCCCGCACGGGACTACATCAAGGCCAAAGGCGTGGAAAGTGTGCGA TCTCCGGTCGCCAATGTGTCGTCCGTGTTCGCCGATGCCTCCATCCCATTTGGAATCCAAGACGTGATCGCCAAT ATCATGACGGAGTTTGCAGAGCTATACCAGACCAGCCCAGATGCTGTGCGCCGCGCGCAGCGTGCCTACGTCCAC GACGCAGAGTTATATGCAGGAGACGACTGGGTTGTCGGAGCTGTAGGAGAAGCCCAAGGCCACGAAGAGCCCGAG ATCAAGAAAGGAATCGACGAATTACGATCGCTGGAATGGAAATACACTCAAACACCCCAATTCATTTTCTCGACT TACCCCGTGGAAGAGGATCCTCGCGAACGCCCCGCCCTTCCATCATCCTTACCTTCTTCTACACGTGTGTTCCTC CGCCTCAAACACGGGGCAATCCTGGAGAGCCACATCTCCGTCTCGTCCGATTCCTCCGTCGGCTCGGAGCAAGCT GCCCGGCTGCAGGAGGCACTCAAGGGGCGTAAGCTTCACGAGATCCGACCGGCCCACTGGAAGGAAGTTCTATAC GAACAGTTGGGGGCGGAAGAGGATGCAGCTACTGTAGAGGAACTCGCTAGGTTTGTTGCGACTAAGCTTGGGTGG GTCTAG |
| Gene | >Ani_SJS100_1|g4153.t1 ATGCGTCTCTACTCCTCTCGAGCAACATGCTGGCTATCGTCGCTCCGAGTTCCCCATCCCAGATCCAGCCCGCGT TCTAATGCCGTGCGGTGGAATTCCTCATTTTCCGCCGACCAATTCGCCCAGCTCGCCAGTCGCCAGTCCTCCCAG CATCAAATCTACCAATCCCTCTCCACCGATCCCTACGTGAACCTCTCCATCGAACACTTTCTGCTGGAGCATGCG CCGGCAGACTCGAATATCCTCTTCCTATATATCAACCGGCCGTGCGTGGTAATCGGGCGTAATCAGAACCCATGG CTCGAGACCAACCTCCGAGTGCTACATAATGACCGCGGAACCGCGGAGCACGGAATCCACTCCTACAATGATACC GAAGATGCGCTCTACGTCCGACGACGGTCTGGCGGTGGTGCCGTCTTCCACGATGAGGGAAACCTCAATTACAGC GTGATCTCCCCGCGACCGACATTCACACGCAACAAACATGCGGAGATGGTCGTGCGCGCATTGCACCGTGTCGGA GCAACCACTACCAGCGTCAATGACCGTCATGACATCGTCATGTCCCTCGATGAAGGGCAATCTCAACCTCGAAAG ATCTCCGGCTCAGCATTCAAGCTTACGCGACACCGTGCGCTTCACCACGGCACCTGTCTCCTCGATTCGCCCAAC ATCAACACCCTCGGTTCATTCCTACGGTCGCCCGCACGGGACTACATCAAGGCCAAAGGCGTGGAAAGTGTGCGA TCTCCGGTCGCCAATGTGTCGTCCGTGTTCGCCGATGCCTCCATCCCATTTGGAATCCAAGACGTGATCGCCAAT ATCATGACGGAGTTTGCAGAGCTATACCAGACCAGCCCAGATGCTGTGCGCCGCGCGCAGCGTGCCTACGTCCAC GACGCAGAGTTATATGCAGGAGACGACTGGGTTGTCGGAGCTGTAGGAGAAGCCCAAGGCCACGAAGAGCCCGAG ATCAAGAAAGGAATCGACGAATTACGAGTGAGTTGCTGCTGGAAATCCGACGAGTCGAAGGCCAAATAACCGTAA ACTAACACAGTATTGAAAATTTGCAACAGTCGCTGGAATGGAAATACACTCAAACACCCCAATTCATTTTCTCGA CTTACCCCGTGGAAGAGGATCCTCGCGAACGCCCCGCCCTTCCATCATCCTTACCTTCTTCTGTAAGACGGCGCT TTCCCCCTCTTGGCATCAGTAAGCAAAAATAATCTATACTAACAACCTAATCAAACATCACAGACACGTGTGTTC CTCCGCCTCAAACACGGGGCAATCCTGGAGAGCCACATCTCCGTCTCGTCCGATTCCTCCGTCGGCTCGGAGCAA GCTGCCCGGCTGCAGGAGGCACTCAAGGGGCGTAAGCTTCACGAGATCCGACCGGCCCACTGGAAGGAAGTTCTA TACGAACAGTTGGGGGCGGAAGAGGATGCAGCTACTGTAGAGGAACTCGCTAGGTTTGTTGCGACTAAGCTTGGG TGGGTCTAG |