© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ani_SJS100_1|g4108.t1 |
| Gene name | |
| Location | scaffold_020:141195..142175 |
| Strand | - |
| Gene length (bp) | 980 |
| Transcript length (bp) | 825 |
| Coding sequence length (bp) | 825 |
| Protein length (aa) | 275 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF07264 | EI24 | Etoposide-induced protein 2.4 (EI24) | 2.6E-20 | 15 | 229 |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 11 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 35 | 57 | 22 |
| 2 | 69 | 91 | 22 |
| 3 | 155 | 177 | 22 |
| 4 | 209 | 231 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS100_1|g4108.t1 MPHRHIDTTKAAWLYPLRGIYYFASHRYLWPLFKTRLIPIVLLSAFIYVLLFLFAYLPQVAFLSIFQGVGAWING AFLVLGEGAAIVAALFEAFFVDETLVDIFDSVLVSEGHGELVTMSRVLYPQGDDVVKRLGKPTKSAVYAPFSLRQ IVEFIVLLPLNFIPVAGTPMFLVLTGYRAGPFHHWRYFQLLDLSKQQRKERIRRRQLQYTTFGTVALILQLVPIL SMFFLMSTAVGSALWTVDLENKRDLLGRRPGRDPEGLYHDDYNDDDAMI* |
| Coding | >Ani_SJS100_1|g4108.t1 ATGCCACACAGACATATCGATACTACTAAAGCAGCGTGGCTATATCCCCTGCGGGGCATCTATTATTTTGCGTCG CACCGCTACCTTTGGCCTCTTTTCAAGACTCGTCTGATTCCGATCGTCCTCCTGTCCGCTTTCATTTACGTCCTG CTCTTCCTATTTGCATATTTGCCCCAAGTGGCCTTCCTGTCCATCTTCCAGGGTGTCGGGGCCTGGATCAATGGC GCGTTCCTGGTACTAGGGGAGGGGGCGGCGATTGTTGCTGCTCTTTTTGAAGCCTTCTTTGTCGATGAGACCCTC GTGGACATTTTCGACTCGGTGCTCGTGAGTGAGGGCCATGGCGAACTCGTCACCATGTCGAGGGTTTTGTACCCC CAGGGCGATGATGTCGTCAAACGGCTCGGCAAGCCCACCAAGAGCGCCGTTTATGCACCGTTCTCACTGCGGCAA ATCGTGGAATTCATTGTGCTTCTACCGCTGAACTTTATCCCGGTGGCCGGAACACCCATGTTCCTCGTGCTGACC GGCTACCGGGCGGGCCCCTTCCACCATTGGCGATACTTTCAGTTGTTGGATCTTTCGAAACAACAGCGCAAAGAA AGGATCCGCCGCAGACAATTGCAATATACCACATTTGGGACGGTGGCTCTGATACTTCAGTTGGTCCCCATTTTG TCCATGTTTTTCCTGATGTCAACCGCGGTTGGATCTGCTCTTTGGACGGTGGATCTCGAAAACAAGCGCGATCTT TTGGGCAGGAGGCCCGGGCGAGATCCCGAGGGTCTCTACCACGATGATTACAATGATGATGATGCGATGATTTAG |
| Transcript | >Ani_SJS100_1|g4108.t1 ATGCCACACAGACATATCGATACTACTAAAGCAGCGTGGCTATATCCCCTGCGGGGCATCTATTATTTTGCGTCG CACCGCTACCTTTGGCCTCTTTTCAAGACTCGTCTGATTCCGATCGTCCTCCTGTCCGCTTTCATTTACGTCCTG CTCTTCCTATTTGCATATTTGCCCCAAGTGGCCTTCCTGTCCATCTTCCAGGGTGTCGGGGCCTGGATCAATGGC GCGTTCCTGGTACTAGGGGAGGGGGCGGCGATTGTTGCTGCTCTTTTTGAAGCCTTCTTTGTCGATGAGACCCTC GTGGACATTTTCGACTCGGTGCTCGTGAGTGAGGGCCATGGCGAACTCGTCACCATGTCGAGGGTTTTGTACCCC CAGGGCGATGATGTCGTCAAACGGCTCGGCAAGCCCACCAAGAGCGCCGTTTATGCACCGTTCTCACTGCGGCAA ATCGTGGAATTCATTGTGCTTCTACCGCTGAACTTTATCCCGGTGGCCGGAACACCCATGTTCCTCGTGCTGACC GGCTACCGGGCGGGCCCCTTCCACCATTGGCGATACTTTCAGTTGTTGGATCTTTCGAAACAACAGCGCAAAGAA AGGATCCGCCGCAGACAATTGCAATATACCACATTTGGGACGGTGGCTCTGATACTTCAGTTGGTCCCCATTTTG TCCATGTTTTTCCTGATGTCAACCGCGGTTGGATCTGCTCTTTGGACGGTGGATCTCGAAAACAAGCGCGATCTT TTGGGCAGGAGGCCCGGGCGAGATCCCGAGGGTCTCTACCACGATGATTACAATGATGATGATGCGATGATTTAG |
| Gene | >Ani_SJS100_1|g4108.t1 ATGCCACACAGACATATCGATACTACTAAAGCAGCGTGGCTATATCCCCTGCGGGTATGTTTGGCCTCGTTGCTG CCTGTTCACTTTCGTGCGGTGAAACTGATTGTTTGGTGATTCTACAGGGCATCTATTATTTTGCGTCGCACCGCT ACCTTTGGCCTCTTTTCAAGACTCGTCTGATTCCGATCGTCCTCCTGTCCGCTTTCATTTACGTCCTGCTCTTCC TATTTGCATATTTGCCCCAAGTGGCCTTCCTGTCCATCTTCCAGGGTGTCGGGGCCTGGATCAATGGCGCGTTCC TGGTACTAGGGGAGGGGGCGGCGATTGTTGCTGCTCTTTTTGAAGCCTTCTTTGTCGATGAGACCCTCGTGGACA TTTTCGACTCGGTGCTCGTGAGTGAGGGCCATGGCGAACTCGTCACCATGTCGAGGGTTTTGTACCCCCAGGGCG ATGATGTCGTCAAACGGCTCGGCAAGCCCACCAAGAGCGCCGTTTATGCACCGTTCTCACTGCGGCAAATCGTGG AATTCATTGTGCTTCTACCGCTGAACTTTATCCCGGTGGCCGGAACACCCATGTTCCTCGTGCTGACCGGCTACC GGGCGGGCCCCTTCCACCATTGGCGATACTTTCAGTTGTTGGATCTTTCGAAACAACAGCGCAAAGAAAGGATCC GCCGCAGACAATTGCAATATACCACGTGGGTTTCAACCTTCTTTCCCCTGACACAACCCCCTTTGAAGGTCTACC GAGGTTCATACTAACAATCAACCACGAGGGAACCTAGATTTGGGACGGTGGCTCTGATACTTCAGTTGGTCCCCA TTTTGTCCATGTTTTTCCTGATGTCAACCGCGGTTGGATCTGCTCTTTGGACGGTGGATCTCGAAAACAAGCGCG ATCTTTTGGGCAGGAGGCCCGGGCGAGATCCCGAGGGTCTCTACCACGATGATTACAATGATGATGATGCGATGA TTTAG |