© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ani_SJS100_1|g3970.t1 |
| Gene name | |
| Location | scaffold_019:104867..106818 |
| Strand | + |
| Gene length (bp) | 1951 |
| Transcript length (bp) | 1749 |
| Coding sequence length (bp) | 1749 |
| Protein length (aa) | 583 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF00854 | PTR2 | POT family | 2.5E-94 | 139 | 523 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0055085 | transmembrane transport | Yes |
| GO:0016020 | membrane | Yes |
| GO:0022857 | transmembrane transporter activity | Yes |
| GO:0110165 | cellular anatomical entity | No |
| GO:0008150 | biological_process | No |
| GO:0005575 | cellular_component | No |
| GO:0051234 | establishment of localization | No |
| GO:0051179 | localization | No |
| GO:0009987 | cellular process | No |
| GO:0005215 | transporter activity | No |
| GO:0006810 | transport | No |
| GO:0003674 | molecular_function | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 56 | 0.45 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 109 | 131 | 22 |
| 2 | 143 | 165 | 22 |
| 3 | 175 | 197 | 22 |
| 4 | 228 | 247 | 19 |
| 5 | 252 | 274 | 22 |
| 6 | 337 | 354 | 17 |
| 7 | 383 | 400 | 17 |
| 8 | 413 | 435 | 22 |
| 9 | 462 | 484 | 22 |
| 10 | 497 | 516 | 19 |
| 11 | 526 | 548 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS100_1|g3970.t1 MSGDHEAEITQPQQQGHGTETIVNEKAAFTEASEKALSPTPDGEEPNAEEVATLRHVAEHLPISAWLVAVVELCE RFTYYGMSGMFQNYVDRPLDGSEGRGALGMGHQGATGLTTFFQFWCYVTPIIGAIVADQYLGKYKTIVVFCIIYL VGLLILVCTSIPTALHHGAGVGGFIVSILIIGLGTGGIKSNVAPLIADQYKRKKMAMSTTKKGERVVIDPSLTIQ RIYMIFYGCINVGSLSLLATPYMEKYIGFWSGYLLCLCMFAVGTMVLIFGRKYYVVRPPQGSIITDAFKALWIMI GNRNMDAPKPSWQAANNGTRTNVPWDDHFIDELKRALVACRVFCFYPIYWVVYGQFSSNFVTQAGQMEGHGIPND LMQNFDPISIIVFIPVLETLVYPLLRRLRIRFRPITRISLGFVVASLAMMYAAIVQHLIYSAGPCYEHPGCAASE VDGSTTGNHVHIAIQTPAYVFIGLSEIFASVSGLEYAYTKAPPSMKSFVQSMYLLTNAFGSALAEALTPAAYDPA IMWMFVGLACASFVAGIIFWLVYHHLNDQEDQLNALDADDPDVPAPPAYEEKKEHEN* |
| Coding | >Ani_SJS100_1|g3970.t1 ATGTCTGGAGATCATGAGGCTGAGATCACTCAGCCGCAACAACAGGGCCACGGCACCGAAACTATTGTGAACGAA AAGGCGGCATTCACCGAGGCCAGCGAAAAGGCTCTCAGTCCCACCCCCGACGGCGAAGAACCCAACGCTGAGGAA GTCGCTACTCTTCGCCATGTTGCCGAGCATCTGCCCATCTCCGCATGGCTTGTCGCCGTTGTCGAGTTGTGCGAG CGTTTCACCTACTACGGAATGTCTGGCATGTTTCAGAACTACGTTGATCGTCCACTGGACGGAAGTGAGGGACGC GGTGCCCTAGGCATGGGCCATCAAGGAGCCACTGGTCTCACCACTTTCTTCCAGTTCTGGTGTTATGTTACTCCC ATCATTGGTGCCATCGTCGCTGATCAGTATCTCGGTAAATACAAGACCATCGTGGTTTTCTGTATCATTTACTTG GTCGGACTCCTCATCCTGGTTTGCACGTCCATCCCGACGGCTCTTCACCATGGAGCCGGTGTTGGTGGCTTCATT