Fungal Genomics

at Utrecht University

General Properties

Protein IDAni_SJS100_1|g3976.t1
Gene name
Locationscaffold_019:125789..126493
Strand+
Gene length (bp)704
Transcript length (bp)576
Coding sequence length (bp)576
Protein length (aa) 192

Your browser does not support drawing a protein figure.

PFAM Domains

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)		 D score
(significance: > 0.45)
No 1 - 11 0.5

Transmembrane Domains

Domain # Start End Length
1 12 34 22
2 46 68 22
3 75 97 22
4 156 178 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ani_SJS100_1|g3976.t1
MAPHGLLGATFVCARIIQLCSLVAIIGLTANFIAEIVSNGATPPAIFIGTITVTSIAVIYSFITTILFLDNILHF
LISAILDTLLLIAVIVVSVIIGKPLSYLQCNKLSSDGSSGSSAYTFATHLSSYLEDLSGGTVNYTAWIGASKSVC
LEAKSIWGLCIAMCIMFFFSGVCGLVLWRQKKAAGVEKLDG*
Coding >Ani_SJS100_1|g3976.t1
ATGGCACCCCACGGACTCCTCGGCGCAACCTTCGTCTGCGCGCGTATCATCCAGCTCTGCTCACTCGTCGCTATC
ATCGGCCTAACAGCCAATTTCATTGCTGAGATCGTCTCCAACGGCGCCACGCCCCCAGCTATCTTCATTGGAACT
ATCACAGTGACCAGCATCGCAGTGATATACAGCTTCATCACAACCATCCTCTTCCTCGACAACATCCTACACTTC
CTAATCTCAGCCATCCTCGACACTCTCCTCCTCATCGCCGTGATCGTGGTGTCAGTCATCATCGGAAAGCCGCTA
TCCTATCTGCAATGCAACAAGCTAAGCAGCGACGGTTCAAGCGGGTCATCGGCGTATACGTTCGCGACGCATCTG
AGCAGTTATTTGGAGGATCTGAGTGGCGGGACAGTGAATTACACAGCTTGGATTGGGGCGAGTAAGTCAGTGTGT
TTGGAGGCGAAGTCGATTTGGGGGTTGTGTATTGCTATGTGTATCATGTTCTTCTTTTCAGGCGTTTGCGGGCTC
GTGCTCTGGAGACAGAAGAAAGCGGCGGGTGTGGAGAAGTTGGATGGGTAG
Transcript >Ani_SJS100_1|g3976.t1
ATGGCACCCCACGGACTCCTCGGCGCAACCTTCGTCTGCGCGCGTATCATCCAGCTCTGCTCACTCGTCGCTATC
ATCGGCCTAACAGCCAATTTCATTGCTGAGATCGTCTCCAACGGCGCCACGCCCCCAGCTATCTTCATTGGAACT
ATCACAGTGACCAGCATCGCAGTGATATACAGCTTCATCACAACCATCCTCTTCCTCGACAACATCCTACACTTC
CTAATCTCAGCCATCCTCGACACTCTCCTCCTCATCGCCGTGATCGTGGTGTCAGTCATCATCGGAAAGCCGCTA
TCCTATCTGCAATGCAACAAGCTAAGCAGCGACGGTTCAAGCGGGTCATCGGCGTATACGTTCGCGACGCATCTG
AGCAGTTATTTGGAGGATCTGAGTGGCGGGACAGTGAATTACACAGCTTGGATTGGGGCGAGTAAGTCAGTGTGT
TTGGAGGCGAAGTCGATTTGGGGGTTGTGTATTGCTATGTGTATCATGTTCTTCTTTTCAGGCGTTTGCGGGCTC
GTGCTCTGGAGACAGAAGAAAGCGGCGGGTGTGGAGAAGTTGGATGGGTAG
Gene >Ani_SJS100_1|g3976.t1
ATGGCACCCCACGGACTCCTCGGCGCAACCTTCGTCTGCGCGCGTATCATCCAGCTCTGCTCACTCGTCGCTATC
ATCGGCCTAACAGCCAATTTCATTGCTGAGATCGTCTCCAACGGCGCCACGCCCCCAGCTATCTTCATTGGAACT
ATCACAGTGGTATGTCCTCACCCTCCTTCACTAGGCACCTCCACAACACCACCCCTCTAACCAAACCATGACACC
TAGACCAGCATCGCAGTGATATACAGCTTCATCACAACCATCCTCTTCCTCGACAACATCCTACACTTCCTAATC
TCAGCCATCCTCGACACTCTCCTCCTCATCGCCGTGATCGTGGTGTCAGTCATCATCGGAAAGCCGCTATCCTAT
CTGCAATGCAACAAGCTAAGCAGCGACGGTTCAAGCGGGTCATCGGCGTATACGTTCGCGACGCATCTGAGCAGT
TATTTGGAGGATCTGAGTGGCGGGACAGTGAATTACACAGCTTGGATTGGGGCGAGTAAGTCAGTGTGTTTGGAG
GCGAAGTCGATTTGGGGGTTGTGTATTGCTATGTGGTGAGTGGAATATTTCCAGAGGGGATCCGTAGACCGAGCT
AATGATGGTGTGTGTGCAGTATCATGTTCTTCTTTTCAGGCGTTTGCGGGCTCGTGCTCTGGAGACAGAAGAAAG
CGGCGGGTGTGGAGAAGTTGGATGGGTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail