Protein ID | Ani_SJS100_1|g4084.t1 |
Gene name | |
Location | scaffold_020:59925..61554 |
Strand | - |
Gene length (bp) | 1629 |
Transcript length (bp) | 1629 |
Coding sequence length (bp) | 1629 |
Protein length (aa) | 543 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF00628 | PHD | PHD-finger | 1.2E-08 | 276 | 329 |
Orthofinder run ID | 3 |
Orthogroup | 4393 |
Change Orthofinder run |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ani_SJS100_1|g4084.t1 MGKMRASSTIIELPTAPFVYSNNVAPPAVPQAASPVPQGNAGDIVKPTNLPNLAPKPPSIISVDASPASSGSPVP VNVDLKPTSSTPVNAVSRQSASPIPVNIAPKPSTTPVGVNSAPTPLTASIPAEPTAAIKIAPKPNGTLSDGAAPA STSLPTPQQPQTAAKPKKPQAAAGSRQRKGAANGNKRGKKRRRNNDSDGEDIIRAGDSSSDESDVAPTATQTKSG RLVNRPSLYVPAPSTPAVAKEVSNSVDASDNAVVARKRKRIHRRGKDAIIICLHCQRGHSPLSNSIVFCDECNAA WHQWCHDPPIGADVVAVKEKEWFCRECRPVQISVIQPTVVRSNPNLTSGPLVPNYPLLSIPKGEVGAAEFSADER RGFLSSLSHATLVELLMTISDNNPILPMFPENMRDLQSSKFAFRLPISDAPTPSTSVSGNVSTSNDTRDSASAST EGNKQNEDSAPEATSSSTTRRQYEEISDDDSEYEFQEHRLYPRAGNGFRLSLNVDDMDIMREDPACPTFSYSLHG PAQVRAQMNDIVPVWGT* |
Coding | >Ani_SJS100_1|g4084.t1 ATGGGAAAAATGAGGGCTTCTTCTACAATTATTGAATTGCCTACGGCGCCGTTCGTGTATTCGAACAATGTGGCG CCACCGGCGGTCCCTCAGGCCGCCTCCCCAGTGCCTCAAGGAAACGCTGGAGACATAGTAAAGCCTACAAACCTA CCGAATCTCGCTCCCAAACCACCCAGCATAATATCGGTCGACGCATCACCAGCAAGTTCGGGGTCTCCAGTCCCG GTCAATGTCGACCTAAAACCAACAAGTTCAACGCCCGTCAATGCAGTTTCACGGCAGTCGGCGTCTCCAATTCCA GTCAATATCGCTCCAAAGCCGAGCACAACGCCGGTCGGTGTTAATTCAGCACCAACACCATTGACTGCATCCATA CCAGCAGAGCCCACAGCTGCAATCAAAATCGCCCCTAAACCAAATGGGACATTGTCAGATGGTGCAGCACCAGCA TCAACCTCATTGCCTACACCACAACAGCCACAGACGGCAGCCAAGCCCAAGAAACCGCAAGCAGCAGCTGGCTCG CGCCAGCGAAAGGGTGCGGCAAATGGTAACAAGCGCGGCAAGAAGCGCAGACGAAATAACGATAGTGACGGGGAA GATATCATAAGGGCCGGAGACTCCAGTAGCGACGAATCAGATGTGGCACCAACAGCGACGCAAACGAAATCCGGC CGCCTGGTCAACCGGCCTTCGTTATATGTACCTGCGCCGTCAACTCCTGCGGTAGCCAAGGAGGTAAGCAACTCG GTGGACGCGTCTGATAATGCAGTCGTCGCACGAAAGCGTAAACGTATCCACCGCCGAGGGAAAGATGCGATCATC ATTTGCTTGCATTGTCAAAGGGGCCATAGCCCATTGAGCAATTCGATCGTATTCTGTGACGAGTGCAATGCTGCA TGGCATCAGTGGTGTCACGACCCTCCTATTGGCGCAGACGTTGTTGCGGTCAAGGAAAAGGAATGGTTCTGTCGA