Protein ID | Ani_SJS100_1|g4133.t1 |
Gene name | |
Location | scaffold_020:204832..206640 |
Strand | + |
Gene length (bp) | 1808 |
Transcript length (bp) | 1587 |
Coding sequence length (bp) | 1587 |
Protein length (aa) | 529 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF05147 | LANC_like | Lanthionine synthetase C-like protein | 5.2E-20 | 166 | 409 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 54 | 0.45 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ani_SJS100_1|g4133.t1 MSTADLPQYYPNNLIPLDINKETLKSALKELQVAVNRGATLLQEACPPQSEWGKPYNTGLYVGFPGIALAFLRLD HQVKAFSNKEVGLPLDFRRLASEQIIPHGPDIPLLPERVAPFGSPSVLVGPLMRILAAAQSGASMSEADIECLRS VVQVAIGNDYMLPHGDGMMGTDEVLYGRAGLLWAVLSVRAHKYDEGATGLLTSIFESVPDLVDAIIKGGLQGRDD YVEEYGERGALPLMWHWHEDRYGLGAVHGMSGILAALLACDPEELNDGASRNYLPLIAETITGLCKICIAHNGHL PTNLPNRGPSSKRTSPLVQICHGSPGILTLMASARRNKPLITGFWQPEWDVAIRLASERVWEEGLLSKGGGICHG ITGNAWPLLLLHDSFEYDKEEMQAARERYMEREQITSATVLDTGLTGDYFLSRALALMLHARETPPYHSSDTPTS NIYRLPDRPFSLTEGLAGIVCAWSDTCVSVQMRLQSMLLREKWPHSSASLKTDPTFQELESLRLGIPTLAYHRAA ALP* |
Coding | >Ani_SJS100_1|g4133.t1 ATGTCCACTGCAGACTTACCCCAGTATTATCCAAACAATTTGATACCGCTAGACATAAATAAGGAGACCCTCAAA AGCGCACTCAAGGAGCTGCAAGTTGCAGTGAACCGTGGTGCAACATTGCTACAGGAGGCCTGCCCTCCTCAGAGC GAATGGGGCAAACCCTACAACACGGGTTTATACGTGGGATTTCCAGGGATTGCTCTTGCTTTCCTCCGACTGGAC CATCAGGTTAAAGCGTTCAGCAACAAGGAAGTCGGGCTTCCTCTTGACTTCCGCAGGCTTGCAAGCGAGCAAATT ATACCACATGGACCGGATATTCCACTTTTGCCTGAAAGAGTAGCGCCTTTTGGCTCCCCTAGTGTGCTTGTGGGA CCCTTGATGCGGATTCTCGCAGCCGCCCAATCTGGTGCATCCATGTCTGAAGCTGATATTGAATGTCTCAGAAGT GTCGTACAAGTGGCCATCGGAAATGACTACATGCTACCGCATGGGGATGGGATGATGGGTACGGACGAAGTCTTG TATGGCCGAGCGGGTCTATTGTGGGCTGTATTAAGCGTGCGAGCTCACAAGTATGACGAGGGGGCCACAGGCCTT CTGACGTCCATCTTTGAGTCTGTTCCGGATCTTGTTGATGCGATCATCAAAGGTGGGCTCCAAGGCAGAGACGAC TATGTAGAGGAGTATGGGGAGAGGGGTGCTTTGCCGTTGATGTGGCACTGGCATGAAGATCGGTATGGATTAGGA GCGGTACATGGAATGTCCGGCATACTCGCGGCCCTCCTTGCCTGCGATCCTGAAGAGCTCAACGATGGCGCTTCG CGTAACTATTTGCCCCTGATAGCGGAGACCATCACAGGCCTTTGCAAGATATGCATTGCCCATAACGGTCACCTC CCAACAAACCTTCCCAATCGTGGCCCTTCATCCAAGCGCACCTCACCTCTCGTCCAGATTTGTCATGGTAGTCCC