© 2022 - Robin Ohm - Utrecht University - The Netherlands
Built with Python Django and Wagtail
| Protein ID | Ani_SJS100_1|g4071.t1 |
| Gene name | |
| Location | scaffold_020:24536..26108 |
| Strand | - |
| Gene length (bp) | 1572 |
| Transcript length (bp) | 1398 |
| Coding sequence length (bp) | 1398 |
| Protein length (aa) | 466 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF07690 | MFS_1 | Major Facilitator Superfamily | 1.6E-23 | 84 | 371 |
| PF07690 | MFS_1 | Major Facilitator Superfamily | 3.3E-09 | 281 | 447 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0055085 | transmembrane transport | Yes |
| GO:0022857 | transmembrane transporter activity | Yes |
| GO:0008150 | biological_process | No |
| GO:0051234 | establishment of localization | No |
| GO:0051179 | localization | No |
| GO:0009987 | cellular process | No |
| GO:0005215 | transporter activity | No |
| GO:0006810 | transport | No |
| GO:0003674 | molecular_function | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 12 | 0.45 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 76 | 98 | 22 |
| 2 | 113 | 135 | 22 |
| 3 | 142 | 161 | 19 |
| 4 | 165 | 187 | 22 |
| 5 | 200 | 222 | 22 |
| 6 | 237 | 255 | 18 |
| 7 | 276 | 298 | 22 |
| 8 | 308 | 330 | 22 |
| 9 | 343 | 360 | 17 |
| 10 | 364 | 386 | 22 |
| 11 | 398 | 420 | 22 |
| 12 | 433 | 455 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS100_1|g4071.t1 MAIEQKSATSITEQPWRSTDLQGPSDLSTAHSIASYGRPRSFDIVEPPAQLSTNTFHIRDSVPDDVFPDGGTRSW FVVLGSFFLLMSSYGMMNSTGVLQSYFASNQLSDYTSSVIGWIPGLFVFCGLGLGAQIGPMFDRYGPTGILIAGT ACYVAGLLLMAECHLYWQFILTFGVLTGMGAALLSTAAISAVPHWFDRRVGLAMGTAMAGAGVGGVAFPWVLRAG FKDLGYKWTMRLLALIVGTMCAIGIAFVRSRLPRSQSKPSINVRAFQDARFTWLTMGTFIMELEVFGCLGLYPTY VVMQGFGTTTSIILLSILNVFSTIGRLVAGGVADKYGRINTQIGLLGLGAVAVFVIWLPFGNKLAGLYIFSCVYG FASGSFISLAPACIGQISKASEVGGRFGVCYLTVSFATLISIPIGGEMIETVGKQAMVAFLGAVLVIAMGMFSMA RWSCLNYRWRWQAKI* |
