Protein ID | Ani_SJS100_1|g4057.t1 |
Gene name | |
Location | scaffold_019:412299..413939 |
Strand | - |
Gene length (bp) | 1640 |
Transcript length (bp) | 1575 |
Coding sequence length (bp) | 1575 |
Protein length (aa) | 525 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF20179 | MSS51_C | MSS51 C-terminal domain | 1.3E-43 | 266 | 495 |
PF13824 | zf-Mss51 | Zinc-finger of mitochondrial splicing suppressor 51 | 8.0E-28 | 135 | 212 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 11 | 0.45 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ani_SJS100_1|g4057.t1 MTGEYTCGRCLQVLRRRAVVQNSVARWHHVTSPRRGGYGIPASCVRSLSSRSSASFKTKPLQAPVQQNGLSSNLS ASSIASQNVKSMVQKATSATSTASPEARALLKPNNLFHSFSQSPAAAIRQRAAFIKQNAFCPHPSHQQTRLPLSP HDPESRKSQVTSESLPPAHSHFECPDCGVPIYCSEGHWMDDFEAHLEICETIRQINEDDHDLHSGRFFPEFSYPG LQDDNFVINMTNWDTFLYTREFEAINDDRSMRQVTRMLTYPLTIGSVLHELSPYNVRKEGRLTVEGLKSVSALRY TLHPPKTGEGVDIQGLRLKAPPVRIFILGARAESSLPREVWLQLSYIFPRSLIHLIFIGPESMANRDDEFPLPER TSENPFGGIVEDRLGGQFKITTYVDYFHTMYKAQYFQPFDPYLDCFMLFHPGLGHPASSHEWEETLPQLLETKVP IISTGYTQWDMERDINWVNEKCAGEFDILLEPGENVFRSLRWDLNDLDPHDVSCGNWGLWAFRGKRYEATFKDA* |
Coding | >Ani_SJS100_1|g4057.t1 ATGACCGGCGAATATACTTGTGGGCGCTGTCTGCAGGTGCTCCGGCGAAGGGCTGTTGTCCAGAACTCCGTGGCT CGCTGGCATCATGTCACCAGTCCAAGGCGAGGGGGATACGGCATTCCCGCTTCATGCGTGCGGAGCTTGAGCTCT CGGAGCAGTGCTTCCTTTAAGACCAAGCCTCTGCAGGCACCAGTCCAACAGAATGGTTTGTCGTCCAACTTGTCG GCCTCCTCAATTGCATCACAAAATGTCAAGTCGATGGTGCAGAAGGCCACATCTGCCACATCTACCGCCTCGCCA GAGGCCCGGGCACTTCTGAAGCCGAACAACCTGTTTCACTCCTTCTCCCAGTCTCCAGCAGCTGCAATCCGACAG CGTGCGGCTTTTATCAAGCAGAACGCCTTCTGCCCCCATCCGAGTCATCAGCAGACTCGTTTGCCTCTCTCGCCC CACGATCCTGAGTCGCGCAAGAGCCAGGTGACGTCGGAAAGTCTGCCGCCCGCGCACTCTCATTTCGAATGTCCC GACTGCGGTGTTCCGATTTACTGCTCCGAGGGCCATTGGATGGACGATTTTGAGGCCCATCTGGAGATTTGTGAG ACAATTCGACAGATCAATGAAGACGACCATGATCTACACTCCGGTCGGTTTTTCCCGGAGTTCTCGTACCCCGGA CTGCAGGACGATAACTTTGTCATTAACATGACGAATTGGGACACTTTCCTGTACACACGAGAATTTGAGGCGATT AACGATGACCGAAGCATGCGACAAGTAACGAGAATGCTCACGTACCCTCTCACAATCGGAAGTGTCCTGCATGAG TTGAGCCCTTACAATGTCCGGAAAGAAGGCCGGCTTACCGTGGAGGGTCTTAAGAGTGTCAGTGCGCTCCGGTAC