Protein ID | Ani_SJS100_1|g3898.t1 |
Gene name | |
Location | scaffold_018:332434..333839 |
Strand | + |
Gene length (bp) | 1405 |
Transcript length (bp) | 1239 |
Coding sequence length (bp) | 1239 |
Protein length (aa) | 413 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF02194 | PXA | PXA domain | 3.7E-34 | 100 | 253 |
Orthofinder run ID | 3 |
Orthogroup | 4201 |
Change Orthofinder run |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ani_SJS100_1|g3898.t1 MTSDPLRPGLHPLSHLKAGPTTSSSKSTAVPSSPTLQSFAQAPTRPQPVKYASREDPVNATSDKATIALIRRILC PQAGNHGGATTPQPPEDLLPPLTSSNEVDRQLYALIAIIVKEFVFTWYSKITSDQVLVSELLQVIAHCTRALEQR LREIDVAQLFLDEIPALVERHVTCLSPIPDPSDAQAVAQQRENESIYRQLLVHGMLAVLLPTDDLENASLRTLLG DILADLVLGNAVAGKISEGWFLWDSITKVVDRVGRNEQEEDVATATLGQRSRLHKYGLLSQEAFTEGHSSSHVQV PVPDWIWQALQYAYMIYVTLRFIVIGLFRVASAPPVTASLTPCPPTSNADGTPSCATSKKRPVLDYRLYGMVSQV MDVPQRMPWLCGMLALIQYLILAGPGRLGDTDSVLDR* |
Coding | >Ani_SJS100_1|g3898.t1 ATGACCAGCGACCCTCTCCGCCCGGGCCTCCATCCGCTGTCGCATCTCAAAGCTGGTCCAACCACCTCCAGCTCG AAGTCGACTGCTGTGCCCTCATCTCCGACTCTGCAGTCTTTTGCCCAAGCTCCGACGCGCCCGCAACCAGTCAAA TATGCTAGTCGAGAGGATCCGGTTAATGCGACGAGCGACAAGGCGACGATTGCTCTAATTCGACGCATCCTATGT CCCCAAGCTGGTAACCATGGGGGTGCCACTACTCCTCAACCTCCGGAAGATCTGCTGCCTCCCCTGACGAGCTCA AATGAGGTAGATCGTCAGCTTTATGCGCTTATTGCCATCATCGTCAAAGAGTTTGTGTTCACCTGGTACTCAAAG ATCACTTCGGATCAGGTGCTCGTGAGCGAACTCCTTCAGGTCATTGCGCACTGCACCCGCGCTCTTGAGCAGAGG TTGCGCGAAATCGATGTTGCGCAGCTGTTTCTTGATGAGATTCCTGCTCTCGTTGAGAGGCACGTTACATGCCTC TCACCGATCCCCGACCCATCAGATGCTCAAGCTGTTGCGCAGCAAAGAGAAAACGAATCAATTTATCGACAACTA TTGGTCCACGGCATGTTAGCGGTGCTACTCCCCACGGACGACCTGGAAAATGCTTCTCTGCGAACTCTGCTCGGT GACATCCTGGCAGATCTTGTGCTGGGCAATGCAGTGGCCGGGAAAATCAGCGAAGGATGGTTCTTGTGGGACAGT ATCACGAAGGTGGTCGACAGGGTAGGGCGCAACGAACAGGAGGAGGATGTAGCGACTGCAACCCTGGGTCAACGA TCCCGACTTCACAAGTACGGTCTCCTCTCTCAAGAAGCGTTCACGGAAGGTCATTCGTCGTCCCACGTCCAAGTG CCAGTTCCCGACTGGATCTGGCAAGCGCTACAATATGCCTACATGATCTACGTGACTTTACGTTTCATTGTGATC GGCCTGTTTCGCGTTGCATCCGCACCTCCGGTTACTGCGTCCCTGACACCATGCCCTCCAACCAGCAACGCGGAC GGAACCCCCTCGTGCGCAACCTCCAAGAAGCGCCCGGTGCTGGACTACCGGTTGTATGGCATGGTCTCGCAAGTG ATGGATGTGCCGCAGCGGATGCCTTGGCTGTGTGGAATGCTCGCACTGATCCAGTATCTGATCCTGGCCGGTCCA GGTAGATTGGGTGATACGGATAGTGTTCTTGATAGGTGA |
