Fungal Genomics

at Utrecht University

General Properties

Protein IDAni_SJS100_1|g4130.t1
Gene name
Locationscaffold_020:195363..196649
Strand+
Gene length (bp)1286
Transcript length (bp)1137
Coding sequence length (bp)1137
Protein length (aa) 379

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF04034 Ribo_biogen_C Ribosome biogenesis protein, C-terminal 1.6E-50 82 208
PF04068 RLI Possible Fer4-like domain in RNase L inhibitor, RLI 2.6E-11 45 78

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)		 D score
(significance: > 0.45)
No 1 - 46 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ani_SJS100_1|g4130.t1
MVRHKKDNFARGGKKFSSKGPRPPRRDPADPDADDADRPSRPPFKAACWDLGHCDPKRCSGKRLMNFGLMRELQI
GQRFPGVIVSPNAKKIISPADKDLLEQFGAAVVECSWVRVKEVPWSRIGGKCERLLPYLIAANTVNYGKPWRLNC
VEALAACFCICGHEDWARQVLKPFRYGEAFLEINGKLLKRYAACADEDEIKRAEEEWLAKIEREYEESRAAGGAD
IWTVGNTNRRVESDSDDDDEEGSGKENNDEEEEEEEDKDPFAISDDSEEEEQMAAIRAKILNSKSFQNPSASDKP
QPEKIARPEEEGSKSRPLEDSDAESGSAEGSEDEAFDSIINATPVTDRMGIIAAQKKKEKETFSASFSRTVVDAP
KRW*
Coding >Ani_SJS100_1|g4130.t1
ATGGTCCGCCATAAAAAGGACAACTTCGCTCGAGGAGGCAAGAAATTCTCCTCCAAGGGTCCCCGTCCTCCCCGC
CGCGATCCCGCCGACCCTGACGCCGATGATGCCGACCGCCCCTCCAGACCTCCCTTCAAAGCCGCCTGCTGGGAT
CTGGGTCACTGTGATCCCAAGCGCTGCTCAGGAAAGAGGTTGATGAACTTTGGTCTGATGCGCGAGCTGCAGATT
GGTCAGCGATTCCCAGGTGTAATTGTCTCTCCCAACGCAAAGAAAATCATCTCCCCCGCTGACAAAGACCTCCTC
GAACAATTCGGCGCCGCAGTAGTAGAATGTTCCTGGGTGCGAGTGAAGGAAGTTCCCTGGTCGCGGATCGGAGGC
AAATGCGAACGACTCCTACCCTACCTCATCGCCGCCAACACAGTCAACTACGGCAAACCCTGGCGTCTAAACTGC
GTCGAAGCGCTAGCCGCCTGTTTCTGCATCTGCGGCCACGAAGACTGGGCCCGCCAAGTCCTGAAACCCTTCCGC
TACGGCGAAGCCTTCCTAGAAATCAACGGGAAACTACTTAAGCGGTACGCCGCGTGCGCCGACGAAGACGAAATC
AAGCGCGCCGAGGAGGAATGGCTGGCCAAGATCGAGCGCGAATATGAGGAGAGTCGGGCCGCGGGCGGCGCAGAT
ATCTGGACAGTGGGAAATACGAATCGGAGGGTGGAGTCGGATTCCGATGACGATGATGAGGAGGGCTCTGGCAAG
GAGAACAACGATGAGGAAGAAGAGGAAGAGGAAGATAAAGACCCCTTCGCGATATCAGACGACTCCGAAGAAGAA
GAACAAATGGCCGCTATTCGCGCCAAGATCCTGAATTCCAAATCGTTTCAGAACCCCTCTGCCTCGGATAAGCCG
CAGCCGGAGAAGATTGCTCGGCCGGAGGAGGAAGGGTCCAAGTCGAGACCGTTGGAGGATTCGGATGCCGAGTCC
GGGTCCGCGGAGGGTAGTGAGGATGAGGCGTTCGATAGTATCATCAATGCGACGCCGGTGACGGATCGGATGGGG
ATTATTGCGGCGCAGAAGAAGAAGGAGAAGGAGACATTTAGTGCGTCGTTTTCGAGGACGGTCGTGGATGCGCCG
AAGAGGTGGTAA
Transcript >Ani_SJS100_1|g4130.t1
ATGGTCCGCCATAAAAAGGACAACTTCGCTCGAGGAGGCAAGAAATTCTCCTCCAAGGGTCCCCGTCCTCCCCGC
CGCGATCCCGCCGACCCTGACGCCGATGATGCCGACCGCCCCTCCAGACCTCCCTTCAAAGCCGCCTGCTGGGAT
