Fungal Genomics

at Utrecht University

General Properties

Protein ID	Ani_SJS100_1\|g4.t1
Gene name
Location	scaffold_001:14847..15485
Strand	+
Gene length (bp)	638
Transcript length (bp)	474
Coding sequence length (bp)	474
Protein length (aa)	158

PFAM Domains

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 34	0.5

Transmembrane Domains

Domain #	Start	End	Length
1	13	31	18
2	41	63	22
3	84	106	22
4	111	133	22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Ani_SJS100_1\|g4.t1 MTDRPRLKRRLHIVIASLIALTFILIIARLATPGTPVTRTNIWGIVVCLKAALFLTYQVLTTYKDRFKRWASLKA NMILDIIDTLFWFALFIISIIGASGGHSAASKTLGAFVAILSLVLCGVVGLLSYLCILDYRYFKAHGTANIYAHE EVKAEVV*
Coding	>Ani_SJS100_1\|g4.t1 ATGACCGACCGCCCCCGCCTCAAACGTCGCCTCCACATCGTCATTGCATCTCTCATCGCCCTGACCTTCATCCTC ATTATCGCCCGTCTAGCTACCCCCGGCACACCAGTGACTCGCACCAATATCTGGGGTATAGTAGTGTGCCTCAAA GCCGCCCTCTTCCTCACCTACCAGGTCCTGACAACCTACAAAGACCGCTTCAAGCGATGGGCCAGCCTCAAGGCC AATATGATCTTGGATATCATCGACACGTTGTTTTGGTTCGCCTTGTTTATTATTAGTATCATAGGCGCGAGCGGG GGACATAGTGCTGCTAGTAAGACGTTGGGTGCTTTCGTGGCTATTCTCTCGTTGGTGTTGTGTGGTGTTGTGGGG CTATTATCGTATCTTTGTATCTTGGATTATCGGTATTTCAAAGCTCATGGGACTGCAAATATTTATGCTCATGAG GAAGTGAAGGCGGAGGTTGTGTGA
Transcript	>Ani_SJS100_1\|g4.t1 ATGACCGACCGCCCCCGCCTCAAACGTCGCCTCCACATCGTCATTGCATCTCTCATCGCCCTGACCTTCATCCTC ATTATCGCCCGTCTAGCTACCCCCGGCACACCAGTGACTCGCACCAATATCTGGGGTATAGTAGTGTGCCTCAAA GCCGCCCTCTTCCTCACCTACCAGGTCCTGACAACCTACAAAGACCGCTTCAAGCGATGGGCCAGCCTCAAGGCC AATATGATCTTGGATATCATCGACACGTTGTTTTGGTTCGCCTTGTTTATTATTAGTATCATAGGCGCGAGCGGG GGACATAGTGCTGCTAGTAAGACGTTGGGTGCTTTCGTGGCTATTCTCTCGTTGGTGTTGTGTGGTGTTGTGGGG CTATTATCGTATCTTTGTATCTTGGATTATCGGTATTTCAAAGCTCATGGGACTGCAAATATTTATGCTCATGAG GAAGTGAAGGCGGAGGTTGTGTGA
Gene	>Ani_SJS100_1\|g4.t1 ATGACCGACCGCCCCCGCCTCAAACGTCGCCTCCACATCGTCATTGCATCTCTCATCGCCCTGACCTTCATCCTC ATTATCGCCCGTCTAGCTACCCCCGGCACACCAGTGACTCGCACCAATATCTGGGGTATAGTAGTGGTACTGTCA TTCCTCATACCAAATTCTCAAAGCTCCGCTCACTAGTAAAACTAACAACACAATCGATAAAACAGTGCCTCAAAG CCGCCCTCTTCCTCACCTACCAGGTCCTGACAACCTACAAAGACCGCTTCAAGCGATGGGCCAGCCTCAAGGCCA ATATGATCTTGGATATCATCGACACGTTGTTTTGGTTCGCCTTGTTTATTATTAGTATCATAGGCGCGAGCGGGG GACATAGTGCTGCTAGTAAGACGTTGGGTGCTTTCGTGGCTATTCTCTCGTTGGTGTTGTGGTGAGTATTGTCAT GTCTCTGACTATGTACCGTCTATATCTCATAGGAGTATGGTGGTGCTGACGGATGAATTGAACTGACTGGTTATA GTGGTGTTGTGGGGCTATTATCGTATCTTTGTATCTTGGATTATCGGTATTTCAAAGCTCATGGGACTGCAAATA TTTATGCTCATGAGGAAGTGAAGGCGGAGGTTGTGTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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