Fungal Genomics

at Utrecht University

General Properties

Protein ID	Ani_SJS100_1\|g3899.t1
Gene name
Location	scaffold_018:348456..349662
Strand	-
Gene length (bp)	1206
Transcript length (bp)	999
Coding sequence length (bp)	999
Protein length (aa)	333

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF06201	PITH	PITH domain	4.1E-35	143	313
PF00085	Thioredoxin	Thioredoxin	6.6E-28	8	104
PF04756	OST3_OST6	OST3 / OST6 family, transporter family	2.1E-06	32	86

GO

(None)

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 38	0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Ani_SJS100_1\|g3899.t1 MSTLVQINSREQFSSLLSSSTFVVADFYADWCGPCKAIAPAYEQLASQLSRPNKITFTKVNVDKNQDIARQYGIT AMPTFVLFERGRPTSTVRGANAKELNDLVRKLATEAEKAPEGNDAGSSSGVGWIGAPAPKNYSDISDQYDPKGLE LLNRASEFGTAKTLFDSSKPSSLNNAKGKAGAAPDWVESDTDEQLMLFIPFQSTLKVHSLQITSLPPSADEEVED EDERPMRPRTVSLYTNRSHVLGFDEADDIPAVQTVTIQPEDWDPKTGTAKVDLRFVKFQSVTSLVIFFVDGDGDS EKLRVDRVRIFGEAGEKREMGKLEKIGDEPGE*
Coding	>Ani_SJS100_1\|g3899.t1 ATGTCGACACTCGTGCAAATCAACTCACGCGAGCAATTCAGCTCTCTTCTGAGCTCCTCCACCTTTGTTGTCGCC GACTTCTACGCAGATTGGTGCGGACCATGCAAAGCCATCGCCCCGGCATACGAGCAGCTAGCTTCGCAGCTCTCA CGCCCGAACAAGATCACCTTTACGAAGGTCAACGTTGACAAGAACCAAGACATCGCAAGGCAGTATGGGATTACA GCAATGCCCACCTTCGTCCTCTTCGAACGCGGCCGCCCAACCTCCACCGTCCGCGGCGCCAACGCCAAAGAGCTC AACGACCTAGTGCGCAAGCTCGCCACGGAAGCCGAAAAAGCGCCCGAGGGCAACGACGCCGGCTCCAGCAGCGGC GTAGGCTGGATCGGCGCCCCGGCTCCCAAGAACTACAGCGATATCTCAGACCAATACGACCCGAAGGGTCTGGAG CTACTGAACCGGGCGAGCGAGTTCGGCACGGCCAAGACTCTCTTCGATAGCTCGAAGCCATCCTCCTTGAACAAC GCCAAGGGCAAGGCCGGGGCGGCACCGGATTGGGTGGAGAGTGATACGGATGAGCAGCTGATGCTGTTTATCCCG TTCCAGTCTACGCTGAAGGTGCATTCGTTGCAGATTACCTCGCTTCCGCCATCGGCGGACGAGGAGGTTGAGGAT GAGGACGAGCGGCCGATGCGTCCTCGGACGGTGTCGTTGTATACGAATCGGTCGCATGTGCTGGGATTCGATGAG GCAGATGATATCCCTGCTGTGCAGACGGTTACGATTCAGCCGGAGGATTGGGATCCCAAGACGGGTACGGCGAAG GTGGATTTGCGGTTCGTCAAGTTCCAGAGTGTTACGTCGTTGGTGATTTTCTTTGTGGATGGAGATGGGGATAGC GAGAAGCTGCGGGTTGATCGGGTGCGCATTTTTGGAGAGGCAGGTGAGAAGAGAGAGATGGGTAAGTTGGAGAAG ATTGGTGATGAGCCGGGTGAGTAG