GGCATCTTAACCCTGATGGCGAGCGCCAGACGGAACAAGCCCCTGATCACCGGCTTCTGGCAGCCAGAATGGGAT GTAGCAATTCGCCTGGCAAGCGAACGGGTCTGGGAGGAAGGACTACTTTCTAAAGGTGGCGGAATCTGTCATGGC ATTACAGGTAATGCATGGCCACTGCTGCTTCTTCACGACAGCTTCGAGTATGATAAGGAAGAGATGCAAGCTGCT AGGGAAAGATATATGGAGAGGGAACAGATCACTAGCGCAACAGTATTGGATACCGGGCTCACAGGTGACTACTTC CTGTCGAGAGCGCTGGCGCTGATGTTGCATGCGCGGGAGACGCCTCCGTATCATAGCTCCGACACGCCAACGTCC AACATCTATCGACTGCCCGATCGCCCGTTTTCCCTCACGGAGGGCCTGGCAGGCATTGTCTGCGCGTGGTCGGAC ACATGTGTGTCTGTCCAGATGAGACTGCAAAGTATGCTTCTGCGGGAGAAGTGGCCGCATAGTTCTGCATCTCTG AAGACGGACCCAACATTCCAAGAACTTGAAAGTCTGCGATTGGGAATCCCAACGCTTGCCTATCACAGGGCTGCG GCTTTGCCCTGA |
Transcript | >Ani_SJS100_1|g4133.t1 ATGTCCACTGCAGACTTACCCCAGTATTATCCAAACAATTTGATACCGCTAGACATAAATAAGGAGACCCTCAAA AGCGCACTCAAGGAGCTGCAAGTTGCAGTGAACCGTGGTGCAACATTGCTACAGGAGGCCTGCCCTCCTCAGAGC GAATGGGGCAAACCCTACAACACGGGTTTATACGTGGGATTTCCAGGGATTGCTCTTGCTTTCCTCCGACTGGAC CATCAGGTTAAAGCGTTCAGCAACAAGGAAGTCGGGCTTCCTCTTGACTTCCGCAGGCTTGCAAGCGAGCAAATT ATACCACATGGACCGGATATTCCACTTTTGCCTGAAAGAGTAGCGCCTTTTGGCTCCCCTAGTGTGCTTGTGGGA CCCTTGATGCGGATTCTCGCAGCCGCCCAATCTGGTGCATCCATGTCTGAAGCTGATATTGAATGTCTCAGAAGT GTCGTACAAGTGGCCATCGGAAATGACTACATGCTACCGCATGGGGATGGGATGATGGGTACGGACGAAGTCTTG TATGGCCGAGCGGGTCTATTGTGGGCTGTATTAAGCGTGCGAGCTCACAAGTATGACGAGGGGGCCACAGGCCTT CTGACGTCCATCTTTGAGTCTGTTCCGGATCTTGTTGATGCGATCATCAAAGGTGGGCTCCAAGGCAGAGACGAC TATGTAGAGGAGTATGGGGAGAGGGGTGCTTTGCCGTTGATGTGGCACTGGCATGAAGATCGGTATGGATTAGGA GCGGTACATGGAATGTCCGGCATACTCGCGGCCCTCCTTGCCTGCGATCCTGAAGAGCTCAACGATGGCGCTTCG CGTAACTATTTGCCCCTGATAGCGGAGACCATCACAGGCCTTTGCAAGATATGCATTGCCCATAACGGTCACCTC CCAACAAACCTTCCCAATCGTGGCCCTTCATCCAAGCGCACCTCACCTCTCGTCCAGATTTGTCATGGTAGTCCC GGCATCTTAACCCTGATGGCGAGCGCCAGACGGAACAAGCCCCTGATCACCGGCTTCTGGCAGCCAGAATGGGAT GTAGCAATTCGCCTGGCAAGCGAACGGGTCTGGGAGGAAGGACTACTTTCTAAAGGTGGCGGAATCTGTCATGGC ATTACAGGTAATGCATGGCCACTGCTGCTTCTTCACGACAGCTTCGAGTATGATAAGGAAGAGATGCAAGCTGCT AGGGAAAGATATATGGAGAGGGAACAGATCACTAGCGCAACAGTATTGGATACCGGGCTCACAGGTGACTACTTC CTGTCGAGAGCGCTGGCGCTGATGTTGCATGCGCGGGAGACGCCTCCGTATCATAGCTCCGACACGCCAACGTCC AACATCTATCGACTGCCCGATCGCCCGTTTTCCCTCACGGAGGGCCTGGCAGGCATTGTCTGCGCGTGGTCGGAC ACATGTGTGTCTGTCCAGATGAGACTGCAAAGTATGCTTCTGCGGGAGAAGTGGCCGCATAGTTCTGCATCTCTG AAGACGGACCCAACATTCCAAGAACTTGAAAGTCTGCGATTGGGAATCCCAACGCTTGCCTATCACAGGGCTGCG GCTTTGCCCTGA |