GAATGCCGACCTGTCCAAATTTCTGTCATTCAACCAACGGTCGTGCGGAGCAATCCCAACCTTACATCTGGGCCA TTAGTCCCTAATTATCCTCTATTATCAATCCCTAAAGGCGAGGTTGGTGCAGCGGAGTTTTCGGCCGATGAGCGA CGGGGCTTCCTGTCAAGTCTTTCGCACGCCACCCTCGTTGAGCTGCTGATGACTATCTCGGACAACAACCCGATA TTGCCGATGTTTCCTGAGAACATGAGGGACCTTCAGTCTTCAAAGTTTGCTTTTCGTCTACCGATCTCCGATGCC CCGACTCCGTCGACATCCGTGTCGGGTAATGTCTCGACAAGCAATGATACAAGGGATTCCGCGTCTGCATCTACT GAAGGGAACAAACAAAATGAGGATTCTGCACCCGAAGCTACATCTTCATCAACAACTCGAAGGCAGTATGAGGAG ATCTCTGATGACGACTCGGAATATGAATTCCAGGAGCACCGGTTGTATCCACGCGCTGGGAACGGGTTCCGGCTA TCGCTTAATGTGGATGACATGGATATTATGCGCGAAGACCCTGCTTGTCCTACCTTCAGCTATTCGCTACACGGA CCTGCGCAGGTACGCGCTCAAATGAATGATATCGTTCCTGTGTGGGGAACATGA |
Transcript | >Ani_SJS100_1|g4084.t1 ATGGGAAAAATGAGGGCTTCTTCTACAATTATTGAATTGCCTACGGCGCCGTTCGTGTATTCGAACAATGTGGCG CCACCGGCGGTCCCTCAGGCCGCCTCCCCAGTGCCTCAAGGAAACGCTGGAGACATAGTAAAGCCTACAAACCTA CCGAATCTCGCTCCCAAACCACCCAGCATAATATCGGTCGACGCATCACCAGCAAGTTCGGGGTCTCCAGTCCCG GTCAATGTCGACCTAAAACCAACAAGTTCAACGCCCGTCAATGCAGTTTCACGGCAGTCGGCGTCTCCAATTCCA GTCAATATCGCTCCAAAGCCGAGCACAACGCCGGTCGGTGTTAATTCAGCACCAACACCATTGACTGCATCCATA CCAGCAGAGCCCACAGCTGCAATCAAAATCGCCCCTAAACCAAATGGGACATTGTCAGATGGTGCAGCACCAGCA TCAACCTCATTGCCTACACCACAACAGCCACAGACGGCAGCCAAGCCCAAGAAACCGCAAGCAGCAGCTGGCTCG CGCCAGCGAAAGGGTGCGGCAAATGGTAACAAGCGCGGCAAGAAGCGCAGACGAAATAACGATAGTGACGGGGAA GATATCATAAGGGCCGGAGACTCCAGTAGCGACGAATCAGATGTGGCACCAACAGCGACGCAAACGAAATCCGGC CGCCTGGTCAACCGGCCTTCGTTATATGTACCTGCGCCGTCAACTCCTGCGGTAGCCAAGGAGGTAAGCAACTCG GTGGACGCGTCTGATAATGCAGTCGTCGCACGAAAGCGTAAACGTATCCACCGCCGAGGGAAAGATGCGATCATC ATTTGCTTGCATTGTCAAAGGGGCCATAGCCCATTGAGCAATTCGATCGTATTCTGTGACGAGTGCAATGCTGCA TGGCATCAGTGGTGTCACGACCCTCCTATTGGCGCAGACGTTGTTGCGGTCAAGGAAAAGGAATGGTTCTGTCGA GAATGCCGACCTGTCCAAATTTCTGTCATTCAACCAACGGTCGTGCGGAGCAATCCCAACCTTACATCTGGGCCA TTAGTCCCTAATTATCCTCTATTATCAATCCCTAAAGGCGAGGTTGGTGCAGCGGAGTTTTCGGCCGATGAGCGA CGGGGCTTCCTGTCAAGTCTTTCGCACGCCACCCTCGTTGAGCTGCTGATGACTATCTCGGACAACAACCCGATA TTGCCGATGTTTCCTGAGAACATGAGGGACCTTCAGTCTTCAAAGTTTGCTTTTCGTCTACCGATCTCCGATGCC