GTGTCTATCCTGATCATTGGCCTGGGAACTGGCGGTATCAAGAGTAACGTTGCTCCTCTGATTGCCGACCAGTAC AAGCGCAAAAAGATGGCCATGTCCACCACCAAGAAGGGCGAGCGTGTTGTCATTGACCCTTCCCTTACGATTCAG CGCATTTACATGATCTTCTACGGCTGTATCAACGTGGGATCGCTGTCTCTGTTGGCCACTCCTTACATGGAGAAG TACATTGGCTTCTGGTCCGGTTATCTGCTTTGCCTGTGCATGTTCGCTGTCGGTACCATGGTGCTCATCTTCGGC CGCAAGTACTACGTCGTTCGCCCTCCCCAGGGCTCCATTATCACCGACGCCTTCAAGGCGCTGTGGATCATGATT GGCAACCGCAACATGGATGCTCCCAAGCCCAGCTGGCAGGCGGCCAACAACGGTACCAGGACCAACGTGCCCTGG GATGACCACTTCATCGACGAGCTCAAGCGTGCGCTGGTTGCTTGCCGTGTGTTCTGTTTCTACCCGATCTACTGG GTCGTTTACGGTCAATTCTCCAGCAACTTTGTCACCCAGGCCGGCCAGATGGAGGGTCACGGAATCCCGAACGAC TTGATGCAGAACTTTGATCCTATCTCCATCATTGTCTTCATCCCCGTCCTGGAGACCCTTGTCTATCCCCTGCTG CGTCGCTTGCGCATCCGTTTCCGTCCGATTACCCGTATCTCCCTGGGTTTCGTTGTTGCCTCCTTGGCCATGATG TACGCCGCCATTGTTCAGCACCTCATTTACTCCGCTGGGCCATGCTACGAGCACCCCGGATGTGCTGCTTCGGAG GTTGATGGGTCCACCACCGGCAACCACGTGCACATTGCTATCCAGACGCCTGCCTATGTCTTCATTGGTCTGTCT GAGATTTTCGCGTCGGTGTCTGGATTGGAGTATGCCTACACCAAGGCTCCTCCGTCGATGAAGTCGTTCGTGCAG TCCATGTACCTGCTCACCAACGCCTTCGGTTCCGCTCTGGCCGAGGCACTGACCCCCGCTGCCTATGACCCGGCC ATCATGTGGATGTTCGTGGGTCTGGCTTGCGCTTCGTTCGTTGCCGGTATCATCTTCTGGCTGGTGTACCACCAC CTCAACGACCAGGAAGACCAGCTGAATGCGCTCGACGCAGACGATCCGGATGTTCCTGCCCCGCCGGCCTATGAG GAGAAGAAGGAGCACGAGAACTGA |
| Transcript | >Ani_SJS100_1|g3970.t1 ATGTCTGGAGATCATGAGGCTGAGATCACTCAGCCGCAACAACAGGGCCACGGCACCGAAACTATTGTGAACGAA AAGGCGGCATTCACCGAGGCCAGCGAAAAGGCTCTCAGTCCCACCCCCGACGGCGAAGAACCCAACGCTGAGGAA GTCGCTACTCTTCGCCATGTTGCCGAGCATCTGCCCATCTCCGCATGGCTTGTCGCCGTTGTCGAGTTGTGCGAG CGTTTCACCTACTACGGAATGTCTGGCATGTTTCAGAACTACGTTGATCGTCCACTGGACGGAAGTGAGGGACGC GGTGCCCTAGGCATGGGCCATCAAGGAGCCACTGGTCTCACCACTTTCTTCCAGTTCTGGTGTTATGTTACTCCC ATCATTGGTGCCATCGTCGCTGATCAGTATCTCGGTAAATACAAGACCATCGTGGTTTTCTGTATCATTTACTTG GTCGGACTCCTCATCCTGGTTTGCACGTCCATCCCGACGGCTCTTCACCATGGAGCCGGTGTTGGTGGCTTCATT GTGTCTATCCTGATCATTGGCCTGGGAACTGGCGGTATCAAGAGTAACGTTGCTCCTCTGATTGCCGACCAGTAC AAGCGCAAAAAGATGGCCATGTCCACCACCAAGAAGGGCGAGCGTGTTGTCATTGACCCTTCCCTTACGATTCAG CGCATTTACATGATCTTCTACGGCTGTATCAACGTGGGATCGCTGTCTCTGTTGGCCACTCCTTACATGGAGAAG TACATTGGCTTCTGGTCCGGTTATCTGCTTTGCCTGTGCATGTTCGCTGTCGGTACCATGGTGCTCATCTTCGGC CGCAAGTACTACGTCGTTCGCCCTCCCCAGGGCTCCATTATCACCGACGCCTTCAAGGCGCTGTGGATCATGATT GGCAACCGCAACATGGATGCTCCCAAGCCCAGCTGGCAGGCGGCCAACAACGGTACCAGGACCAACGTGCCCTGG GATGACCACTTCATCGACGAGCTCAAGCGTGCGCTGGTTGCTTGCCGTGTGTTCTGTTTCTACCCGATCTACTGG GTCGTTTACGGTCAATTCTCCAGCAACTTTGTCACCCAGGCCGGCCAGATGGAGGGTCACGGAATCCCGAACGAC TTGATGCAGAACTTTGATCCTATCTCCATCATTGTCTTCATCCCCGTCCTGGAGACCCTTGTCTATCCCCTGCTG CGTCGCTTGCGCATCCGTTTCCGTCCGATTACCCGTATCTCCCTGGGTTTCGTTGTTGCCTCCTTGGCCATGATG