CTGGGTCACTGTGATCCCAAGCGCTGCTCAGGAAAGAGGTTGATGAACTTTGGTCTGATGCGCGAGCTGCAGATT
GGTCAGCGATTCCCAGGTGTAATTGTCTCTCCCAACGCAAAGAAAATCATCTCCCCCGCTGACAAAGACCTCCTC
GAACAATTCGGCGCCGCAGTAGTAGAATGTTCCTGGGTGCGAGTGAAGGAAGTTCCCTGGTCGCGGATCGGAGGC
AAATGCGAACGACTCCTACCCTACCTCATCGCCGCCAACACAGTCAACTACGGCAAACCCTGGCGTCTAAACTGC
GTCGAAGCGCTAGCCGCCTGTTTCTGCATCTGCGGCCACGAAGACTGGGCCCGCCAAGTCCTGAAACCCTTCCGC
TACGGCGAAGCCTTCCTAGAAATCAACGGGAAACTACTTAAGCGGTACGCCGCGTGCGCCGACGAAGACGAAATC
AAGCGCGCCGAGGAGGAATGGCTGGCCAAGATCGAGCGCGAATATGAGGAGAGTCGGGCCGCGGGCGGCGCAGAT
ATCTGGACAGTGGGAAATACGAATCGGAGGGTGGAGTCGGATTCCGATGACGATGATGAGGAGGGCTCTGGCAAG
GAGAACAACGATGAGGAAGAAGAGGAAGAGGAAGATAAAGACCCCTTCGCGATATCAGACGACTCCGAAGAAGAA
GAACAAATGGCCGCTATTCGCGCCAAGATCCTGAATTCCAAATCGTTTCAGAACCCCTCTGCCTCGGATAAGCCG
CAGCCGGAGAAGATTGCTCGGCCGGAGGAGGAAGGGTCCAAGTCGAGACCGTTGGAGGATTCGGATGCCGAGTCC
GGGTCCGCGGAGGGTAGTGAGGATGAGGCGTTCGATAGTATCATCAATGCGACGCCGGTGACGGATCGGATGGGG
ATTATTGCGGCGCAGAAGAAGAAGGAGAAGGAGACATTTAGTGCGTCGTTTTCGAGGACGGTCGTGGATGCGCCG
AAGAGGTGGTAA
Gene >Ani_SJS100_1|g4130.t1
ATGGTCCGCCATAAAAAGGACAACTTCGCTCGAGGAGGCAAGAAATTCTCCTCCAAGGGTCCCCGTCCTCCCCGC
CGCGATCCCGCCGACCCTGACGCCGATGATGCCGACCGCCCCTCCAGACCTCCCTTCAAAGCCGCCTGCTGGGAT
CTGGGTCACTGTGATCCCAAGCGCTGCTCAGGAAAGAGGTTGATGAACTTTGGTCTGATGCGCGAGCTGCAGATT
GGTCAGCGATTCCCAGGTGTAATTGTCTCGTACGTTTTTCACCCATCCTTACCTACACAATACTCACAGAGGCAA
CCCCAAAAGCTAACATCTATATCACACCTGTCCAGTCCCAACGCAAAGAAAATCATCTCCCCCGCTGACAAAGAC
CTCCTCGAACAATTCGGCGCCGCAGTAGTAGAATGTTCCTGGGTGCGAGTGAAGGAAGTTCCCTGGTCGCGGATC
GGAGGCAAATGCGAACGACTCCGTAAGCCCTCAAACCCTTAACAACCCAAACCTCCAACAACACTAACAAACTAT
CTTGGAATAAAATAGTACCCTACCTCATCGCCGCCAACACAGTCAACTACGGCAAACCCTGGCGTCTAAACTGCG
TCGAAGCGCTAGCCGCCTGTTTCTGCATCTGCGGCCACGAAGACTGGGCCCGCCAAGTCCTGAAACCCTTCCGCT
ACGGCGAAGCCTTCCTAGAAATCAACGGGAAACTACTTAAGCGGTACGCCGCGTGCGCCGACGAAGACGAAATCA
AGCGCGCCGAGGAGGAATGGCTGGCCAAGATCGAGCGCGAATATGAGGAGAGTCGGGCCGCGGGCGGCGCAGATA
TCTGGACAGTGGGAAATACGAATCGGAGGGTGGAGTCGGATTCCGATGACGATGATGAGGAGGGCTCTGGCAAGG
AGAACAACGATGAGGAAGAAGAGGAAGAGGAAGATAAAGACCCCTTCGCGATATCAGACGACTCCGAAGAAGAAG
AACAAATGGCCGCTATTCGCGCCAAGATCCTGAATTCCAAATCGTTTCAGAACCCCTCTGCCTCGGATAAGCCGC
AGCCGGAGAAGATTGCTCGGCCGGAGGAGGAAGGGTCCAAGTCGAGACCGTTGGAGGATTCGGATGCCGAGTCCG
GGTCCGCGGAGGGTAGTGAGGATGAGGCGTTCGATAGTATCATCAATGCGACGCCGGTGACGGATCGGATGGGGA
TTATTGCGGCGCAGAAGAAGAAGGAGAAGGAGACATTTAGTGCGTCGTTTTCGAGGACGGTCGTGGATGCGCCGA
AGAGGTGGTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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