© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ani_SJS100_1|g3907.t1 |
| Gene name | |
| Location | scaffold_018:369433..370962 |
| Strand | - |
| Gene length (bp) | 1529 |
| Transcript length (bp) | 1257 |
| Coding sequence length (bp) | 1257 |
| Protein length (aa) | 419 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF01557 | FAA_hydrolase | Fumarylacetoacetate (FAA) hydrolase family | 8.3E-58 | 113 | 407 |
| PF09298 | FAA_hydrolase_N | Fumarylacetoacetase N-terminal | 9.4E-25 | 12 | 107 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0003824 | catalytic activity | Yes |
| GO:0009072 | aromatic amino acid family metabolic process | Yes |
| GO:0004334 | fumarylacetoacetase activity | Yes |
| GO:0008152 | metabolic process | No |
| GO:1901360 | organic cyclic compound metabolic process | No |
| GO:0071704 | organic substance metabolic process | No |
| GO:0016822 | hydrolase activity, acting on acid carbon-carbon bonds | No |
| GO:0044238 | primary metabolic process | No |
| GO:0019752 | carboxylic acid metabolic process | No |
| GO:0016787 | hydrolase activity | No |
| GO:0003674 | molecular_function | No |
| GO:0009987 | cellular process | No |
| GO:0006082 | organic acid metabolic process | No |
| GO:0044281 | small molecule metabolic process | No |
| GO:1901564 | organonitrogen compound metabolic process | No |
| GO:0006520 | cellular amino acid metabolic process | No |
| GO:0044237 | cellular metabolic process | No |
| GO:0043436 | oxoacid metabolic process | No |
| GO:0006807 | nitrogen compound metabolic process | No |
| GO:0008150 | biological_process | No |
| GO:0006725 | cellular aromatic compound metabolic process | No |
| GO:0016823 | hydrolase activity, acting on acid carbon-carbon bonds, in ketonic substances | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 21 | 0.45 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS100_1|g3907.t1 MTLTETPFTIDNLPYGVISTAETPTPRCATVLEDDVIDLSALEKDGYFKSIPGLKGDVFSMPTLNKFASLPKETH VRTRAALVDLLSDNDIRKKYAIPLSTVQNHLPMETKNFSDFYCSFEHTRNCSELFSMKPPASWFVIPSVYNGRQS SLRISGTPIRRPWGVTLDSNKPNDPPAFRPSARFDFELEMGVYLSHPLPPGEILNINNAKDHIFGLVILNDWSAR DIQTYEMAPLGPFHSKGSGTSISPWIVPIEALEGSQCNARVQDPAPLKHLAWKGKEDEATFDIELKARVIRDGKS YTVTETNLKELYWTPYQQVTHLCSAGEGLSTGDIFGTGTITSDRLNAQGEEIGVACLLERKLERNILSEASKDGL DFLADRDEVIMEGWCVNRLTGGKFGFGECRSVILPALKEGSWE* |
