Fungal Genomics

at Utrecht University

General Properties

Protein ID	Ani_SJS100_1\|g3900.t1
Gene name
Location	scaffold_018:350389..350974
Strand	-
Gene length (bp)	585
Transcript length (bp)	585
Coding sequence length (bp)	585
Protein length (aa)	195

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF05207	zf-CSL	CSL zinc finger	6.2E-21	121	183
PF00226	DnaJ	DnaJ domain	3.5E-12	11	95

GO

(None)

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 11	0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Ani_SJS100_1\|g3900.t1 MTRSNHPLTQDYYEVLNLPFTETPTALSKQQLKAAYHKALLKYHPDKAPGAIADTSSLPTSDTNSSSHTSHRYTI DEITTAYKTLSDPYLRAEYDRSLRLDRARVAEREKTGTVFHTGLEVVDLEDLACDESDADAALWYRGCRCGDERG FLVTEQDLEREADHGEIVVGCRGCSLWMKVLFAVEDGDGDEQNT*
Coding	>Ani_SJS100_1\|g3900.t1 ATGACCAGATCCAACCACCCCCTCACCCAAGACTACTACGAAGTCCTCAACCTCCCCTTCACCGAGACTCCCACA GCGCTTTCTAAACAACAACTCAAAGCAGCCTACCACAAAGCTCTGCTAAAGTACCACCCGGACAAAGCGCCCGGC GCAATCGCAGACACCAGCAGCCTTCCCACATCAGACACAAACTCTTCATCGCACACAAGCCATCGCTACACAATA GACGAGATCACAACCGCGTACAAAACACTTTCTGATCCATATCTACGCGCTGAATACGATCGGTCGCTGCGACTC GATCGCGCAAGGGTCGCGGAGCGGGAGAAGACAGGGACGGTTTTCCATACGGGGTTGGAGGTTGTTGATCTGGAG GATCTTGCGTGCGATGAGAGTGATGCAGACGCTGCGCTCTGGTATAGAGGGTGTCGGTGTGGCGATGAGAGGGGG TTTTTGGTTACGGAGCAGGACTTGGAGAGGGAGGCGGATCATGGGGAGATTGTTGTTGGGTGTCGGGGGTGTAGC TTGTGGATGAAGGTTTTGTTTGCTGTTGAGGATGGGGATGGCGATGAGCAGAATACTTGA
Transcript	>Ani_SJS100_1\|g3900.t1 ATGACCAGATCCAACCACCCCCTCACCCAAGACTACTACGAAGTCCTCAACCTCCCCTTCACCGAGACTCCCACA GCGCTTTCTAAACAACAACTCAAAGCAGCCTACCACAAAGCTCTGCTAAAGTACCACCCGGACAAAGCGCCCGGC GCAATCGCAGACACCAGCAGCCTTCCCACATCAGACACAAACTCTTCATCGCACACAAGCCATCGCTACACAATA GACGAGATCACAACCGCGTACAAAACACTTTCTGATCCATATCTACGCGCTGAATACGATCGGTCGCTGCGACTC GATCGCGCAAGGGTCGCGGAGCGGGAGAAGACAGGGACGGTTTTCCATACGGGGTTGGAGGTTGTTGATCTGGAG GATCTTGCGTGCGATGAGAGTGATGCAGACGCTGCGCTCTGGTATAGAGGGTGTCGGTGTGGCGATGAGAGGGGG TTTTTGGTTACGGAGCAGGACTTGGAGAGGGAGGCGGATCATGGGGAGATTGTTGTTGGGTGTCGGGGGTGTAGC TTGTGGATGAAGGTTTTGTTTGCTGTTGAGGATGGGGATGGCGATGAGCAGAATACTTGA
Gene	>Ani_SJS100_1\|g3900.t1 ATGACCAGATCCAACCACCCCCTCACCCAAGACTACTACGAAGTCCTCAACCTCCCCTTCACCGAGACTCCCACA GCGCTTTCTAAACAACAACTCAAAGCAGCCTACCACAAAGCTCTGCTAAAGTACCACCCGGACAAAGCGCCCGGC GCAATCGCAGACACCAGCAGCCTTCCCACATCAGACACAAACTCTTCATCGCACACAAGCCATCGCTACACAATA GACGAGATCACAACCGCGTACAAAACACTTTCTGATCCATATCTACGCGCTGAATACGATCGGTCGCTGCGACTC GATCGCGCAAGGGTCGCGGAGCGGGAGAAGACAGGGACGGTTTTCCATACGGGGTTGGAGGTTGTTGATCTGGAG GATCTTGCGTGCGATGAGAGTGATGCAGACGCTGCGCTCTGGTATAGAGGGTGTCGGTGTGGCGATGAGAGGGGG TTTTTGGTTACGGAGCAGGACTTGGAGAGGGAGGCGGATCATGGGGAGATTGTTGTTGGGTGTCGGGGGTGTAGC TTGTGGATGAAGGTTTTGTTTGCTGTTGAGGATGGGGATGGCGATGAGCAGAATACTTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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