Fungal Genomics

at Utrecht University

General Properties

Protein IDAni_SJS100_1|g4018.t1
Gene name
Locationscaffold_019:285812..286406
Strand-
Gene length (bp)594
Transcript length (bp)273
Coding sequence length (bp)273
Protein length (aa) 91

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF15786 PET117 PET assembly of cytochrome c oxidase, mitochondrial 1.6E-19 4 69

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)		 D score
(significance: > 0.45)
No 1 - 18 0.5

Transmembrane Domains

Domain # Start End Length
1 7 26 19

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ani_SJS100_1|g4018.t1
MSRASKLTLAATGLGTAGIIYFVHWAQEQEKIGMHKAVELDMEKQRIRRERQAEFEMQRALEEEYRKLQKTLPGI
VVRMASNGSVKRHNC*
Coding >Ani_SJS100_1|g4018.t1
ATGTCCCGTGCTTCCAAATTGACACTGGCCGCGACTGGTCTCGGTACGGCGGGGATCATCTACTTTGTGCACTGG
GCTCAAGAACAAGAGAAAATTGGAATGCACAAAGCGGTCGAGCTAGACATGGAGAAACAGCGTATCCGCAGGGAA
CGACAGGCGGAGTTCGAGATGCAAAGGGCGCTCGAAGAAGAGTACCGGAAGCTACAGAAGACTTTGCCTGGTATA
GTTGTCCGCATGGCATCTAATGGCTCTGTTAAGCGTCACAACTGCTGA
Transcript >Ani_SJS100_1|g4018.t1
ATGTCCCGTGCTTCCAAATTGACACTGGCCGCGACTGGTCTCGGTACGGCGGGGATCATCTACTTTGTGCACTGG
GCTCAAGAACAAGAGAAAATTGGAATGCACAAAGCGGTCGAGCTAGACATGGAGAAACAGCGTATCCGCAGGGAA
CGACAGGCGGAGTTCGAGATGCAAAGGGCGCTCGAAGAAGAGTACCGGAAGCTACAGAAGACTTTGCCTGGTATA
GTTGTCCGCATGGCATCTAATGGCTCTGTTAAGCGTCACAACTGCTGA
Gene >Ani_SJS100_1|g4018.t1
ATGTCCCGTGCTTCCAAATTGACACTGGCCGCGACTGGTCTCGGTACGGCGGGGATCATCTACTTTGTGCACTGG
GCTCAAGAACAAGAGAAAATTGTATGTCATTGGTGCACTCTGACCAGATTGACTACATTAGCTAATGCATGACTC
GGATTTAGGGAATGCACAAAGCGGTCGAGCTAGACATGGAGAAACAGCGTATCCGCAGGGAACGACAGGCGGAGT
TCGAGATGCAAAGGGCGCTCGAAGAAGAGTACCGGAAGCTACAGAAGGTCTCGCCCAGCGTTGACGAACCAAGCG
GAGGGAAGTCGAATCAAGGACAAACATCATGATACACGACCGCGCGGCTCTTTACGATGCTTAGACTTTGCCTGG
TATGTTCAAGCCCTTGGTGGCTAGCGGTGAACCGTTCTCTAACGACCGAGCAGGTATAGTTGTCCGCATGGCATC
TAATGGCTGTATGCTTGTAGAATATACCCAAAATGTACATTAGAGATCAATATTCATACCCACCTCTGTATACTA
TTGATTCAGCTTGTATCTAGACCACATGCTGTGCTAAAAAAATTAGCTGTTAAGCGTCACAACTGCTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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