| Coding | >Ani_SJS100_1|g3907.t1 ATGACCCTAACTGAGACGCCCTTTACCATCGACAACCTTCCGTACGGTGTGATCTCCACTGCGGAAACACCGACT CCGAGATGCGCAACAGTTTTGGAGGACGATGTCATAGACCTGAGTGCACTTGAGAAAGATGGATACTTCAAGTCT ATTCCAGGATTGAAAGGGGACGTCTTTTCTATGCCAACCCTGAACAAGTTCGCCTCTCTCCCAAAAGAAACCCAT GTACGGACCAGAGCAGCGCTTGTCGACCTTCTCTCAGACAATGATATCCGTAAAAAGTATGCCATTCCCCTCTCA ACGGTACAGAACCACCTCCCAATGGAAACCAAGAACTTCAGCGACTTTTACTGTTCGTTCGAACACACCAGAAAC TGCTCCGAACTCTTCTCTATGAAGCCTCCAGCCTCATGGTTCGTCATCCCCTCCGTCTACAACGGCCGACAAAGC AGCCTCCGCATCTCTGGTACTCCCATCCGACGACCCTGGGGCGTGACGCTCGACTCCAACAAACCCAACGACCCA CCAGCATTCAGACCCAGCGCGCGCTTTGATTTCGAGCTAGAAATGGGCGTCTACCTATCCCATCCACTCCCCCCA GGCGAGATCCTCAACATCAACAACGCAAAGGACCACATCTTCGGCCTAGTCATCCTGAATGACTGGTCTGCAAGG GATATCCAGACGTACGAGATGGCACCATTGGGCCCATTCCACAGCAAGGGCTCGGGAACAAGCATCTCACCATGG ATTGTACCTATCGAGGCACTGGAGGGGTCACAATGTAATGCGAGGGTGCAGGACCCGGCGCCCTTGAAACACCTA GCATGGAAGGGCAAGGAAGATGAGGCAACCTTCGATATTGAGCTGAAAGCGAGAGTTATTCGAGATGGAAAATCC TACACCGTCACCGAAACAAACCTGAAAGAGCTCTACTGGACTCCATACCAGCAGGTGACCCATCTCTGTAGCGCA GGCGAGGGTCTATCGACCGGAGATATCTTCGGTACGGGCACCATAACTAGTGATCGCCTCAACGCCCAAGGAGAA GAAATCGGAGTCGCATGCCTCCTGGAGCGAAAATTAGAAAGAAACATCCTCTCCGAAGCCAGCAAGGACGGTCTC GACTTCCTTGCAGACAGAGACGAAGTCATCATGGAAGGGTGGTGCGTTAACCGTCTCACGGGAGGTAAATTCGGG TTTGGAGAGTGTCGTAGTGTCATCCTTCCTGCTTTGAAGGAGGGGTCTTGGGAGTGA |
| Transcript | >Ani_SJS100_1|g3907.t1 ATGACCCTAACTGAGACGCCCTTTACCATCGACAACCTTCCGTACGGTGTGATCTCCACTGCGGAAACACCGACT CCGAGATGCGCAACAGTTTTGGAGGACGATGTCATAGACCTGAGTGCACTTGAGAAAGATGGATACTTCAAGTCT ATTCCAGGATTGAAAGGGGACGTCTTTTCTATGCCAACCCTGAACAAGTTCGCCTCTCTCCCAAAAGAAACCCAT GTACGGACCAGAGCAGCGCTTGTCGACCTTCTCTCAGACAATGATATCCGTAAAAAGTATGCCATTCCCCTCTCA ACGGTACAGAACCACCTCCCAATGGAAACCAAGAACTTCAGCGACTTTTACTGTTCGTTCGAACACACCAGAAAC TGCTCCGAACTCTTCTCTATGAAGCCTCCAGCCTCATGGTTCGTCATCCCCTCCGTCTACAACGGCCGACAAAGC AGCCTCCGCATCTCTGGTACTCCCATCCGACGACCCTGGGGCGTGACGCTCGACTCCAACAAACCCAACGACCCA CCAGCATTCAGACCCAGCGCGCGCTTTGATTTCGAGCTAGAAATGGGCGTCTACCTATCCCATCCACTCCCCCCA GGCGAGATCCTCAACATCAACAACGCAAAGGACCACATCTTCGGCCTAGTCATCCTGAATGACTGGTCTGCAAGG