© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ani_SJS100_1|g407.t1 |
| Gene name | |
| Location | scaffold_001:1332101..1333731 |
| Strand | + |
| Gene length (bp) | 1630 |
| Transcript length (bp) | 1380 |
| Coding sequence length (bp) | 1380 |
| Protein length (aa) | 460 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF20511 | PMI_typeI_cat | Phosphomannose isomerase type I, catalytic domain | 1.3E-59 | 5 | 151 |
| PF20512 | PMI_typeI_hel | Phosphomannose isomerase type I, helical insertion domain | 2.4E-23 | 167 | 272 |
| PF01238 | PMI_typeI_C | Phosphomannose isomerase type I C-terminal | 8.0E-19 | 360 | 409 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0008270 | zinc ion binding | Yes |
| GO:0005975 | carbohydrate metabolic process | Yes |
| GO:0004476 | mannose-6-phosphate isomerase activity | Yes |
| GO:0046872 | metal ion binding | No |
| GO:0003674 | molecular_function | No |
| GO:0046914 | transition metal ion binding | No |
| GO:0043167 | ion binding | No |
| GO:0005488 | binding | No |
| GO:0071704 | organic substance metabolic process | No |
| GO:0016853 | isomerase activity | No |
| GO:0003824 | catalytic activity | No |
| GO:0008152 | metabolic process | No |
| GO:0016861 | intramolecular oxidoreductase activity, interconverting aldoses and ketoses | No |
| GO:0044238 | primary metabolic process | No |
| GO:0043169 | cation binding | No |
| GO:0016860 | intramolecular oxidoreductase activity | No |
| GO:0008150 | biological_process | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 11 | 0.45 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS100_1|g407.t1 MQVPLLRLQCGVNSYDWGKIGHESAAAKYAAITAGSDFSIEPEKPYAELWMGTHPSLPSKDVETQRTLLDMVQDN QALISKEVSERYGGKLPFLFKVLSVQKALSIQAHPNKKLAEKLHARDARNYPDDNHKPEMTIAITPFEGLCGFRP LAEIVHFLNAVAPLRELVGTQAVNQFESVVKGSEDSQDSDKMARNKDALRSLFTSLMKSSPESIEAATQKLISAA QDSPDTFATSTSTPETNPSNPAELAAIIARLNGQFPNDIGLFVFFFLNFVKLAPGEAMFLKADDIHAYISGDIIE CMASSDNVVRAGFTPKFKDVDTLTEMLTYSYAPIEEQKLEPTDYPYAVLNASAYSSGSSSLLYDPPIEEFSVVKT DLKRAGAKATFDALVGPSILICTGGTGKITVGHKTEEVKEGYVFFVGANAECIVESTGSGEEDVFTTYKAFCDLT GKEDMVNGN* |