| Coding | >Ani_SJS100_1|g4071.t1 ATGGCCATCGAGCAAAAGTCGGCCACCTCGATCACCGAGCAGCCCTGGCGCTCAACAGACTTGCAAGGCCCGTCT GACCTCAGCACCGCGCATTCCATTGCCAGCTATGGAAGACCCCGATCATTCGACATCGTTGAACCGCCGGCCCAG CTCTCCACAAACACCTTTCACATCCGTGATTCTGTCCCCGACGATGTCTTTCCAGATGGTGGGACCCGGTCATGG TTTGTCGTTTTGGGATCATTTTTCCTACTGATGAGCAGTTACGGCATGATGAACTCTACTGGTGTCCTACAGAGT TATTTCGCCAGCAACCAACTCTCGGACTACACCAGTAGTGTCATCGGCTGGATCCCAGGTCTATTTGTCTTCTGT GGCCTGGGCTTGGGTGCCCAAATTGGTCCGATGTTCGACAGGTACGGTCCTACGGGTATCCTTATTGCTGGGACG GCCTGCTACGTCGCGGGTCTGCTACTAATGGCCGAATGCCACCTCTACTGGCAATTTATCCTAACCTTTGGCGTA CTCACTGGCATGGGCGCCGCTCTACTGAGCACAGCCGCCATTTCTGCTGTCCCTCATTGGTTCGATCGCCGAGTT GGCTTGGCCATGGGCACGGCAATGGCCGGAGCGGGAGTTGGGGGAGTGGCGTTTCCCTGGGTCCTCCGAGCAGGG TTTAAGGACCTTGGGTATAAGTGGACCATGCGGCTGCTTGCATTGATTGTGGGGACCATGTGTGCGATTGGAATT GCTTTTGTTCGTTCTCGTCTACCAAGAAGCCAGAGTAAGCCGAGCATCAACGTGCGTGCCTTTCAGGACGCCAGG TTTACTTGGTTGACCATGGGAACATTCATCATGGAGCTGGAAGTCTTTGGCTGCCTGGGTCTCTACCCGACTTAC GTTGTAATGCAGGGATTTGGCACTACCACCAGCATCATACTTCTGTCAATCTTGAACGTGTTCTCTACCATCGGT CGCCTTGTCGCCGGCGGCGTCGCAGACAAGTATGGCCGAATCAACACGCAGATAGGACTGCTCGGTCTAGGTGCC GTGGCCGTCTTTGTCATTTGGCTACCGTTCGGAAACAAACTGGCGGGCCTCTATATTTTCAGCTGCGTGTACGGC TTCGCATCCGGTTCCTTCATTAGTCTTGCGCCAGCTTGCATCGGGCAAATTTCCAAAGCCAGCGAGGTGGGGGGT AGATTCGGGGTCTGCTATCTGACCGTCAGCTTTGCCACTTTGATTAGTATCCCGATTGGTGGTGAGATGATTGAG ACGGTCGGAAAGCAGGCCATGGTGGCCTTTCTCGGTGCCGTTCTGGTCATCGCAATGGGCATGTTCTCCATGGCG CGGTGGTCGTGCCTTAATTACCGATGGCGATGGCAGGCTAAAATCTAG |
| Transcript | >Ani_SJS100_1|g4071.t1 ATGGCCATCGAGCAAAAGTCGGCCACCTCGATCACCGAGCAGCCCTGGCGCTCAACAGACTTGCAAGGCCCGTCT GACCTCAGCACCGCGCATTCCATTGCCAGCTATGGAAGACCCCGATCATTCGACATCGTTGAACCGCCGGCCCAG CTCTCCACAAACACCTTTCACATCCGTGATTCTGTCCCCGACGATGTCTTTCCAGATGGTGGGACCCGGTCATGG TTTGTCGTTTTGGGATCATTTTTCCTACTGATGAGCAGTTACGGCATGATGAACTCTACTGGTGTCCTACAGAGT TATTTCGCCAGCAACCAACTCTCGGACTACACCAGTAGTGTCATCGGCTGGATCCCAGGTCTATTTGTCTTCTGT GGCCTGGGCTTGGGTGCCCAAATTGGTCCGATGTTCGACAGGTACGGTCCTACGGGTATCCTTATTGCTGGGACG GCCTGCTACGTCGCGGGTCTGCTACTAATGGCCGAATGCCACCTCTACTGGCAATTTATCCTAACCTTTGGCGTA CTCACTGGCATGGGCGCCGCTCTACTGAGCACAGCCGCCATTTCTGCTGTCCCTCATTGGTTCGATCGCCGAGTT GGCTTGGCCATGGGCACGGCAATGGCCGGAGCGGGAGTTGGGGGAGTGGCGTTTCCCTGGGTCCTCCGAGCAGGG TTTAAGGACCTTGGGTATAAGTGGACCATGCGGCTGCTTGCATTGATTGTGGGGACCATGTGTGCGATTGGAATT GCTTTTGTTCGTTCTCGTCTACCAAGAAGCCAGAGTAAGCCGAGCATCAACGTGCGTGCCTTTCAGGACGCCAGG TTTACTTGGTTGACCATGGGAACATTCATCATGGAGCTGGAAGTCTTTGGCTGCCTGGGTCTCTACCCGACTTAC