Protein ID | Ani_SJS100_1|g4079.t1 |
Gene name | |
Location | scaffold_020:51059..52736 |
Strand | - |
Gene length (bp) | 1677 |
Transcript length (bp) | 1536 |
Coding sequence length (bp) | 1536 |
Protein length (aa) | 512 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF02201 | SWIB | SWIB/MDM2 domain | 3.1E-23 | 285 | 356 |
Orthofinder run ID | 3 |
Orthogroup | 4388 |
Change Orthofinder run |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ani_SJS100_1|g4079.t1 MNAQIPPNYGRGFPPQAAQRSPATPRRGPPGPAAAMPVPMPQHAVPPQYIPPQRNMQPPNDAALRRSRKPTDKNI PDGIEEVIIGEGVQQYKSLRDLEKRLDAAIVRKRLDIQDSISKTVKKYRTMRIWISNTVENQPWQTANGAAPGSN PGSGRYKVRIEGRLLDDDTDPTAPEDSDDEATEQTDNGDAMEQDGPNANATTKKSSNKRTKQRFSHFFKSITVDF DKSSTASPEEVKPITWTKPQLPPNTVTLPPTADFDSMQFTRASQENLNVTFSLVRDETPERFKLSKELAEVLDVE EETRSGIVLGIWDYIRAMGLQEDEEKRLVRCDHRLRSIFGRDQMFFPQIPESIGPHTSPIDPIHLPYTIRVDEDY HKDPTPTVYDIQVALEDPLRSKMLALTQNPQYTASMRQIATLDDQVALIVQALTHSRARHSFYTALSKDPATFVR RWINSQRRDLETILGEATRGGGEDASGPEFRRGGTDGVWDTTVAREAVRYMLAKPEAAMGR* |
Coding | >Ani_SJS100_1|g4079.t1 ATGAATGCCCAGATCCCACCCAACTACGGCCGTGGGTTCCCCCCACAAGCCGCCCAACGCTCCCCTGCCACGCCT CGTCGCGGTCCTCCAGGTCCTGCTGCTGCGATGCCTGTCCCCATGCCTCAGCACGCCGTTCCACCTCAATACATC CCTCCCCAGCGCAACATGCAGCCTCCCAATGACGCCGCCCTGCGTCGCAGCCGCAAACCCACCGACAAGAACATC CCCGACGGCATTGAGGAAGTAATTATCGGCGAAGGTGTGCAGCAGTACAAGAGCCTCCGCGACCTGGAGAAACGC CTCGATGCAGCCATTGTCCGTAAGCGCCTGGACATCCAAGACTCCATCAGCAAGACTGTCAAGAAGTACCGCACG ATGCGCATTTGGATCTCGAACACTGTCGAAAACCAACCCTGGCAGACTGCCAACGGTGCCGCCCCCGGAAGCAAC CCCGGCTCCGGACGGTACAAGGTACGCATCGAGGGACGTCTTCTGGACGACGACACCGACCCGACCGCCCCGGAG GATAGTGACGACGAAGCTACCGAGCAGACGGACAACGGCGACGCGATGGAGCAAGATGGACCTAACGCCAATGCC ACTACCAAAAAGTCGTCCAACAAGCGCACCAAGCAGCGCTTCTCGCACTTCTTCAAATCCATTACCGTCGACTTC GATAAGTCCTCCACCGCCAGCCCGGAAGAAGTCAAGCCAATCACCTGGACCAAACCGCAATTACCCCCTAACACT GTCACTCTGCCGCCCACAGCAGACTTCGACTCGATGCAGTTCACCCGCGCGTCACAGGAGAACCTGAACGTGACA TTCAGTCTCGTGCGCGACGAGACACCAGAACGGTTCAAGCTAAGCAAAGAGCTAGCAGAAGTACTAGACGTAGAG