© 2022 - Robin Ohm - Utrecht University - The Netherlands
Built with Python Django and Wagtail
| Protein ID | Ani_SJS100_1|g3916.t1 |
| Gene name | |
| Location | scaffold_018:400611..401645 |
| Strand | - |
| Gene length (bp) | 1034 |
| Transcript length (bp) | 789 |
| Coding sequence length (bp) | 789 |
| Protein length (aa) | 263 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF00175 | NAD_binding_1 | Oxidoreductase NAD-binding domain | 9.4E-20 | 123 | 237 |
| PF00970 | FAD_binding_6 | Oxidoreductase FAD-binding domain | 1.8E-18 | 10 | 104 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0016491 | oxidoreductase activity | Yes |
| GO:0003824 | catalytic activity | No |
| GO:0003674 | molecular_function | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 63 | 0.45 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS100_1|g3916.t1 MFRGFRPTSLRVQNVESLSHNTKRLRFEYPDQTWTSGLQLTSSVLVFCWPQRSWFPAIRPYTPVSSLNQRGFLDL VVKKYPHGKVSSHLHTLQPGDSLYFLGPLPGGYRWSAATANEHSRVYLIAGGSGITPTYQLARGILEDNPNANTK VQVVFGANTAQDLVLKKELDILQQRFADRLQMHYLVSEAGPSTGEADNKDVSYGARVNTSRLRQFFGARREGDEK VFVCGPPGMEKALVGGRTCGRGILEELGFQKDQVHVF* |
| Coding | >Ani_SJS100_1|g3916.t1 ATGTTCCGTGGCTTCAGGCCAACATCTCTGCGTGTGCAAAATGTCGAATCTCTCAGTCACAACACTAAACGCCTT CGATTCGAGTACCCGGACCAAACATGGACATCTGGGTTACAGTTGACGTCATCTGTCTTAGTATTTTGCTGGCCC CAAAGAAGCTGGTTTCCGGCTATTCGACCATACACGCCGGTCAGCAGCCTGAACCAGCGCGGCTTCCTCGATCTC GTGGTAAAGAAATACCCGCACGGAAAGGTGTCTTCACACCTGCACACATTGCAACCAGGCGATTCCCTCTACTTT CTCGGCCCCTTACCTGGCGGATATCGATGGTCCGCAGCGACTGCCAATGAGCACTCGCGGGTATACCTCATCGCT GGCGGATCGGGCATCACCCCCACCTACCAACTCGCCCGAGGCATCCTAGAGGACAATCCGAACGCCAACACCAAA GTGCAAGTGGTATTCGGGGCTAACACCGCGCAGGATCTTGTCCTAAAGAAGGAGTTAGACATCCTGCAGCAGAGG TTTGCCGACCGGCTTCAGATGCATTATCTGGTGAGCGAGGCGGGACCTTCAACAGGAGAAGCGGATAACAAGGAC GTGAGCTACGGGGCGCGGGTGAACACAAGTCGTTTGCGGCAATTTTTCGGGGCGAGGCGAGAAGGAGATGAGAAA GTGTTTGTCTGTGGGCCTCCCGGGATGGAGAAGGCTTTGGTAGGAGGCAGAACTTGCGGACGAGGCATTCTCGAG GAGCTGGGGTTCCAGAAGGACCAGGTCCATGTCTTTTAA |
| Transcript | >Ani_SJS100_1|g3916.t1 ATGTTCCGTGGCTTCAGGCCAACATCTCTGCGTGTGCAAAATGTCGAATCTCTCAGTCACAACACTAAACGCCTT CGATTCGAGTACCCGGACCAAACATGGACATCTGGGTTACAGTTGACGTCATCTGTCTTAGTATTTTGCTGGCCC CAAAGAAGCTGGTTTCCGGCTATTCGACCATACACGCCGGTCAGCAGCCTGAACCAGCGCGGCTTCCTCGATCTC GTGGTAAAGAAATACCCGCACGGAAAGGTGTCTTCACACCTGCACACATTGCAACCAGGCGATTCCCTCTACTTT CTCGGCCCCTTACCTGGCGGATATCGATGGTCCGCAGCGACTGCCAATGAGCACTCGCGGGTATACCTCATCGCT GGCGGATCGGGCATCACCCCCACCTACCAACTCGCCCGAGGCATCCTAGAGGACAATCCGAACGCCAACACCAAA GTGCAAGTGGTATTCGGGGCTAACACCGCGCAGGATCTTGTCCTAAAGAAGGAGTTAGACATCCTGCAGCAGAGG TTTGCCGACCGGCTTCAGATGCATTATCTGGTGAGCGAGGCGGGACCTTCAACAGGAGAAGCGGATAACAAGGAC GTGAGCTACGGGGCGCGGGTGAACACAAGTCGTTTGCGGCAATTTTTCGGGGCGAGGCGAGAAGGAGATGAGAAA GTGTTTGTCTGTGGGCCTCCCGGGATGGAGAAGGCTTTGGTAGGAGGCAGAACTTGCGGACGAGGCATTCTCGAG GAGCTGGGGTTCCAGAAGGACCAGGTCCATGTCTTTTAA |
| Gene | >Ani_SJS100_1|g3916.t1 ATGTTCCGTGGCTTCAGGCCAACATCTCTGCGTGTGCAAAATGTCGAATCTCTCAGTCACAACACTAAACGCCTT CGATTCGAGTACCCGGACCAAACATGGACATCTGGGTTACAGTTGACGTGTATGTACATGGGACAGCCTACCCTT TTTCTTCTTATTCCCCTTTCCTTTTCCGTCGGCCGCAAGTGGTGGAGAACACGCTAATTTTTTCGTTGCAGCATC TGTCTTAGTATTTTGCTGGCCCCAAAGAAGCTGGTTTCCGGCTATTCGACCATACACGCCGGTCAGCAGCCTGAG TATGTCAAACCCTACAGCCGATCTACTCTCTGCCCCGCAACCCCCAAAAGGGCCGTGGCTATGATATTCCCACCT TTTCCATTTCTCCCGGGTGACCCATTTTCAGTCAGTTCCAATGGCTAATATACAATTTCGTGAAAAAACCAGACC AGCGCGGCTTCCTCGATCTCGTGGTAAAGAAATACCCGCACGGAAAGGTGTCTTCACACCTGCACACATTGCAAC CAGGCGATTCCCTCTACTTTCTCGGCCCCTTACCTGGCGGATATCGATGGTCCGCAGCGACTGCCAATGAGCACT CGCGGGTATACCTCATCGCTGGCGGATCGGGCATCACCCCCACCTACCAACTCGCCCGAGGCATCCTAGAGGACA ATCCGAACGCCAACACCAAAGTGCAAGTGGTATTCGGGGCTAACACCGCGCAGGATCTTGTCCTAAAGAAGGAGT TAGACATCCTGCAGCAGAGGTTTGCCGACCGGCTTCAGATGCATTATCTGGTGAGCGAGGCGGGACCTTCAACAG GAGAAGCGGATAACAAGGACGTGAGCTACGGGGCGCGGGTGAACACAAGTCGTTTGCGGCAATTTTTCGGGGCGA GGCGAGAAGGAGATGAGAAAGTGTTTGTCTGTGGGCCTCCCGGGATGGAGAAGGCTTTGGTAGGAGGCAGAACTT GCGGACGAGGCATTCTCGAGGAGCTGGGGTTCCAGAAGGACCAGGTCCATGTCTTTTAA |