CCGACTCCGTCGACATCCGTGTCGGGTAATGTCTCGACAAGCAATGATACAAGGGATTCCGCGTCTGCATCTACT GAAGGGAACAAACAAAATGAGGATTCTGCACCCGAAGCTACATCTTCATCAACAACTCGAAGGCAGTATGAGGAG ATCTCTGATGACGACTCGGAATATGAATTCCAGGAGCACCGGTTGTATCCACGCGCTGGGAACGGGTTCCGGCTA TCGCTTAATGTGGATGACATGGATATTATGCGCGAAGACCCTGCTTGTCCTACCTTCAGCTATTCGCTACACGGA CCTGCGCAGGTACGCGCTCAAATGAATGATATCGTTCCTGTGTGGGGAACATGA |
Gene | >Ani_SJS100_1|g4084.t1 ATGGGAAAAATGAGGGCTTCTTCTACAATTATTGAATTGCCTACGGCGCCGTTCGTGTATTCGAACAATGTGGCG CCACCGGCGGTCCCTCAGGCCGCCTCCCCAGTGCCTCAAGGAAACGCTGGAGACATAGTAAAGCCTACAAACCTA CCGAATCTCGCTCCCAAACCACCCAGCATAATATCGGTCGACGCATCACCAGCAAGTTCGGGGTCTCCAGTCCCG GTCAATGTCGACCTAAAACCAACAAGTTCAACGCCCGTCAATGCAGTTTCACGGCAGTCGGCGTCTCCAATTCCA GTCAATATCGCTCCAAAGCCGAGCACAACGCCGGTCGGTGTTAATTCAGCACCAACACCATTGACTGCATCCATA CCAGCAGAGCCCACAGCTGCAATCAAAATCGCCCCTAAACCAAATGGGACATTGTCAGATGGTGCAGCACCAGCA TCAACCTCATTGCCTACACCACAACAGCCACAGACGGCAGCCAAGCCCAAGAAACCGCAAGCAGCAGCTGGCTCG CGCCAGCGAAAGGGTGCGGCAAATGGTAACAAGCGCGGCAAGAAGCGCAGACGAAATAACGATAGTGACGGGGAA GATATCATAAGGGCCGGAGACTCCAGTAGCGACGAATCAGATGTGGCACCAACAGCGACGCAAACGAAATCCGGC CGCCTGGTCAACCGGCCTTCGTTATATGTACCTGCGCCGTCAACTCCTGCGGTAGCCAAGGAGGTAAGCAACTCG GTGGACGCGTCTGATAATGCAGTCGTCGCACGAAAGCGTAAACGTATCCACCGCCGAGGGAAAGATGCGATCATC ATTTGCTTGCATTGTCAAAGGGGCCATAGCCCATTGAGCAATTCGATCGTATTCTGTGACGAGTGCAATGCTGCA TGGCATCAGTGGTGTCACGACCCTCCTATTGGCGCAGACGTTGTTGCGGTCAAGGAAAAGGAATGGTTCTGTCGA GAATGCCGACCTGTCCAAATTTCTGTCATTCAACCAACGGTCGTGCGGAGCAATCCCAACCTTACATCTGGGCCA TTAGTCCCTAATTATCCTCTATTATCAATCCCTAAAGGCGAGGTTGGTGCAGCGGAGTTTTCGGCCGATGAGCGA CGGGGCTTCCTGTCAAGTCTTTCGCACGCCACCCTCGTTGAGCTGCTGATGACTATCTCGGACAACAACCCGATA TTGCCGATGTTTCCTGAGAACATGAGGGACCTTCAGTCTTCAAAGTTTGCTTTTCGTCTACCGATCTCCGATGCC CCGACTCCGTCGACATCCGTGTCGGGTAATGTCTCGACAAGCAATGATACAAGGGATTCCGCGTCTGCATCTACT GAAGGGAACAAACAAAATGAGGATTCTGCACCCGAAGCTACATCTTCATCAACAACTCGAAGGCAGTATGAGGAG ATCTCTGATGACGACTCGGAATATGAATTCCAGGAGCACCGGTTGTATCCACGCGCTGGGAACGGGTTCCGGCTA TCGCTTAATGTGGATGACATGGATATTATGCGCGAAGACCCTGCTTGTCCTACCTTCAGCTATTCGCTACACGGA CCTGCGCAGGTACGCGCTCAAATGAATGATATCGTTCCTGTGTGGGGAACATGA |