Protein ID | Ani_SJS100_1|g4021.t1 |
Gene name | |
Location | scaffold_019:290179..292351 |
Strand | + |
Gene length (bp) | 2172 |
Transcript length (bp) | 1803 |
Coding sequence length (bp) | 1803 |
Protein length (aa) | 601 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF00339 | Arrestin_N | Arrestin (or S-antigen), N-terminal domain | 3.2E-12 | 5 | 176 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 44 | 0.45 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ani_SJS100_1|g4021.t1 MSVIIHLDRPHKHFTNLDYLTGKVVLQLHSEAAIGGIQVKLEGESRTRLAGPKNPHNEQSDKKRTEIEVHKILYK VETVFPTAAVFNAETPDRAYTFARGTYEYPFKFKFPFNNSCSIHNSMLTNLNITGLRVEMARDTARHVKKTLPPS LSGFPGMADIKYYVKATVIRPQFYKENIRAITNLNFLPIEPPRTGNPSEETYARRQHQFTNAPNVSKKRSLFSKM SSSSLRDAAGGSPRVSADLRLPNPSILTCNEPIPMRVLVKKLSESYETIFLQMIQVELISYTNIIAHDLRRTESG TWVILSQSNMAVPLGRGGDPADSEWTIDAGLWNGIPLPSTVAPSFETCNVSRTYELEVRVGLTHGSVGNMKPQLI VLPLRMPVKVYSGIAPPKALLDAMAANGQAKPAASPTSPTGSMDSSTRPPMPPRPARPPMPANPEDGYDDAPPSY EDAMAETLSPVDGPRREYNPPDASSERSVEPGADPRSPVGKEPEASAPYSNQEAMSSSETLDMLPESPPESRSGS PPNSPVARQQSVLKIHKAPLLLEEDSPPEYQTIAAGKPQPSHSQVNRVPSQPGARPMNLGVPSRKPVPRSPTLGY * |
Coding | >Ani_SJS100_1|g4021.t1 ATGTCTGTAATCATCCACCTGGACCGGCCACATAAGCATTTCACCAATCTCGACTACCTCACGGGAAAGGTGGTA CTACAATTACACTCTGAAGCTGCAATCGGAGGCATTCAAGTAAAATTAGAAGGCGAAAGTCGGACGCGCCTGGCA GGTCCGAAAAATCCACATAATGAGCAGTCGGATAAGAAACGTACCGAAATCGAGGTTCACAAGATCCTGTACAAA GTCGAAACGGTTTTCCCCACTGCAGCGGTATTCAATGCAGAGACCCCAGACAGGGCTTATACATTTGCAAGAGGG ACGTACGAGTATCCGTTCAAGTTTAAGTTCCCATTCAACAATTCCTGCAGCATACACAATAGCATGCTTACGAAC CTGAACATCACGGGTCTGAGAGTGGAAATGGCCAGAGACACCGCTCGCCATGTGAAAAAGACGCTCCCTCCATCT CTAAGTGGCTTCCCGGGCATGGCCGACATCAAATACTATGTGAAAGCGACGGTTATTCGTCCACAGTTCTACAAG GAGAACATCAGGGCGATCACCAACCTAAACTTCCTTCCCATCGAGCCTCCCAGGACAGGCAACCCGAGCGAAGAA ACTTATGCAAGACGACAACACCAGTTCACAAATGCCCCGAATGTGTCCAAAAAAAGAAGCCTATTCTCGAAGATG TCGAGCAGTTCGCTCCGGGATGCCGCGGGCGGTTCCCCTCGCGTATCCGCTGACCTGCGGCTACCTAACCCGTCA ATCCTGACCTGCAATGAGCCTATACCAATGCGTGTTCTCGTCAAGAAACTGTCAGAGTCTTATGAGACCATTTTC TTGCAGATGATACAGGTTGAGCTGATTTCTTACACAAACATTATTGCTCATGACTTACGGCGCACCGAAAGCGGC ACCTGGGTCATACTAAGTCAGAGTAATATGGCTGTACCTCTGGGAAGAGGCGGAGACCCAGCGGACTCGGAGTGG ACGATCGACGCTGGTTTATGGAATGGCATACCTCTGCCCAGCACGGTAGCGCCGTCATTCGAGACCTGCAATGTC TCACGGACGTACGAGCTCGAAGTTCGAGTGGGCCTGACTCATGGAAGTGTTGGCAACATGAAGCCTCAACTTATC GTTCTTCCGCTGCGGATGCCCGTGAAAGTTTACTCCGGAATTGCTCCCCCGAAAGCACTTCTGGATGCCATGGCG