| Coding | >Ani_SJS100_1|g407.t1 ATGCAGGTACCGTTGCTTCGCCTTCAGTGTGGTGTCAACAGCTATGACTGGGGCAAGATTGGTCATGAGTCTGCT GCCGCAAAGTATGCCGCCATTACTGCAGGCTCCGATTTCTCCATAGAACCTGAGAAGCCGTATGCAGAGTTGTGG ATGGGCACCCATCCTTCCCTTCCCTCCAAAGATGTCGAAACCCAGCGAACCCTCCTCGATATGGTCCAGGATAAC CAGGCATTGATCTCCAAGGAAGTGAGCGAGCGATATGGAGGGAAATTGCCTTTCCTTTTCAAGGTTCTTTCTGTT CAAAAGGCTCTCAGTATCCAAGCCCATCCGAATAAGAAACTGGCTGAAAAGCTTCATGCCCGGGACGCCCGAAAC TATCCAGATGATAATCACAAACCCGAAATGACAATTGCGATCACCCCGTTCGAAGGACTGTGCGGCTTCCGACCG CTGGCCGAAATCGTTCACTTCCTTAACGCAGTCGCCCCTCTCCGCGAGTTAGTCGGCACGCAAGCAGTGAATCAA TTCGAGAGTGTTGTCAAGGGATCTGAAGACTCGCAGGATTCTGACAAAATGGCAAGAAACAAGGACGCGTTACGC TCCCTATTCACATCGCTAATGAAGTCATCACCGGAAAGCATTGAGGCTGCCACCCAGAAGCTGATCTCTGCGGCT CAGGATTCTCCTGATACATTTGCTACTTCTACCAGCACTCCGGAGACGAATCCGAGCAACCCTGCCGAATTGGCT GCCATTATCGCTCGACTTAACGGACAATTCCCTAACGACATCGGGCTATTCGTGTTCTTCTTCCTGAATTTTGTC AAGCTGGCACCAGGTGAAGCCATGTTCTTGAAGGCTGATGACATCCATGCATACATCTCTGGAGACATTATCGAA TGCATGGCGTCGTCTGATAACGTTGTGCGGGCGGGCTTCACTCCCAAGTTCAAGGACGTTGATACACTCACCGAA ATGCTGACATACTCCTATGCGCCAATTGAAGAGCAAAAGCTGGAGCCGACCGACTATCCATATGCCGTTCTCAAT GCCTCCGCCTACTCAAGTGGTTCATCGTCTCTTCTCTACGACCCTCCGATTGAAGAGTTTAGTGTGGTCAAGACG GATCTGAAGAGGGCTGGGGCCAAAGCAACTTTCGACGCACTGGTGGGTCCCAGCATCCTGATATGCACAGGCGGA ACTGGGAAGATTACGGTCGGCCACAAGACTGAGGAAGTGAAGGAAGGCTATGTATTCTTTGTGGGAGCCAACGCC GAGTGTATCGTCGAAAGTACGGGCAGTGGAGAGGAGGATGTGTTTACCACATATAAGGCATTCTGTGATCTGACG GGCAAGGAGGACATGGTGAATGGAAACTAG |
| Transcript | >Ani_SJS100_1|g407.t1 ATGCAGGTACCGTTGCTTCGCCTTCAGTGTGGTGTCAACAGCTATGACTGGGGCAAGATTGGTCATGAGTCTGCT GCCGCAAAGTATGCCGCCATTACTGCAGGCTCCGATTTCTCCATAGAACCTGAGAAGCCGTATGCAGAGTTGTGG ATGGGCACCCATCCTTCCCTTCCCTCCAAAGATGTCGAAACCCAGCGAACCCTCCTCGATATGGTCCAGGATAAC CAGGCATTGATCTCCAAGGAAGTGAGCGAGCGATATGGAGGGAAATTGCCTTTCCTTTTCAAGGTTCTTTCTGTT CAAAAGGCTCTCAGTATCCAAGCCCATCCGAATAAGAAACTGGCTGAAAAGCTTCATGCCCGGGACGCCCGAAAC TATCCAGATGATAATCACAAACCCGAAATGACAATTGCGATCACCCCGTTCGAAGGACTGTGCGGCTTCCGACCG CTGGCCGAAATCGTTCACTTCCTTAACGCAGTCGCCCCTCTCCGCGAGTTAGTCGGCACGCAAGCAGTGAATCAA TTCGAGAGTGTTGTCAAGGGATCTGAAGACTCGCAGGATTCTGACAAAATGGCAAGAAACAAGGACGCGTTACGC TCCCTATTCACATCGCTAATGAAGTCATCACCGGAAAGCATTGAGGCTGCCACCCAGAAGCTGATCTCTGCGGCT CAGGATTCTCCTGATACATTTGCTACTTCTACCAGCACTCCGGAGACGAATCCGAGCAACCCTGCCGAATTGGCT GCCATTATCGCTCGACTTAACGGACAATTCCCTAACGACATCGGGCTATTCGTGTTCTTCTTCCTGAATTTTGTC