Transcript	>Ani_SJS100_1\|g3899.t1 ATGTCGACACTCGTGCAAATCAACTCACGCGAGCAATTCAGCTCTCTTCTGAGCTCCTCCACCTTTGTTGTCGCC GACTTCTACGCAGATTGGTGCGGACCATGCAAAGCCATCGCCCCGGCATACGAGCAGCTAGCTTCGCAGCTCTCA CGCCCGAACAAGATCACCTTTACGAAGGTCAACGTTGACAAGAACCAAGACATCGCAAGGCAGTATGGGATTACA GCAATGCCCACCTTCGTCCTCTTCGAACGCGGCCGCCCAACCTCCACCGTCCGCGGCGCCAACGCCAAAGAGCTC AACGACCTAGTGCGCAAGCTCGCCACGGAAGCCGAAAAAGCGCCCGAGGGCAACGACGCCGGCTCCAGCAGCGGC GTAGGCTGGATCGGCGCCCCGGCTCCCAAGAACTACAGCGATATCTCAGACCAATACGACCCGAAGGGTCTGGAG CTACTGAACCGGGCGAGCGAGTTCGGCACGGCCAAGACTCTCTTCGATAGCTCGAAGCCATCCTCCTTGAACAAC GCCAAGGGCAAGGCCGGGGCGGCACCGGATTGGGTGGAGAGTGATACGGATGAGCAGCTGATGCTGTTTATCCCG TTCCAGTCTACGCTGAAGGTGCATTCGTTGCAGATTACCTCGCTTCCGCCATCGGCGGACGAGGAGGTTGAGGAT GAGGACGAGCGGCCGATGCGTCCTCGGACGGTGTCGTTGTATACGAATCGGTCGCATGTGCTGGGATTCGATGAG GCAGATGATATCCCTGCTGTGCAGACGGTTACGATTCAGCCGGAGGATTGGGATCCCAAGACGGGTACGGCGAAG GTGGATTTGCGGTTCGTCAAGTTCCAGAGTGTTACGTCGTTGGTGATTTTCTTTGTGGATGGAGATGGGGATAGC GAGAAGCTGCGGGTTGATCGGGTGCGCATTTTTGGAGAGGCAGGTGAGAAGAGAGAGATGGGTAAGTTGGAGAAG ATTGGTGATGAGCCGGGTGAGTAG
Gene	>Ani_SJS100_1\|g3899.t1 ATGTCGACACTCGTGCAAATCAACTCACGCGAGCAATTCAGCTCTCTTCTGAGCTCCTCCACCTTTGTTGTCGCC GACTGTGAGCTCCCATCTGCTGTCCCCCACCTTCCCCTCCCCACCACCACCTATTCACTTCCTCGCAACGTCACT CCATCACTTGCATTCAAACAAACCACATCAAGAACAGCAAACTAACCCATACAAACAAACATAGTCTACGCAGAT TGGTGCGGACCATGCAAAGCCATCGCCCCGGCATACGAGCAGCTAGCTTCGCAGCTCTCACGCCCGAACAAGATC ACCTTTACGAAGGTCAACGTTGACAAGAACCAAGACATCGCAAGGCAGTATGGGATTACAGCGTACGTGCCCATC CCACCGAGCCACCACCATACACAAACAAAATACAATGCAGCTACTAACCCATACTCAAGAATGCCCACCTTCGTC CTCTTCGAACGCGGCCGCCCAACCTCCACCGTCCGCGGCGCCAACGCCAAAGAGCTCAACGACCTAGTGCGCAAG CTCGCCACGGAAGCCGAAAAAGCGCCCGAGGGCAACGACGCCGGCTCCAGCAGCGGCGTAGGCTGGATCGGCGCC CCGGCTCCCAAGAACTACAGCGATATCTCAGACCAATACGACCCGAAGGGTCTGGAGCTACTGAACCGGGCGAGC GAGTTCGGCACGGCCAAGACTCTCTTCGATAGCTCGAAGCCATCCTCCTTGAACAACGCCAAGGGCAAGGCCGGG GCGGCACCGGATTGGGTGGAGAGTGATACGGATGAGCAGCTGATGCTGTTTATCCCGTTCCAGTCTACGCTGAAG GTGCATTCGTTGCAGATTACCTCGCTTCCGCCATCGGCGGACGAGGAGGTTGAGGATGAGGACGAGCGGCCGATG CGTCCTCGGACGGTGTCGTTGTATACGAATCGGTCGCATGTGCTGGGATTCGATGAGGCAGATGATATCCCTGCT GTGCAGACGGTTACGATTCAGCCGGAGGATTGGGATCCCAAGACGGGTACGGCGAAGGTGGATTTGCGGTTCGTC AAGTTCCAGAGTGTTACGTCGTTGGTGATTTTCTTTGTGGATGGAGATGGGGATAGCGAGAAGCTGCGGGTTGAT CGGGTGCGCATTTTTGGAGAGGCAGGTGAGAAGAGAGAGATGGGTAAGTTGGAGAAGATTGGTGATGAGCCGGGT GAGTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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