GCCAACGGGCAGGCTAAGCCAGCGGCTAGCCCTACAAGTCCCACCGGATCGATGGATAGTAGTACACGCCCCCCA ATGCCGCCTCGGCCTGCTAGACCACCTATGCCTGCCAACCCTGAGGACGGCTACGACGATGCACCTCCCAGTTAC GAAGATGCCATGGCTGAAACTCTCAGCCCTGTGGATGGCCCCCGTCGAGAGTATAACCCACCAGATGCCTCTTCC GAAAGATCTGTTGAACCTGGAGCTGATCCGCGATCTCCAGTTGGAAAGGAACCTGAGGCGTCTGCACCCTACAGC AATCAGGAAGCGATGTCCTCGTCGGAGACACTCGATATGCTTCCCGAAAGTCCGCCAGAGTCCCGTTCTGGTTCG CCCCCAAATTCTCCCGTTGCGCGTCAACAAAGCGTGCTCAAAATCCACAAGGCTCCCCTTCTCCTAGAGGAGGAT AGCCCTCCCGAATATCAGACGATTGCAGCTGGCAAGCCTCAACCATCCCATAGCCAGGTTAATCGTGTTCCGTCC CAGCCGGGGGCCAGGCCCATGAACCTGGGCGTTCCCAGCAGGAAGCCAGTTCCCCGGAGTCCAACGCTCGGCTAT TGA |
Transcript | >Ani_SJS100_1|g4021.t1 ATGTCTGTAATCATCCACCTGGACCGGCCACATAAGCATTTCACCAATCTCGACTACCTCACGGGAAAGGTGGTA CTACAATTACACTCTGAAGCTGCAATCGGAGGCATTCAAGTAAAATTAGAAGGCGAAAGTCGGACGCGCCTGGCA GGTCCGAAAAATCCACATAATGAGCAGTCGGATAAGAAACGTACCGAAATCGAGGTTCACAAGATCCTGTACAAA GTCGAAACGGTTTTCCCCACTGCAGCGGTATTCAATGCAGAGACCCCAGACAGGGCTTATACATTTGCAAGAGGG ACGTACGAGTATCCGTTCAAGTTTAAGTTCCCATTCAACAATTCCTGCAGCATACACAATAGCATGCTTACGAAC CTGAACATCACGGGTCTGAGAGTGGAAATGGCCAGAGACACCGCTCGCCATGTGAAAAAGACGCTCCCTCCATCT CTAAGTGGCTTCCCGGGCATGGCCGACATCAAATACTATGTGAAAGCGACGGTTATTCGTCCACAGTTCTACAAG GAGAACATCAGGGCGATCACCAACCTAAACTTCCTTCCCATCGAGCCTCCCAGGACAGGCAACCCGAGCGAAGAA ACTTATGCAAGACGACAACACCAGTTCACAAATGCCCCGAATGTGTCCAAAAAAAGAAGCCTATTCTCGAAGATG TCGAGCAGTTCGCTCCGGGATGCCGCGGGCGGTTCCCCTCGCGTATCCGCTGACCTGCGGCTACCTAACCCGTCA ATCCTGACCTGCAATGAGCCTATACCAATGCGTGTTCTCGTCAAGAAACTGTCAGAGTCTTATGAGACCATTTTC TTGCAGATGATACAGGTTGAGCTGATTTCTTACACAAACATTATTGCTCATGACTTACGGCGCACCGAAAGCGGC ACCTGGGTCATACTAAGTCAGAGTAATATGGCTGTACCTCTGGGAAGAGGCGGAGACCCAGCGGACTCGGAGTGG ACGATCGACGCTGGTTTATGGAATGGCATACCTCTGCCCAGCACGGTAGCGCCGTCATTCGAGACCTGCAATGTC TCACGGACGTACGAGCTCGAAGTTCGAGTGGGCCTGACTCATGGAAGTGTTGGCAACATGAAGCCTCAACTTATC GTTCTTCCGCTGCGGATGCCCGTGAAAGTTTACTCCGGAATTGCTCCCCCGAAAGCACTTCTGGATGCCATGGCG GCCAACGGGCAGGCTAAGCCAGCGGCTAGCCCTACAAGTCCCACCGGATCGATGGATAGTAGTACACGCCCCCCA ATGCCGCCTCGGCCTGCTAGACCACCTATGCCTGCCAACCCTGAGGACGGCTACGACGATGCACCTCCCAGTTAC GAAGATGCCATGGCTGAAACTCTCAGCCCTGTGGATGGCCCCCGTCGAGAGTATAACCCACCAGATGCCTCTTCC GAAAGATCTGTTGAACCTGGAGCTGATCCGCGATCTCCAGTTGGAAAGGAACCTGAGGCGTCTGCACCCTACAGC AATCAGGAAGCGATGTCCTCGTCGGAGACACTCGATATGCTTCCCGAAAGTCCGCCAGAGTCCCGTTCTGGTTCG CCCCCAAATTCTCCCGTTGCGCGTCAACAAAGCGTGCTCAAAATCCACAAGGCTCCCCTTCTCCTAGAGGAGGAT AGCCCTCCCGAATATCAGACGATTGCAGCTGGCAAGCCTCAACCATCCCATAGCCAGGTTAATCGTGTTCCGTCC CAGCCGGGGGCCAGGCCCATGAACCTGGGCGTTCCCAGCAGGAAGCCAGTTCCCCGGAGTCCAACGCTCGGCTAT TGA |