ACCCTTCACCCGCCCAAGACCGGAGAGGGTGTCGACATCCAAGGACTACGACTTAAGGCTCCTCCAGTGCGCATA TTTATTCTGGGGGCTCGCGCTGAGTCCTCGTTGCCGCGTGAAGTTTGGCTTCAACTTAGCTACATATTCCCGCGC TCCCTGATCCATTTGATCTTCATCGGACCGGAGAGTATGGCCAACCGGGATGATGAATTCCCGCTGCCCGAGCGC ACGTCCGAGAATCCCTTCGGTGGTATCGTGGAGGACAGACTTGGAGGACAATTCAAGATTACGACGTACGTTGAC TACTTCCACACGATGTACAAAGCGCAGTACTTCCAGCCTTTTGATCCCTATCTGGACTGCTTCATGCTCTTCCAC CCGGGTCTGGGACACCCAGCCAGCTCTCACGAATGGGAGGAAACGCTCCCGCAGCTCCTCGAGACCAAGGTCCCG ATCATCAGCACGGGATACACGCAGTGGGATATGGAACGAGACATCAACTGGGTCAACGAGAAATGTGCTGGTGAA TTCGACATTTTGCTTGAACCTGGTGAGAACGTTTTCCGCAGTTTGCGCTGGGATCTCAACGATCTGGATCCCCAT GACGTGTCCTGTGGTAACTGGGGTCTCTGGGCCTTCAGAGGAAAGAGATACGAGGCGACTTTCAAGGATGCATAG |
Transcript | >Ani_SJS100_1|g4057.t1 ATGACCGGCGAATATACTTGTGGGCGCTGTCTGCAGGTGCTCCGGCGAAGGGCTGTTGTCCAGAACTCCGTGGCT CGCTGGCATCATGTCACCAGTCCAAGGCGAGGGGGATACGGCATTCCCGCTTCATGCGTGCGGAGCTTGAGCTCT CGGAGCAGTGCTTCCTTTAAGACCAAGCCTCTGCAGGCACCAGTCCAACAGAATGGTTTGTCGTCCAACTTGTCG GCCTCCTCAATTGCATCACAAAATGTCAAGTCGATGGTGCAGAAGGCCACATCTGCCACATCTACCGCCTCGCCA GAGGCCCGGGCACTTCTGAAGCCGAACAACCTGTTTCACTCCTTCTCCCAGTCTCCAGCAGCTGCAATCCGACAG CGTGCGGCTTTTATCAAGCAGAACGCCTTCTGCCCCCATCCGAGTCATCAGCAGACTCGTTTGCCTCTCTCGCCC CACGATCCTGAGTCGCGCAAGAGCCAGGTGACGTCGGAAAGTCTGCCGCCCGCGCACTCTCATTTCGAATGTCCC GACTGCGGTGTTCCGATTTACTGCTCCGAGGGCCATTGGATGGACGATTTTGAGGCCCATCTGGAGATTTGTGAG ACAATTCGACAGATCAATGAAGACGACCATGATCTACACTCCGGTCGGTTTTTCCCGGAGTTCTCGTACCCCGGA CTGCAGGACGATAACTTTGTCATTAACATGACGAATTGGGACACTTTCCTGTACACACGAGAATTTGAGGCGATT AACGATGACCGAAGCATGCGACAAGTAACGAGAATGCTCACGTACCCTCTCACAATCGGAAGTGTCCTGCATGAG TTGAGCCCTTACAATGTCCGGAAAGAAGGCCGGCTTACCGTGGAGGGTCTTAAGAGTGTCAGTGCGCTCCGGTAC ACCCTTCACCCGCCCAAGACCGGAGAGGGTGTCGACATCCAAGGACTACGACTTAAGGCTCCTCCAGTGCGCATA TTTATTCTGGGGGCTCGCGCTGAGTCCTCGTTGCCGCGTGAAGTTTGGCTTCAACTTAGCTACATATTCCCGCGC TCCCTGATCCATTTGATCTTCATCGGACCGGAGAGTATGGCCAACCGGGATGATGAATTCCCGCTGCCCGAGCGC ACGTCCGAGAATCCCTTCGGTGGTATCGTGGAGGACAGACTTGGAGGACAATTCAAGATTACGACGTACGTTGAC TACTTCCACACGATGTACAAAGCGCAGTACTTCCAGCCTTTTGATCCCTATCTGGACTGCTTCATGCTCTTCCAC