Transcript | >Ani_SJS100_1|g3898.t1 ATGACCAGCGACCCTCTCCGCCCGGGCCTCCATCCGCTGTCGCATCTCAAAGCTGGTCCAACCACCTCCAGCTCG AAGTCGACTGCTGTGCCCTCATCTCCGACTCTGCAGTCTTTTGCCCAAGCTCCGACGCGCCCGCAACCAGTCAAA TATGCTAGTCGAGAGGATCCGGTTAATGCGACGAGCGACAAGGCGACGATTGCTCTAATTCGACGCATCCTATGT CCCCAAGCTGGTAACCATGGGGGTGCCACTACTCCTCAACCTCCGGAAGATCTGCTGCCTCCCCTGACGAGCTCA AATGAGGTAGATCGTCAGCTTTATGCGCTTATTGCCATCATCGTCAAAGAGTTTGTGTTCACCTGGTACTCAAAG ATCACTTCGGATCAGGTGCTCGTGAGCGAACTCCTTCAGGTCATTGCGCACTGCACCCGCGCTCTTGAGCAGAGG TTGCGCGAAATCGATGTTGCGCAGCTGTTTCTTGATGAGATTCCTGCTCTCGTTGAGAGGCACGTTACATGCCTC TCACCGATCCCCGACCCATCAGATGCTCAAGCTGTTGCGCAGCAAAGAGAAAACGAATCAATTTATCGACAACTA TTGGTCCACGGCATGTTAGCGGTGCTACTCCCCACGGACGACCTGGAAAATGCTTCTCTGCGAACTCTGCTCGGT GACATCCTGGCAGATCTTGTGCTGGGCAATGCAGTGGCCGGGAAAATCAGCGAAGGATGGTTCTTGTGGGACAGT ATCACGAAGGTGGTCGACAGGGTAGGGCGCAACGAACAGGAGGAGGATGTAGCGACTGCAACCCTGGGTCAACGA TCCCGACTTCACAAGTACGGTCTCCTCTCTCAAGAAGCGTTCACGGAAGGTCATTCGTCGTCCCACGTCCAAGTG CCAGTTCCCGACTGGATCTGGCAAGCGCTACAATATGCCTACATGATCTACGTGACTTTACGTTTCATTGTGATC GGCCTGTTTCGCGTTGCATCCGCACCTCCGGTTACTGCGTCCCTGACACCATGCCCTCCAACCAGCAACGCGGAC GGAACCCCCTCGTGCGCAACCTCCAAGAAGCGCCCGGTGCTGGACTACCGGTTGTATGGCATGGTCTCGCAAGTG ATGGATGTGCCGCAGCGGATGCCTTGGCTGTGTGGAATGCTCGCACTGATCCAGTATCTGATCCTGGCCGGTCCA GGTAGATTGGGTGATACGGATAGTGTTCTTGATAGGTGA |
Gene | >Ani_SJS100_1|g3898.t1 ATGACCAGCGACCCTCTCCGCCCGGGCCTCCATCCGCTGTCGCATCTCAAAGCTGGTCCAACCACCTCCAGCTCG AAGTCGACTGCTGTGCCCTCATCTCCGACTCTGCAGTCTTTTGCCCAAGCTCCGACGCGCCCGCAACCAGTCAAA TATGCTAGTCGAGAGGATCCGGTTAATGCGACGAGCGACAAGGCGACGATTGCTCTAATTCGACGCATCCTATGT CCCCAAGCTGGTAACCATGGGGGTGCCACTACTCCTCAACCTCCGGAAGATCTGCTGCCTCCCCTGACGAGCTCA AATGAGGTAGATCGTCAGCTTTATGCGCTTATTGCCATCATCGTCAAAGAGTTTGTGTTCACCTGGTACTCAAAG ATCACTTCGGATCAGGTGCTCGTGAGCGAACTCCTTCAGGTCATTGCGCACTGCACCCGCGCTCTTGAGCAGAGG TTGCGCGAAATCGATGTTGCGCAGCTGTTTCTTGATGAGATTCCTGCTCTCGTTGAGAGGCACGTTACATGTAAG ACCTTGCGTCCTGTCCAACGTCCACTAAGGGTTGCATGAGTGCATGAGCTGACCGCGCCCTCGGTCGTCCATAGC ATATAGACTAGCAAAGCAGCAATCAGCACAATCTTCGATATCTCCTCCGCTCCGCGAGATTTATCATGCTCTAAA TCCGCATCCAGGCCTCTCACCGATCCCCGACCCATCAGATGCTCAAGCTGTTGCGCAGCAAAGAGAAAACGAATC AATTTATCGACAACTATTGGTCCACGGCATGTTAGCGGTGCTACTCCCCACGGACGACCTGGAAAATGCTTCTCT GCGAACTCTGCTCGGTGACATCCTGGCAGATCTTGTGCTGGGCAATGCAGTGGCCGGGAAAATCAGCGAAGGATG GTTCTTGTGGGACAGTATCACGAAGGTGGTCGACAGGGTAGGGCGCAACGAACAGGAGGAGGATGTAGCGACTGC AACCCTGGGTCAACGATCCCGACTTCACAAGTACGGTCTCCTCTCTCAAGAAGCGTTCACGGAAGGTCATTCGTC GTCCCACGTCCAAGTGCCAGTTCCCGACTGGATCTGGCAAGCGCTACAATATGCCTACATGATCTACGTGACTTT ACGTTTCATTGTGATCGGCCTGTTTCGCGTTGCATCCGCACCTCCGGTTACTGCGTCCCTGACACCATGCCCTCC AACCAGCAACGCGGACGGAACCCCCTCGTGCGCAACCTCCAAGAAGCGCCCGGTGCTGGACTACCGGTTGTATGG CATGGTCTCGCAAGTGATGGATGTGCCGCAGCGGATGCCTTGGCTGTGTGGAATGCTCGCACTGATCCAGTATCT GATCCTGGCCGGTCCAGGTAGATTGGGTGATACGGATAGTGTTCTTGATAGGTGA |