Gene | >Ani_SJS100_1|g4021.t1 ATGTCTGTAATCATCCACCTGGACCGGCCACATAAGCATTTCACCAATCTCGACTACCTCACGGGAAAGGTGGTA CTACAATTACACTCTGAAGCTGCAATCGGAGGCATTCAAGTAAAATTAGAAGGCGAAAGTCGGACGCGCCTGGCA GGTCCGAAAAATCCACATAATGAGCAGTCGGATAAGAAACGTACCGAAATCGAGGTTCACAAGGTGCGAATTCTG AGGCATTTCCCTCTGGCCTTTTCCTCTGTTTCCATCCGAGACGCGAAACAAAACATTTGTGTGATGCCCTTCAAT GCAAGCGATACTGACCAGCTGGTGTAGATCCTGTACAAAGTCGAAACGGTTTTCCCCACTGCAGCGGTATTCAAT GCAGAGACCCCAGACAGGGCTTATACATTTGCAAGAGGGACGTACGAGTATCCGTTCAAGTTTAAGGTCAGTATG GCTCGCAGAGTATCACCCGTGACATACAGAACTTATAGTGGCTGTTCAGTTCCCATTCAACAATTCCTGCAGCAT ACACAATAGCATGCTTACGAACCTGAACATCACGGGTCTGAGAGTGGAAATGGCCAGAGACACCGCTCGCCATGT GAAAAAGACGCTCCCTCCATCTCTAAGTGGCTTCCCGGGCATGGCCGACATCAAATACTATGTGAAAGCGACGGT TATTCGTCCACAGTTCTACAAGGAGAACATCAGGGCGGTATGTTGATTTTTTTTTACGAGCGATCGCTGCGATAA GACGATAATCCGCAGCATTCCATGCTGATAATTGGCTTCTAGATCACCAACCTAAACTTCCTTCCCATCGAGCCT CCCAGGACAGGCAACCCGAGCGAAGAAACTTATGCAAGACGACAACACCAGTTCACAAATGCCCCGAATGTGTCC AAAAAAAGAAGCCTATTCTCGAAGATGTCGAGCAGTTCGCTCCGGGATGCCGCGGGCGGTTCCCCTCGCGTATCC GCTGACCTGCGGCTACCTAACCCGTCAATCCTGACCTGCAATGAGCCTATACCAATGCGTGTTCTCGTCAAGAAA CTGTCAGAGTCTTATGAGACCATTTTCTTGCAGATGATACAGGTTGAGCTGATTTCTTACACAAACATTATTGCT CATGACTTACGGCGCACCGAAAGCGGCACCTGGGTCATACTAAGTCAGAGTAATATGGCTGTACCTCTGGGAAGA GGCGGAGACCCAGCGGACTCGGAGTGGACGATCGACGCTGGTTTATGGAATGGCATACCTCTGCCCAGCACGGTA GCGCCGTCATTCGAGACCTGCAATGTCTCACGGACGTACGAGCTCGAAGTTCGAGTGGGCCTGACTCATGGAAGT GTTGGCAACATGAAGGTGAGTTCTTGGCTGCACATTTCTGGACGCTTTGCTCACAACCAGTAGCCTCAACTTATC GTTCTTCCGCTGCGGATGCCCGTGAAAGTTTACTCCGGAATTGCTCCCCCGAAAGCACTTCTGGATGCCATGGCG GCCAACGGGCAGGCTAAGCCAGCGGCTAGCCCTACAAGTCCCACCGGATCGATGGATAGTAGTACACGCCCCCCA ATGCCGCCTCGGCCTGCTAGACCACCTATGCCTGCCAACCCTGAGGACGGCTACGACGATGCACCTCCCAGTTAC GAAGATGCCATGGCTGAAACTCTCAGCCCTGTGGATGGCCCCCGTCGAGAGTATAACCCACCAGATGCCTCTTCC GAAAGATCTGTTGAACCTGGAGCTGATCCGCGATCTCCAGTTGGAAAGGAACCTGAGGCGTCTGCACCCTACAGC AATCAGGAAGCGATGTCCTCGTCGGAGACACTCGATATGCTTCCCGAAAGTCCGCCAGAGTCCCGTTCTGGTTCG CCCCCAAATTCTCCCGTTGCGCGTCAACAAAGCGTGCTCAAAATCCACAAGGCTCCCCTTCTCCTAGAGGAGGAT AGCCCTCCCGAATATCAGACGATTGCAGCTGGCAAGCCTCAACCATCCCATAGCCAGGTTAATCGTGTTCCGTCC CAGCCGGGGGCCAGGCCCATGAACCTGGGCGTTCCCAGCAGGAAGCCAGTTCCCCGGAGTCCAAGTAGGCAAACG TGAAGTTTGCATCATAACGTGCTTTCTATGTTGCAGCTGGGTGCATCTAATGAAATAGCGCTCGGCTATTGA |