GATATCCAGACGTACGAGATGGCACCATTGGGCCCATTCCACAGCAAGGGCTCGGGAACAAGCATCTCACCATGG ATTGTACCTATCGAGGCACTGGAGGGGTCACAATGTAATGCGAGGGTGCAGGACCCGGCGCCCTTGAAACACCTA GCATGGAAGGGCAAGGAAGATGAGGCAACCTTCGATATTGAGCTGAAAGCGAGAGTTATTCGAGATGGAAAATCC TACACCGTCACCGAAACAAACCTGAAAGAGCTCTACTGGACTCCATACCAGCAGGTGACCCATCTCTGTAGCGCA GGCGAGGGTCTATCGACCGGAGATATCTTCGGTACGGGCACCATAACTAGTGATCGCCTCAACGCCCAAGGAGAA GAAATCGGAGTCGCATGCCTCCTGGAGCGAAAATTAGAAAGAAACATCCTCTCCGAAGCCAGCAAGGACGGTCTC GACTTCCTTGCAGACAGAGACGAAGTCATCATGGAAGGGTGGTGCGTTAACCGTCTCACGGGAGGTAAATTCGGG TTTGGAGAGTGTCGTAGTGTCATCCTTCCTGCTTTGAAGGAGGGGTCTTGGGAGTGA |
| Gene | >Ani_SJS100_1|g3907.t1 ATGACCCTAACTGAGACGCCCTTTACCATCGACAACCTTCCGTACGGTGTGATCTCCACTGCGGAAACACCGACT CCGAGATGCGCAACAGTTTTGGAGGACGATGTCATAGACCTGAGTGCACTTGAGAAAGATGGATACTTCAAGTCT ATTCCAGGATTGAAAGGGGACGTCTTTTCTATGGTATTTAATAAAGACACTCGCCCCTTTTCAACTTCCCAATAG ATGAGGCCTAACTTCTGCAGCCAACCCTGAACAAGTTCGCCTCTCTCCCAAAAGAAACCCATGTACGGACCAGAG CAGCGCTTGTCGACCTTCTCTCAGACAATGATATCCGTAAAAAGTATGCCATTCCCCTCTCAACGGTACAGAACC ACCTCCCAATGGAAACCAAGAACTTCAGCGACTTTTACTGTTCGTTCGAACACACCAGAAACGTACGTCTACCCC ATTTTACCTCTCTGCATCTAGAAACTTAAATTATCAGTGCTCCGAACTCTTCTCTATGAAGCCTCCAGCCTCATG GTTCGTCATCCCCTCCGTCTACAACGGCCGACAAAGCAGCCTCCGCATCTCTGGTACTCCCATCCGACGACCCTG GGGCGTGACGCTCGACTCCAACAAACCCAACGACCCACCAGCATTCAGACCCAGCGCGCGCTTTGATTTCGAGCT AGAAATGGGCGTCTACCTATCCCATCCACTCCCCCCAGGCGAGATCCTCAACATCAACAACGCAAAGGACCACAT CTTCGGCCTAGTCATCCTGAATGACTGGTCTGCAAGGGATATCCAGACGTACGAGATGGCACCATTGGGCCCATT CCACAGCAAGGGCTCGGGAACAAGCATCTCACCATGGATTGTACCTATCGAGGCACTGGAGGGGTCACAATGTAA TGCGAGGGTGCAGGACCCGGCGCCCTTGAAACACCTAGCATGGAAGGGCAAGGAAGATGAGGCAACCTTCGATAT TGAGCTGAAAGCGAGAGTTATTCGTAAGCTCCTTCCTCACCGCTCCTTATCATGCCCTCCTCTTATCACAATATC ATCACACGACATGCTGACAATTCCACAGGAGATGGAAAATCCTACACCGTCACCGAAACAAACCTGAAAGAGCTC TACTGGACTCCATACCAGCAGGTGACCCATCTCTGTAGCGCAGGCGAGGGTCTATCGACCGGAGATATCTTCGGT ACGGGCACCATAACTAGTGATGTACGTGACACCTCCCATTCCTTTAAAAATATAACAAATAATACTATACGACAA GAATAACTAACTAACAATTGTAAAAGCGCCTCAACGCCCAAGGAGAAGAAATCGGAGTCGCATGCCTCCTGGAGC GAAAATTAGAAAGAAACATCCTCTCCGAAGCCAGCAAGGACGGTCTCGACTTCCTTGCAGACAGAGACGAAGTCA TCATGGAAGGGTGGTGCGTTAACCGTCTCACGGGAGGTAAATTCGGGTTTGGAGAGTGTCGTAGTGTCATCCTTC CTGCTTTGAAGGAGGGGTCTTGGGAGTGA |