GAAGAAACACGAAGCGGCATTGTTCTCGGAATCTGGGACTACATCCGTGCCATGGGCCTTCAAGAAGATGAAGAG AAGCGACTCGTCCGCTGTGACCATCGTCTACGATCGATCTTCGGCCGCGACCAAATGTTCTTCCCTCAAATCCCC GAAAGCATCGGCCCTCACACCAGCCCCATTGACCCCATCCACCTCCCCTACACCATCCGCGTCGACGAAGACTAC CACAAGGACCCGACCCCTACCGTCTACGACATCCAAGTCGCCCTGGAAGACCCTCTCCGCTCCAAGATGCTCGCC CTCACCCAGAACCCGCAATACACGGCCTCCATGCGCCAGATCGCCACGCTAGACGACCAGGTCGCCCTCATCGTG CAAGCCCTGACGCACTCCCGCGCCCGTCACTCCTTCTACACGGCTCTCAGCAAGGATCCCGCTACGTTCGTCCGC CGCTGGATCAATTCCCAGCGCAGAGACTTGGAGACTATTCTTGGAGAGGCGACGCGTGGTGGTGGCGAAGATGCT AGTGGGCCTGAGTTCCGTCGTGGTGGTACGGATGGCGTTTGGGATACTACTGTGGCGAGGGAAGCGGTGCGGTAT ATGCTTGCTAAGCCGGAGGCGGCGATGGGGAGGTGA |
Transcript | >Ani_SJS100_1|g4079.t1 ATGAATGCCCAGATCCCACCCAACTACGGCCGTGGGTTCCCCCCACAAGCCGCCCAACGCTCCCCTGCCACGCCT CGTCGCGGTCCTCCAGGTCCTGCTGCTGCGATGCCTGTCCCCATGCCTCAGCACGCCGTTCCACCTCAATACATC CCTCCCCAGCGCAACATGCAGCCTCCCAATGACGCCGCCCTGCGTCGCAGCCGCAAACCCACCGACAAGAACATC CCCGACGGCATTGAGGAAGTAATTATCGGCGAAGGTGTGCAGCAGTACAAGAGCCTCCGCGACCTGGAGAAACGC CTCGATGCAGCCATTGTCCGTAAGCGCCTGGACATCCAAGACTCCATCAGCAAGACTGTCAAGAAGTACCGCACG ATGCGCATTTGGATCTCGAACACTGTCGAAAACCAACCCTGGCAGACTGCCAACGGTGCCGCCCCCGGAAGCAAC CCCGGCTCCGGACGGTACAAGGTACGCATCGAGGGACGTCTTCTGGACGACGACACCGACCCGACCGCCCCGGAG GATAGTGACGACGAAGCTACCGAGCAGACGGACAACGGCGACGCGATGGAGCAAGATGGACCTAACGCCAATGCC ACTACCAAAAAGTCGTCCAACAAGCGCACCAAGCAGCGCTTCTCGCACTTCTTCAAATCCATTACCGTCGACTTC GATAAGTCCTCCACCGCCAGCCCGGAAGAAGTCAAGCCAATCACCTGGACCAAACCGCAATTACCCCCTAACACT GTCACTCTGCCGCCCACAGCAGACTTCGACTCGATGCAGTTCACCCGCGCGTCACAGGAGAACCTGAACGTGACA TTCAGTCTCGTGCGCGACGAGACACCAGAACGGTTCAAGCTAAGCAAAGAGCTAGCAGAAGTACTAGACGTAGAG GAAGAAACACGAAGCGGCATTGTTCTCGGAATCTGGGACTACATCCGTGCCATGGGCCTTCAAGAAGATGAAGAG AAGCGACTCGTCCGCTGTGACCATCGTCTACGATCGATCTTCGGCCGCGACCAAATGTTCTTCCCTCAAATCCCC GAAAGCATCGGCCCTCACACCAGCCCCATTGACCCCATCCACCTCCCCTACACCATCCGCGTCGACGAAGACTAC CACAAGGACCCGACCCCTACCGTCTACGACATCCAAGTCGCCCTGGAAGACCCTCTCCGCTCCAAGATGCTCGCC CTCACCCAGAACCCGCAATACACGGCCTCCATGCGCCAGATCGCCACGCTAGACGACCAGGTCGCCCTCATCGTG CAAGCCCTGACGCACTCCCGCGCCCGTCACTCCTTCTACACGGCTCTCAGCAAGGATCCCGCTACGTTCGTCCGC CGCTGGATCAATTCCCAGCGCAGAGACTTGGAGACTATTCTTGGAGAGGCGACGCGTGGTGGTGGCGAAGATGCT AGTGGGCCTGAGTTCCGTCGTGGTGGTACGGATGGCGTTTGGGATACTACTGTGGCGAGGGAAGCGGTGCGGTAT ATGCTTGCTAAGCCGGAGGCGGCGATGGGGAGGTGA |