CCGGGTCTGGGACACCCAGCCAGCTCTCACGAATGGGAGGAAACGCTCCCGCAGCTCCTCGAGACCAAGGTCCCG ATCATCAGCACGGGATACACGCAGTGGGATATGGAACGAGACATCAACTGGGTCAACGAGAAATGTGCTGGTGAA TTCGACATTTTGCTTGAACCTGGTGAGAACGTTTTCCGCAGTTTGCGCTGGGATCTCAACGATCTGGATCCCCAT GACGTGTCCTGTGGTAACTGGGGTCTCTGGGCCTTCAGAGGAAAGAGATACGAGGCGACTTTCAAGGATGCATAG |
Gene | >Ani_SJS100_1|g4057.t1 ATGACCGGCGAATATACTTGTGGGCGCTGTCTGCAGGTGCTCCGGCGAAGGGCTGTTGTCCAGAACTCCGTGGCT CGCTGGCATCATGTCACCAGTCCAAGGCGAGGGGGATACGGCATTCCCGCTTCATGCGTGCGGAGCTTGAGCTCT CGGAGCAGTGCTTCCTTTAAGACCAAGCCTCTGCAGGCACCAGTCCAACAGAATGGTTTGTCGTCCAACTTGTCG GCCTCCTCAATTGCATCACAAAATGTCAAGTCGATGGTGCAGAAGGCCACATCTGCCACATCTACCGCCTCGCCA GAGGCCCGGGCACTTCTGAAGCCGAACAACCTGTTTCACTCCTTCTCCCAGTCTCCAGCAGCTGCAATCCGACAG CGTGCGGCTTTTATCAAGCAGAACGCCTTCTGCCCCCATCCGAGTCATCAGCAGACTCGTTTGCCTCTCTCGCCC CACGATCCTGAGTCGCGCAAGAGCCAGGTGACGTCGGAAAGTCTGCCGCCCGCGCACTCTCATTTCGAATGTCCC GACTGCGGTGTTCCGATTTACTGCTCCGAGGGCCATTGGATGGACGATTTTGAGGCCCATCTGGAGATTTGTGAG ACAATTCGACAGATCAATGAAGACGACCATGATCTACACTCCGGTCGGTTTTTCCCGGAGTTCTCGTACCCCGGA CTGCAGGACGATAACTTTGTCATTAACATGACGAATTGGGACACTTTCCTGTACACACGAGAATTTGAGGCGATT AACGATGACCGAAGCATGCGACAAGTAACGAGAATGCTCACGTACCCTCTCACAATCGGAAGTGTCCTGCATGAG TTGAGCCCTTACAATGTCCGGAAAGAAGGCCGGCTTACCGTGGAGGGTCTTAAGAGTGTCAGTGGTAAGTTGAAA AGTCTATAAATATAAAGTTGTAGGACCGCCAGCTAATTGATTGGCTCTATTTAGCGCTCCGGTACACCCTTCACC CGCCCAAGACCGGAGAGGGTGTCGACATCCAAGGACTACGACTTAAGGCTCCTCCAGTGCGCATATTTATTCTGG GGGCTCGCGCTGAGTCCTCGTTGCCGCGTGAAGTTTGGCTTCAACTTAGCTACATATTCCCGCGCTCCCTGATCC ATTTGATCTTCATCGGACCGGAGAGTATGGCCAACCGGGATGATGAATTCCCGCTGCCCGAGCGCACGTCCGAGA ATCCCTTCGGTGGTATCGTGGAGGACAGACTTGGAGGACAATTCAAGATTACGACGTACGTTGACTACTTCCACA CGATGTACAAAGCGCAGTACTTCCAGCCTTTTGATCCCTATCTGGACTGCTTCATGCTCTTCCACCCGGGTCTGG GACACCCAGCCAGCTCTCACGAATGGGAGGAAACGCTCCCGCAGCTCCTCGAGACCAAGGTCCCGATCATCAGCA CGGGATACACGCAGTGGGATATGGAACGAGACATCAACTGGGTCAACGAGAAATGTGCTGGTGAATTCGACATTT TGCTTGAACCTGGTGAGAACGTTTTCCGCAGTTTGCGCTGGGATCTCAACGATCTGGATCCCCATGACGTGTCCT GTGGTAACTGGGGTCTCTGGGCCTTCAGAGGAAAGAGATACGAGGCGACTTTCAAGGATGCATAG |