TACGCCGCCATTGTTCAGCACCTCATTTACTCCGCTGGGCCATGCTACGAGCACCCCGGATGTGCTGCTTCGGAG GTTGATGGGTCCACCACCGGCAACCACGTGCACATTGCTATCCAGACGCCTGCCTATGTCTTCATTGGTCTGTCT GAGATTTTCGCGTCGGTGTCTGGATTGGAGTATGCCTACACCAAGGCTCCTCCGTCGATGAAGTCGTTCGTGCAG TCCATGTACCTGCTCACCAACGCCTTCGGTTCCGCTCTGGCCGAGGCACTGACCCCCGCTGCCTATGACCCGGCC ATCATGTGGATGTTCGTGGGTCTGGCTTGCGCTTCGTTCGTTGCCGGTATCATCTTCTGGCTGGTGTACCACCAC CTCAACGACCAGGAAGACCAGCTGAATGCGCTCGACGCAGACGATCCGGATGTTCCTGCCCCGCCGGCCTATGAG GAGAAGAAGGAGCACGAGAACTGA |
| Gene | >Ani_SJS100_1|g3970.t1 ATGTCTGGAGATCATGAGGCTGAGATCACTCAGTAAGTTTCCATTGCCTTTTGTCGTTTGTTTTTTTCACACTTC CTGTGGGCTGGCCCATCTTCCGTGTCTGTGACTCAGTGAGTCACTTTTCCGTCACAGCTCACTCGAATCCCGCTC CCTCCTGCCAATACTGATTGATATCCCAGGCCGCAACAACAGGGCCACGGCACCGAAACTATTGTGAACGAAAAG GCGGCATTCACCGAGGCCAGCGAAAAGGCTCTCAGTCCCACCCCCGACGGCGAAGAACCCAACGCTGAGGAAGTC GCTACTCTTCGCCATGTTGCCGAGCATCTGCCCATCTCCGCATGGCTTGTCGCCGTTGTCGAGTTGTGCGAGCGT TTCACCTACTACGGAATGTCTGGCATGTTTCAGAACTACGTTGATCGTCCACTGGACGGAAGTGAGGGACGCGGT GCCCTAGGCATGGGCCATCAAGGAGCCACTGGTCTCACCACTTTCTTCCAGTTCTGGTGTTATGGTTCGTTCACT ACTGCATAAAAGGCTTGGGATCATGGACTGACATTTGCCCAAAGTTACTCCCATCATTGGTGCCATCGTCGCTGA TCAGTATCTCGGTAAATACAAGACCATCGTGGTTTTCTGTATCATTTACTTGGTCGGACTCCTCATCCTGGTTTG CACGTCCATCCCGACGGCTCTTCACCATGGAGCCGGTGTTGGTGGCTTCATTGTGTCTATCCTGATCATTGGCCT GGGAACTGGCGGTATCAAGAGTAACGTTGCTCCTCTGATTGCCGACCAGTACAAGCGCAAAAAGATGGCCATGTC CACCACCAAGAAGGGCGAGCGTGTTGTCATTGACCCTTCCCTTACGATTCAGCGCATTTACATGATCTTCTACGG CTGTATCAACGTGGGATCGCTGTCTCTGTTGGCCACTCCTTACATGGAGAAGTACATTGGCTTCTGGTCCGGTTA TCTGCTTTGCCTGTGCATGTTCGCTGTCGGTACCATGGTGCTCATCTTCGGCCGCAAGTACTACGTCGTTCGCCC TCCCCAGGGCTCCATTATCACCGACGCCTTCAAGGCGCTGTGGATCATGATTGGCAACCGCAACATGGATGCTCC CAAGCCCAGCTGGCAGGCGGCCAACAACGGTACCAGGACCAACGTGCCCTGGGATGACCACTTCATCGACGAGCT CAAGCGTGCGCTGGTTGCTTGCCGTGTGTTCTGTTTCTACCCGATCTACTGGGTCGTTTACGGTCAATTCTCCAG CAACTTTGTCACCCAGGCCGGCCAGATGGAGGGTCACGGAATCCCGAACGACTTGATGCAGAACTTTGATCCTAT CTCCATCATTGTCTTCATCCCCGTCCTGGAGACCCTTGTCTATCCCCTGCTGCGTCGCTTGCGCATCCGTTTCCG TCCGATTACCCGTATCTCCCTGGGTTTCGTTGTTGCCTCCTTGGCCATGATGTACGCCGCCATTGTTCAGCACCT CATTTACTCCGCTGGGCCATGCTACGAGCACCCCGGATGTGCTGCTTCGGAGGTTGATGGGTCCACCACCGGCAA CCACGTGCACATTGCTATCCAGACGCCTGCCTATGTCTTCATTGGTCTGTCTGAGATTTTCGCGTCGGTGTCTGG ATTGGAGTATGCCTACACCAAGGCTCCTCCGTCGATGAAGTCGTTCGTGCAGTCCATGTACCTGCTCACCAACGC CTTCGGTTCCGCTCTGGCCGAGGCACTGACCCCCGCTGCCTATGACCCGGCCATCATGTGGATGTTCGTGGGTCT GGCTTGCGCTTCGTTCGTTGCCGGTATCATCTTCTGGCTGGTGTACCACCACCTCAACGACCAGGAAGACCAGCT GAATGCGCTCGACGCAGACGATCCGGATGTTCCTGCCCCGCCGGCCTATGAGGAGAAGAAGGAGCACGAGAACTG A |