Gene | >Ani_SJS100_1|g4079.t1 ATGAATGCCCAGATCCCACCCAACTACGGCCGTGGGTTCCCCCCACAAGCCGCCCAACGCTCCCCTGCCACGCCT CGTCGCGGTCCTCCAGGTCCTGGTGAGCCTCCACCCTTTAACCCAATCAAACCCCGGCGGAACTATTTCTTCTAA CTCCTTCTCCCTCGTATAGCTGCTGCGATGCCTGTCCCCATGCCTCAGCACGCCGTTCCACCTCAATACATCCCT CCCCAGCGCAACATGCAGCCTCCCAATGACGCCGCCCTGCGTCGCAGCCGCAAACCCACCGACAAGAACATCCCC GACGGCATTGAGGAAGTAATTATCGGCGAAGGTGTGCAGCAGTACAAGAGCCTCCGCGACCTGGAGAAACGCCTC GATGCAGCCATTGTCCGTAAGCGCCTGGACATCCAAGACTCCATCAGCAAGACTGTCAAGAAGTACCGCACGATG CGCATTTGGATCTCGAACACTGTCGAAAACCAACCCTGGCAGACTGCCAACGGTGCCGCCCCCGGAAGCAACCCC GGCTCCGGACGGTACAAGGTACGCATCGAGGGACGTCTTCTGGACGACGACACCGACCCGACCGCCCCGGAGGAT AGTGACGACGAAGCTACCGAGCAGACGGACAACGGCGACGCGATGGAGCAAGATGGACCTAACGCCAATGCCACT ACCAAAAAGTCGTCCAACAAGCGCACCAAGCAGCGCTTCTCGCACTTCTTCAAATCCATTACCGTCGACTTCGAT AAGTCCTCCACCGCCAGCCCGGAAGAAGTCAAGCCAATCACCTGGACCAAACCGCAATTACCCCCTAACACTGTC ACTCTGCCGCCCACAGCAGACTTCGACTCGATGCAGTTCACCCGCGCGTCACAGGAGAACCTGAACGTGACATTC AGTCTCGTGCGCGACGAGACACCAGAACGGTTCAAGCTAAGCAAAGAGCTAGCAGAAGTACTAGACGTAGAGGAA GAAACACGAAGCGGCATTGTTCTCGGAATCTGGGACTACATCCGTGCCATGGGCCTTCAAGAAGATGAAGAGAAG CGACTCGTCCGCTGTGACCATCGTCTACGATCGGTACCTCCCCTCCCCATCCCCATCCCCATTCCCGATATAATC CAAGACTAACCCGACCCAACCGCGCAGATCTTCGGCCGCGACCAAATGTTCTTCCCTCAAATCCCCGAAAGCATC GGCCCTCACACCAGCCCCATTGACCCCATCCACCTCCCCTACACCATCCGCGTCGACGAAGACTACCACAAGGAC CCGACCCCTACCGTCTACGACATCCAAGTCGCCCTGGAAGACCCTCTCCGCTCCAAGATGCTCGCCCTCACCCAG AACCCGCAATACACGGCCTCCATGCGCCAGATCGCCACGCTAGACGACCAGGTCGCCCTCATCGTGCAAGCCCTG ACGCACTCCCGCGCCCGTCACTCCTTCTACACGGCTCTCAGCAAGGATCCCGCTACGTTCGTCCGCCGCTGGATC AATTCCCAGCGCAGAGACTTGGAGACTATTCTTGGAGAGGCGACGCGTGGTGGTGGCGAAGATGCTAGTGGGCCT GAGTTCCGTCGTGGTGGTACGGATGGCGTTTGGGATACTACTGTGGCGAGGGAAGCGGTGCGGTATATGCTTGCT AAGCCGGAGGCGGCGATGGGGAGGTGA |