GTTGTAATGCAGGGATTTGGCACTACCACCAGCATCATACTTCTGTCAATCTTGAACGTGTTCTCTACCATCGGT CGCCTTGTCGCCGGCGGCGTCGCAGACAAGTATGGCCGAATCAACACGCAGATAGGACTGCTCGGTCTAGGTGCC GTGGCCGTCTTTGTCATTTGGCTACCGTTCGGAAACAAACTGGCGGGCCTCTATATTTTCAGCTGCGTGTACGGC TTCGCATCCGGTTCCTTCATTAGTCTTGCGCCAGCTTGCATCGGGCAAATTTCCAAAGCCAGCGAGGTGGGGGGT AGATTCGGGGTCTGCTATCTGACCGTCAGCTTTGCCACTTTGATTAGTATCCCGATTGGTGGTGAGATGATTGAG ACGGTCGGAAAGCAGGCCATGGTGGCCTTTCTCGGTGCCGTTCTGGTCATCGCAATGGGCATGTTCTCCATGGCG CGGTGGTCGTGCCTTAATTACCGATGGCGATGGCAGGCTAAAATCTAG |
| Gene | >Ani_SJS100_1|g4071.t1 ATGGCCATCGAGCAAAAGTCGGCCACCTCGATCACCGAGCAGCCCTGGCGCTCAACAGACTTGCAAGGCCCGTCT GACCTCAGCACCGCGCATTCCATTGCCAGCTATGGAAGACCCCGATCATTCGACATCGTTGAACCGCCGGCCCAG CTCTCCACAAACACCTTTCACATCCGTGATTCTGTCCCCGACGATGTCTTTCCAGATGGTGGGACCCGGTCATGG TTTGTCGTTTTGGGATCATTTTTCCTACTGATGAGCAGTTACGGCATGATGAACTCTACTGGTGTCCTACAGAGT TATTTCGCCAGCAACCAACTCTCGGACTACACCAGTAGTGTCATCGGCTGGATCCCAGGTCTATTTGTCTTCTGT GGCCTGGGCTTGGGTGCCCAAATTGGTCCGATGTTCGACAGGTACGGTCCTACGGGTATCCTTATTGCTGGGACG GCCTGCTACGTCGCGGGTCTGCTACTAATGGCCGAATGCCACCTCTACTGGCAATTTATCCTAACCTTTGGCGTA CTCACTGGCATGGGCGCCGCTCTACTGAGCACAGCCGCCATTTCTGCTGTCCCTCATTGGTTCGATCGCCGAGTT GGCTTGGCCATGGGCACGGCAATGGCCGGAGCGGGAGTTGGGGGAGTGGCGTTTCCCTGGGTCCTCCGAGCAGGG TTTAAGGACCTTGGGTATAAGTGGACCATGCGGCTGCTTGCATTGATTGTGGGGACCATGTGTGCGATTGGAATT GCTTTTGTTCGTTCTCGTCTACCAAGAAGCCAGAGTAAGCCGAGCATCAACGTGCGTGCCTTTCAGGACGCCAGG TTTACTTGGTTGACCATGGGAACATTCAGTAAGTCGAAGATACTGCTGAGTGTCTGGTAGAGTAATGCCAGTCTG CTAATGATCTGTAGTCATGGAGCTGGAAGTCTTTGGCTGCCTGGGTCTCTACCCGACTTACGTTGTAATGCAGGG ATTTGGCACTACCACCAGCATCATACTTCTGTCAATCTTGAACGTGTAAGGGCCGACATGATCTCATGGCTTTGA ATAATCCGGTCCAAATCTGATCACAGTGTTTTAGGTTCTCTACCATCGGTCGCCTTGTCGCCGGCGGCGTCGCAG ACAAGTATGGCCGAATCAACACGCAGATAGGACTGCTCGGTCTAGGTGCCGTGGCCGTCTTTGTCATTTGGCTAC CGTTCGGAAACAAACTGGCGGGCCTCTATATTTTCAGCTGCGTGTACGGCTTCGCATCCGGTTCCTTCATTAGTC TTGCGCCAGCTTGCATCGGGCAAATTTCCAAAGCCAGCGAGGTGGGGGGTAGATTCGGGGTCTGCTATCTGACCG TCAGCTTTGCGTATGCCGCACGAACTGTTGTAAGAGTGCATGTTACTAACATATAACAGCACTTTGATTAGTATC CCGATTGGTGGTGAGATGATTGAGACGGTCGGAAAGCAGGCCATGGTGGCCTTTCTCGGTGCCGTTCTGGTCATC GCAATGGGCATGTTCTCCATGGCGCGGTGGTCGTGCCTTAATTACCGATGGCGATGGCAGGCTAAAATCTAG |