AAGCTGGCACCAGGTGAAGCCATGTTCTTGAAGGCTGATGACATCCATGCATACATCTCTGGAGACATTATCGAA TGCATGGCGTCGTCTGATAACGTTGTGCGGGCGGGCTTCACTCCCAAGTTCAAGGACGTTGATACACTCACCGAA ATGCTGACATACTCCTATGCGCCAATTGAAGAGCAAAAGCTGGAGCCGACCGACTATCCATATGCCGTTCTCAAT GCCTCCGCCTACTCAAGTGGTTCATCGTCTCTTCTCTACGACCCTCCGATTGAAGAGTTTAGTGTGGTCAAGACG GATCTGAAGAGGGCTGGGGCCAAAGCAACTTTCGACGCACTGGTGGGTCCCAGCATCCTGATATGCACAGGCGGA ACTGGGAAGATTACGGTCGGCCACAAGACTGAGGAAGTGAAGGAAGGCTATGTATTCTTTGTGGGAGCCAACGCC GAGTGTATCGTCGAAAGTACGGGCAGTGGAGAGGAGGATGTGTTTACCACATATAAGGCATTCTGTGATCTGACG GGCAAGGAGGACATGGTGAATGGAAACTAG |
| Gene | >Ani_SJS100_1|g407.t1 ATGCAGGTACCGTTGCTTCGCCTTCAGTGTGGTGAGTATTCATTCCCCCGAGCCTTCAACTCGAAATTAGAGAAT AATGTCACTAATAGTCCGTCTTCTTTATCCTCAGGTGTCAACAGCTATGACTGGGGTAGGACATCCCCGCATCCT GGATTGGTCCGCCCGTTGCGTTTGCTGAAGCTGGTCTAGGCAAGATTGGTCATGAGTCTGCTGCCGCAAAGTATG CCGCCATTACTGCAGGCTCCGATTTCTCCATAGAACCTGAGAAGCCGTATGCAGAGGTTCGCTCCCTGAATTCTT GATGTTCTCATGGCGGTAAACTGACCCGGTGACGTATAGTTGTGGATGGGCACCCATCCTTCCCTTCCCTCCAAA GATGTCGAAACCCAGCGAACCCTCCTCGATATGGTCCAGGATAACCAGGCATTGATCTCCAAGGAAGTGAGCGAG CGATATGGAGGGAAATTGCCTTTCCTTTTCAAGGTTCTTTCTGTTCAAAAGGCTCTCAGTATCCAAGCCCATCCG AATAAGAAACTGGCTGAAAAGCTTCATGCCCGGGACGCCCGAAACTATCCAGGTAACCTATATAATTCTATCTGA TAACAATCGCAACTCTGATCATCGCTTTATAGATGATAATCACAAACCCGAAATGACAATTGCGATCACCCCGTT CGAAGGACTGTGCGGCTTCCGACCGCTGGCCGAAATCGTTCACTTCCTTAACGCAGTCGCCCCTCTCCGCGAGTT AGTCGGCACGCAAGCAGTGAATCAATTCGAGAGTGTTGTCAAGGGATCTGAAGACTCGCAGGATTCTGACAAAAT GGCAAGAAACAAGGACGCGTTACGCTCCCTATTCACATCGCTAATGAAGTCATCACCGGAAAGCATTGAGGCTGC CACCCAGAAGCTGATCTCTGCGGCTCAGGATTCTCCTGATACATTTGCTACTTCTACCAGCACTCCGGAGACGAA TCCGAGCAACCCTGCCGAATTGGCTGCCATTATCGCTCGACTTAACGGACAATTCCCTAACGACATCGGGCTATT CGTGTTCTTCTTCCTGAATTTTGTCAAGCTGGCACCAGGTGAAGCCATGTTCTTGAAGGCTGATGACATCCATGC ATACATCTCTGGAGACATTATCGAATGCATGGCGTCGTCTGATAACGTTGTGCGGGCGGGCTTCACTCCCAAGTT CAAGGACGTTGATACACTCACCGAAATGCTGACATACTCCTATGCGCCAATTGAAGAGCAAAAGCTGGAGCCGAC CGACTATCCATATGCCGTTCTCAATGCCTCCGCCTACTCAAGTGGTTCATCGTCTCTTCTCTACGACCCTCCGAT TGAAGAGTTTAGTGTGGTCAAGACGGATCTGAAGAGGGCTGGGGCCAAAGCAACTTTCGACGCACTGGTGGGTCC CAGCATCCTGATATGCACAGGCGGAACTGGGAAGATTACGGTCGGCCACAAGACTGAGGAAGTGAAGGAAGGCTA TGTATTCTTTGTGGGAGCCAACGCCGAGTGTATCGTCGAAAGTACGGGCAGTGGAGAGGAGGATGTGTTTACCAC ATATAAGGCATTCTGTGATCTGACGGGCAAGGAGGACATGGTGAATGGAAACTAG |