Gene | >Ani_SJS100_1|g4133.t1 ATGTCCACTGCAGACTTACCCCAGTATTATCCAAACAATTTGATACCGCTAGACATAAATAAGGAGACCCTCAAA AGCGCACTCAAGGAGCTGCAAGTTGCAGTGAACCGTGGTGCAACATTGCTACAGGAGGCCTGCCCTCCTCAGAGC GAATGGGGCAAACCCTACAACACGGGTTTATACGTGGGATTTCCAGGTATGCGTATAGCTTTCACTCTATGAATC GGTTGAGTGATACGCTACATCACGCACTTTGGCAAGTCTAATCTGATCACCTTTCCCCTCACAGGGATTGCTCTT GCTTTCCTCCGACTGGACCATCAGGTTAAAGCGTTCAGCAACAAGGAAGTCGGGCTTCCTCTTGACTTCCGCAGG CTTGCAAGCGAGCAAATTATACCACATGGACCGGATATTCCACTTTTGCCTGAAAGAGTAGCGCCTTTTGGCTCC CCTAGTGTGCTTGTGGGACCCTTGATGCGGATTCTCGCAGCCGCCCAATCTGGTGCATCCATGTCTGAAGCTGAT ATTGAATGTCTCAGAAGTGTCGTACAAGTGGCCATCGGAAATGACTACATGCTACCGCATGGGGATGGGATGATG GGTACGGACGAAGTCTTGTATGGCCGAGCGGGTCTATTGTGGGCTGTATTAAGCGTGCGAGCTCACAAGTATGAC GAGGGGGCCACAGGCCTTCTGACGTCCATCTTTGAGTCTGTTCCGGATCTTGTTGATGCGATCATCAAAGGTGGG CTCCAAGGCAGAGACGACTATGTAGAGGAGTATGGGGAGAGGGGTGCTTTGCCGTTGATGTGGCACTGGCATGAA GATCGGTATGGATTAGGAGCGTAAGTAATGCCCCCACCATCAGTATGTATGTTGAGCAACAGAACGGCAATCCTG ACATATCTGACTAGGGTACATGGAATGTGTAAGTTACGCTTGTGTAAGAAGATTCACATGATATATGCCGCTGAC AAGCTTTTGTAGCCGGCATACTCGCGGCCCTCCTTGCCTGCGATCCTGAAGAGCTCAACGATGGCGCTTCGCGTA ACTATTTGCCCCTGATAGCGGAGACCATCACAGGCCTTTGCAAGATATGCATTGCCCATAACGGTCACCTCCCAA CAAACCTTCCCAATCGTGGCCCTTCATCCAAGCGCACCTCACCTCTCGTCCAGATTTGTCATGGTAGTCCCGGCA TCTTAACCCTGATGGCGAGCGCCAGACGGAACAAGCCCCTGATCACCGGCTTCTGGCAGCCAGAATGGGATGTAG CAATTCGCCTGGCAAGCGAACGGGTCTGGGAGGAAGGACTACTTTCTAAAGGTGGCGGAATCTGTCATGGCATTA CAGGTAATGCATGGCCACTGCTGCTTCTTCACGACAGCTTCGAGTATGATAAGGAAGAGATGCAAGCTGCTAGGG AAAGATATATGGAGAGGGAACAGATCACTAGCGCAACAGTATTGGATACCGGGCTCACAGGTGACTACTTCCTGT CGAGAGCGCTGGCGCTGATGTTGCATGCGCGGGAGACGCCTCCGTATCATAGCTCCGACACGCCAACGTCCAACA TCTATCGACTGCCCGATCGCCCGTTTTCCCTCACGGAGGGCCTGGCAGGCATTGTCTGCGCGTGGTCGGACACAT GTGTGTCTGTCCAGATGAGACTGCAAAGTATGCTTCTGCGGGAGAAGTGGCCGCATAGTTCTGCATCTCTGAAGA CGGACCCAACATTCCAAGAACTTGAAAGTCTGCGATTGGGAATCCCAACGCTTGCCTATCACAGGGCTGCGGCTT TGCCCTGA |